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The map label for this gene is 153936280

Identifier: 153936280

GI number: 153936280

Start: 2088294

End: 2089433

Strand: Reverse

Name: 153936280

Synonym: CLC_1965

Alternate gene names: NA

Gene position: 2089433-2088294 (Counterclockwise)

Preceding gene: 153934927

Following gene: 153936887

Centisome position: 55.56

GC content: 33.33

Gene sequence:

>1140_bases
ATGAAGATACCATATGTTATGACACCAGGTCCTACCATGGTAAGAGAAAATGTTAGAATGGCAAGGGTTATGGAAACAAC
AAACCCAGATTTAGATTTACAATTTTATGATTATTATAAAGAAACCTGTGAAAAAATAGGGGGATTTTTAAAGACTAGAA
ATGAGGTAAGAATATTAAGCGGAGAGGGTATACTAGGTTTGGAAGCAACTTGTGCTTCATTAACAGAAAAAGGTGACAGA
ATTCTTGTAATTGACAATGGAATTTTTGGCGAAGGTTTTGCAGATTTTGTAGAAATATATGGGGGAGAAGCAGTGTTTTT
TAAAGGAGATAGAAAAAGAGATATAGATATAGAAAAGTTGAAAGAATTTCTAGAAAAGGATAGTGACTTTAAATATGCTA
CTGTTGTACACTGTGATACTCCCTCAGGGGTTATTAATGATGTATCAAAAATATGTCCAATGCTTAAAGAAAAGGGCATA
ATAACTGTAGTAGATTCTGTATCTGCCATGGGTGGACAGGAGCTAAAGGTAGATGAATGGAAAATAGACATGGTACTTGG
TGGATCTCAAAAATGTATGTCAGCCCCTCCAGGACTTTCATTTCTTAGTATAAGTGAAGATGCCTTTAAAACTATGGAAG
AAAGAAGAACACCTATAGCATCATATTACTGTAATCTCCTTGTATGGAAGGATTATTATAAAAATAAATGGTTCCCATAC
ACTCCACCTATAAGTGATATAGTTGGGCTAAGAGTAGCGGTGGATAATATTTTAAAGGATAGAGACATTCTATCAAGACA
CAATAATATAGCAAAAGCTTGTAGAGAGGCTATAGTAGAGAGTGGACTTAAGCTTTATTTAGAAAAGGGTTATTCTAACA
CTGTTACTGTTATAGAACTACCTAAAGAAATAGAGGATAAAGCATTAAGAACATATATGCAGGATAAATACAATGTAATC
ATAGCAGGTTCCTTTGGATATCTTCATGGTAAGGTTATAAGAATAGGTCATATGGGTGAAAATGCTAAAGTGGATAAAAT
GGCCTATACATTATTTGCACTTAGAAATAGCTTAGAGCATTTAGGATACAAACTAAGAGTTAATATTGGAGAAGTTTTCT
TACAAAAAGTTATGGAGTAA

Upstream 100 bases:

>100_bases
AAAATGTAAAACTGCTTAAAATGCAGGGATACACTTTTAGTTATAGAATAAGTGGAATATAATTCTACTTAGATATGTTT
AAGTAGGAGGATTTGATTTT

Downstream 100 bases:

>100_bases
GAGTGAATATTATTATTTCAAAAATTATCATTTTTGATCTTATATTAGCCATAATTTATTTTGTACAAGGACTTAAAAAC
TCAAGAGAAAATAGATAAGA

Product: aminotransferase, class V

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKIPYVMTPGPTMVRENVRMARVMETTNPDLDLQFYDYYKETCEKIGGFLKTRNEVRILSGEGILGLEATCASLTEKGDR
ILVIDNGIFGEGFADFVEIYGGEAVFFKGDRKRDIDIEKLKEFLEKDSDFKYATVVHCDTPSGVINDVSKICPMLKEKGI
ITVVDSVSAMGGQELKVDEWKIDMVLGGSQKCMSAPPGLSFLSISEDAFKTMEERRTPIASYYCNLLVWKDYYKNKWFPY
TPPISDIVGLRVAVDNILKDRDILSRHNNIAKACREAIVESGLKLYLEKGYSNTVTVIELPKEIEDKALRTYMQDKYNVI
IAGSFGYLHGKVIRIGHMGENAKVDKMAYTLFALRNSLEHLGYKLRVNIGEVFLQKVME

Sequences:

