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The map label for this gene is mcp1 [H]

Identifier: 153936001

GI number: 153936001

Start: 593790

End: 595814

Strand: Direct

Name: mcp1 [H]

Synonym: CLC_0582

Alternate gene names: 153936001

Gene position: 593790-595814 (Clockwise)

Preceding gene: 153936518

Following gene: 153935070

Centisome position: 15.79

GC content: 27.56

Gene sequence:

>2025_bases
ATGAAATTTAAAAATACTAAGGATAAAAATTTTATAAGTGTAAAAAGTGTTATAAATATACAAATATTAGGTTTGATTAT
TTTGATTTGTGGGATCTTAGGAATTGTGTCCTATAAGAGTGCTTCTAAAGCTCTAACTAAAAATATTAAAATGGAACTTG
AAAATAAGGCCAAAAATGGATCAACTATCTTGGGTAATAGAATGAATGAAGTAAAGGAGAGATTACAAATAATAGCCAAT
TGGCCAGAAATAAAATCTATGGATTTAAAAAATCAAAAGTACCAATTGGAAGATGAAGCTAAATCCTGGGGATTTAAAGA
TTTTAAAATAGTAAATTTACAAGGTAATCAATATACTATGAATAGCAATGAAATAGAAAATATTTCTGGAAAGGGATACT
TTAATAGGATATTAAAAGGAGATACATTTATAATAGATAGTGATATAGATAAGAACACTAATGTTCCTTTAATAAAAGTA
GTTGTGCCTATTAAATCCAATGATGAAAAAGTAGTAGGTGCTTTAATAGGTTCTTTAGATATAAAAGATATAAATAAGTT
AGTAAATGATGCAAAATCAAATGATAAAGAAGAAATCGGTTTTGTAATTAATAAAGAAGGATATTATATAGCAGATGGTG
ATATTAATTTAGTTTTAAAAAGAGGCAATGATTTAAAAAATTATAGTAATGATCCAAAGTTTGTAGAACTTTTAAATTTT
CAGAAAAAAATGATTAATGGAGAAAATGGCTTTGGAGAATATAAATACAATAATATTAGAAGATTTATGGCTTATGTGCC
AGTTCCAGGCACAGAATGGTCTATGGCTATAGCTGTTGAAAAAAATTATTTGTTTAAAGATATATATACGCTAAGAATAG
TAATATTAATTTCAACTATTTTATTTATAATTTTAGGTATAATAATATCCAATATTATTTCTAAAAATATTAAAGATCCC
CTTGTTAAAATGAAAGAACATGCAGAGCAATTAGAAAAGTGTAATTTAACATATAAAAATTCTATTAATAGAAAAGATGA
ATTTGGGGAAACAGCTAGAGCTTTAAATGAAGCTAGCAATATATTAAATCAAACTATAAATTCTGTAAAGGATGAAAGCC
AAAATATATTACAAAGCAGTAATTGTGCAAAAGAAACTTTTGATAAGGTAAATGCTGAGGTACAACAAATAACTGCATTT
ACTGAAGAGATTTCTGCTAATATGGAGGAATCTTCAGCTGGAATAGAAGAGATGGCATCTATGACTGCTTCTGTTAAAGA
AGATATGAGTATTACTAAGAAAAAAGCAAAAGAAGGACTTGATTTAGCAATAAACATTAAGGAAAAGGCAGAAAGTGTAA
ATGAAGATGCTTGTAGTTCAATGAGTGAAGTGGAAAAAATATATGAAAATTCAAAGGAAAAATTAGAAAAAGCTATTCGT
GAAGCTCAAGTTGTAGAAAATATATCTGAAATGGCTGAAAGTATTTTAGGTATAGCTGAAAAGACAAACCTATTAGCTTT
AAATGCAGCTATTGAGGCTGCTAGAGCAGGAGAACAGGGCAGAGGCTTTGCAGTAGTAGCAGAAGAAGTAAGAAAATTAG
CAGAGCAATCTTCTAATGCAGTTGAAAATATCCAAGTTAATGTTAAGACTGTATTAAAAGCAGTAAGTGAGCTTTCATCT
TCTTCCGAATTTGTTTTGGAACTTATAGAAGAGAACGTATTAAAAGATTATAAAAAGCTTATAGATGTGAGTGTACAGTA
TAAAAATGATGGAAATATTGTTAAAGAGTTGATTGAGAATTTTTCAAATTTATCAGAAAAGACTTCTAAAGCTATTGAAC
AAATAGCAGTAGGTATGGAAGGAATGTCAGGATCTGTAATAGAAGTAGCAGAATCTTCAGGTGAAATTGCGGAAAAAATA
AGCAATGTAAATCAACAAAATGAGTCAATATTGCAAGAAAATGAAAAAAATTTAGAAATATCACAACAATTAGTGAATAC
AATGAATGAATTTCAAAGTATTTAG

Upstream 100 bases:

>100_bases
AAATATTGGAATTATTTATTAAAAAAATATATATAAATTCTTTTAATTTACAATTATGTATATAGCTAGTCAATAGCTAT
ATATAACGAGGAGGAAATTT

Downstream 100 bases:

>100_bases
AGGTATATAATATAAAATTAAGATAAAGTTATAAACAATATTTTATGTATTGTTTATAACTTTATTTTTACAAAAAAATT
GAATAATATATATATATTTG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 674; Mature: 674

Protein sequence:

>674_residues
MKFKNTKDKNFISVKSVINIQILGLIILICGILGIVSYKSASKALTKNIKMELENKAKNGSTILGNRMNEVKERLQIIAN
WPEIKSMDLKNQKYQLEDEAKSWGFKDFKIVNLQGNQYTMNSNEIENISGKGYFNRILKGDTFIIDSDIDKNTNVPLIKV
VVPIKSNDEKVVGALIGSLDIKDINKLVNDAKSNDKEEIGFVINKEGYYIADGDINLVLKRGNDLKNYSNDPKFVELLNF
QKKMINGENGFGEYKYNNIRRFMAYVPVPGTEWSMAIAVEKNYLFKDIYTLRIVILISTILFIILGIIISNIISKNIKDP
LVKMKEHAEQLEKCNLTYKNSINRKDEFGETARALNEASNILNQTINSVKDESQNILQSSNCAKETFDKVNAEVQQITAF
TEEISANMEESSAGIEEMASMTASVKEDMSITKKKAKEGLDLAINIKEKAESVNEDACSSMSEVEKIYENSKEKLEKAIR
EAQVVENISEMAESILGIAEKTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSSNAVENIQVNVKTVLKAVSELSS
SSEFVLELIEENVLKDYKKLIDVSVQYKNDGNIVKELIENFSNLSEKTSKAIEQIAVGMEGMSGSVIEVAESSGEIAEKI
SNVNQQNESILQENEKNLEISQQLVNTMNEFQSI

Sequences:

>Translated_674_residues
MKFKNTKDKNFISVKSVINIQILGLIILICGILGIVSYKSASKALTKNIKMELENKAKNGSTILGNRMNEVKERLQIIAN
WPEIKSMDLKNQKYQLEDEAKSWGFKDFKIVNLQGNQYTMNSNEIENISGKGYFNRILKGDTFIIDSDIDKNTNVPLIKV
VVPIKSNDEKVVGALIGSLDIKDINKLVNDAKSNDKEEIGFVINKEGYYIADGDINLVLKRGNDLKNYSNDPKFVELLNF
QKKMINGENGFGEYKYNNIRRFMAYVPVPGTEWSMAIAVEKNYLFKDIYTLRIVILISTILFIILGIIISNIISKNIKDP
LVKMKEHAEQLEKCNLTYKNSINRKDEFGETARALNEASNILNQTINSVKDESQNILQSSNCAKETFDKVNAEVQQITAF
TEEISANMEESSAGIEEMASMTASVKEDMSITKKKAKEGLDLAINIKEKAESVNEDACSSMSEVEKIYENSKEKLEKAIR
EAQVVENISEMAESILGIAEKTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSSNAVENIQVNVKTVLKAVSELSS
SSEFVLELIEENVLKDYKKLIDVSVQYKNDGNIVKELIENFSNLSEKTSKAIEQIAVGMEGMSGSVIEVAESSGEIAEKI
SNVNQQNESILQENEKNLEISQQLVNTMNEFQSI
>Mature_674_residues
MKFKNTKDKNFISVKSVINIQILGLIILICGILGIVSYKSASKALTKNIKMELENKAKNGSTILGNRMNEVKERLQIIAN
WPEIKSMDLKNQKYQLEDEAKSWGFKDFKIVNLQGNQYTMNSNEIENISGKGYFNRILKGDTFIIDSDIDKNTNVPLIKV
VVPIKSNDEKVVGALIGSLDIKDINKLVNDAKSNDKEEIGFVINKEGYYIADGDINLVLKRGNDLKNYSNDPKFVELLNF
QKKMINGENGFGEYKYNNIRRFMAYVPVPGTEWSMAIAVEKNYLFKDIYTLRIVILISTILFIILGIIISNIISKNIKDP
LVKMKEHAEQLEKCNLTYKNSINRKDEFGETARALNEASNILNQTINSVKDESQNILQSSNCAKETFDKVNAEVQQITAF
TEEISANMEESSAGIEEMASMTASVKEDMSITKKKAKEGLDLAINIKEKAESVNEDACSSMSEVEKIYENSKEKLEKAIR
EAQVVENISEMAESILGIAEKTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSSNAVENIQVNVKTVLKAVSELSS
SSEFVLELIEENVLKDYKKLIDVSVQYKNDGNIVKELIENFSNLSEKTSKAIEQIAVGMEGMSGSVIEVAESSGEIAEKI
SNVNQQNESILQENEKNLEISQQLVNTMNEFQSI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=314, Percent_Identity=26.7515923566879, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1787690, Length=359, Percent_Identity=26.4623955431755, Blast_Score=99, Evalue=9e-22,
Organism=Escherichia coli, GI1789453, Length=274, Percent_Identity=29.9270072992701, Blast_Score=97, Evalue=5e-21,
Organism=Escherichia coli, GI2367378, Length=278, Percent_Identity=28.4172661870504, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI1788194, Length=259, Percent_Identity=28.957528957529, Blast_Score=86, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 75336; Mature: 75336