>Translated_379_residues
MKIPYVMTPGPTMVRENVRMARVMETTNPDLDLQFYDYYKETCEKIGGFLKTRNEVRILSGEGILGLEATCASLTEKGDR
ILVIDNGIFGEGFADFVEIYGGEAVFFKGDRKRDIDIEKLKEFLEKDSDFKYATVVHCDTPSGVINDVSKICPMLKEKGI
ITVVDSVSAMGGQELKVDEWKIDMVLGGSQKCMSAPPGLSFLSISEDAFKTMEERRTPIASYYCNLLVWKDYYKNKWFPY
TPPISDIVGLRVAVDNILKDRDILSRHNNIAKACREAIVESGLKLYLEKGYSNTVTVIELPKEIEDKALRTYMQDKYNVI
IAGSFGYLHGKVIRIGHMGENAKVDKMAYTLFALRNSLEHLGYKLRVNIGEVFLQKVME
>Mature_379_residues
MKIPYVMTPGPTMVRENVRMARVMETTNPDLDLQFYDYYKETCEKIGGFLKTRNEVRILSGEGILGLEATCASLTEKGDR
ILVIDNGIFGEGFADFVEIYGGEAVFFKGDRKRDIDIEKLKEFLEKDSDFKYATVVHCDTPSGVINDVSKICPMLKEKGI
ITVVDSVSAMGGQELKVDEWKIDMVLGGSQKCMSAPPGLSFLSISEDAFKTMEERRTPIASYYCNLLVWKDYYKNKWFPY
TPPISDIVGLRVAVDNILKDRDILSRHNNIAKACREAIVESGLKLYLEKGYSNTVTVIELPKEIEDKALRTYMQDKYNVI
IAGSFGYLHGKVIRIGHMGENAKVDKMAYTLFALRNSLEHLGYKLRVNIGEVFLQKVME

Specific function: Unknown

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557289, Length=364, Percent_Identity=26.3736263736264, Blast_Score=133, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17536281, Length=310, Percent_Identity=28.0645161290323, Blast_Score=128, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6321079, Length=366, Percent_Identity=26.775956284153, Blast_Score=105, Evalue=9e-24,
Organism=Drosophila melanogaster, GI17530823, Length=379, Percent_Identity=27.4406332453826, Blast_Score=144, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: 2.6.1.-

Molecular weight: Translated: 42899; Mature: 42899

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS00595 AA_TRANSFER_CLASS_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPYVMTPGPTMVRENVRMARVMETTNPDLDLQFYDYYKETCEKIGGFLKTRNEVRILS
CCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
GEGILGLEATCASLTEKGDRILVIDNGIFGEGFADFVEIYGGEAVFFKGDRKRDIDIEKL
CCCEEEHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCCCHHHH
KEFLEKDSDFKYATVVHCDTPSGVINDVSKICPMLKEKGIITVVDSVSAMGGQELKVDEW
HHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCEEEEEE
KIDMVLGGSQKCMSAPPGLSFLSISEDAFKTMEERRTPIASYYCNLLVWKDYYKNKWFPY
EEEEEECCCHHHCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHEEEEHHHCCCCCCC
TPPISDIVGLRVAVDNILKDRDILSRHNNIAKACREAIVESGLKLYLEKGYSNTVTVIEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEEEEEC
PKEIEDKALRTYMQDKYNVIIAGSFGYLHGKVIRIGHMGENAKVDKMAYTLFALRNSLEH
CHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
LGYKLRVNIGEVFLQKVME
CCEEEEEEHHHHHHHHHCC
>Mature Secondary Structure
MKIPYVMTPGPTMVRENVRMARVMETTNPDLDLQFYDYYKETCEKIGGFLKTRNEVRILS
CCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
GEGILGLEATCASLTEKGDRILVIDNGIFGEGFADFVEIYGGEAVFFKGDRKRDIDIEKL
CCCEEEHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCCCHHHH
KEFLEKDSDFKYATVVHCDTPSGVINDVSKICPMLKEKGIITVVDSVSAMGGQELKVDEW
HHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCEEEEEE
KIDMVLGGSQKCMSAPPGLSFLSISEDAFKTMEERRTPIASYYCNLLVWKDYYKNKWFPY
EEEEEECCCHHHCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHEEEEHHHCCCCCCC
TPPISDIVGLRVAVDNILKDRDILSRHNNIAKACREAIVESGLKLYLEKGYSNTVTVIEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEEEEEC
PKEIEDKALRTYMQDKYNVIIAGSFGYLHGKVIRIGHMGENAKVDKMAYTLFALRNSLEH
CHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
LGYKLRVNIGEVFLQKVME
CCEEEEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]