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKNTKDKNFISVKSVINIQILGLIILICGILGIVSYKSASKALTKNIKMELENKAKNG
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
STILGNRMNEVKERLQIIANWPEIKSMDLKNQKYQLEDEAKSWGFKDFKIVNLQGNQYTM
CEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCEEEC
NSNEIENISGKGYFNRILKGDTFIIDSDIDKNTNVPLIKVVVPIKSNDEKVVGALIGSLD
CCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCC
IKDINKLVNDAKSNDKEEIGFVINKEGYYIADGDINLVLKRGNDLKNYSNDPKFVELLNF
HHHHHHHHHHHCCCCCHHCCEEECCCCEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHH
QKKMINGENGFGEYKYNNIRRFMAYVPVPGTEWSMAIAVEKNYLFKDIYTLRIVILISTI
HHHHHCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH
LFIILGIIISNIISKNIKDPLVKMKEHAEQLEKCNLTYKNSINRKDEFGETARALNEASN
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHH
ILNQTINSVKDESQNILQSSNCAKETFDKVNAEVQQITAFTEEISANMEESSAGIEEMAS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHH
MTASVKEDMSITKKKAKEGLDLAINIKEKAESVNEDACSSMSEVEKIYENSKEKLEKAIR
HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHH
EAQVVENISEMAESILGIAEKTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSSNA
HHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
VENIQVNVKTVLKAVSELSSSSEFVLELIEENVLKDYKKLIDVSVQYKNDGNIVKELIEN
HHHHEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHH
FSNLSEKTSKAIEQIAVGMEGMSGSVIEVAESSGEIAEKISNVNQQNESILQENEKNLEI
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCCCHHH
SQQLVNTMNEFQSI
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKFKNTKDKNFISVKSVINIQILGLIILICGILGIVSYKSASKALTKNIKMELENKAKNG
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
STILGNRMNEVKERLQIIANWPEIKSMDLKNQKYQLEDEAKSWGFKDFKIVNLQGNQYTM
CEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCEEEC
NSNEIENISGKGYFNRILKGDTFIIDSDIDKNTNVPLIKVVVPIKSNDEKVVGALIGSLD
CCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCC
IKDINKLVNDAKSNDKEEIGFVINKEGYYIADGDINLVLKRGNDLKNYSNDPKFVELLNF
HHHHHHHHHHHCCCCCHHCCEEECCCCEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHH
QKKMINGENGFGEYKYNNIRRFMAYVPVPGTEWSMAIAVEKNYLFKDIYTLRIVILISTI
HHHHHCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH
LFIILGIIISNIISKNIKDPLVKMKEHAEQLEKCNLTYKNSINRKDEFGETARALNEASN
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHH
ILNQTINSVKDESQNILQSSNCAKETFDKVNAEVQQITAFTEEISANMEESSAGIEEMAS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHH
MTASVKEDMSITKKKAKEGLDLAINIKEKAESVNEDACSSMSEVEKIYENSKEKLEKAIR
HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHH
EAQVVENISEMAESILGIAEKTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSSNA
HHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
VENIQVNVKTVLKAVSELSSSSEFVLELIEENVLKDYKKLIDVSVQYKNDGNIVKELIEN
HHHHEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHH
FSNLSEKTSKAIEQIAVGMEGMSGSVIEVAESSGEIAEKISNVNQQNESILQENEKNLEI
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCCCHHH
SQQLVNTMNEFQSI
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]