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The map label for this gene is 153935887

Identifier: 153935887

GI number: 153935887

Start: 2310642

End: 2311073

Strand: Direct

Name: 153935887

Synonym: CLC_2173

Alternate gene names: NA

Gene position: 2310642-2311073 (Clockwise)

Preceding gene: 153937805

Following gene: 153937464

Centisome position: 61.44

GC content: 25.93

Gene sequence:

>432_bases
ATGAAATACGATTGTTTTGAAATAGCAATGCTTATAAAAGAAGTGTATGCAAGTACAATGGGAATAGTCAGCAATAGTTT
AAAAGATAGTGGATTTACCCATCAGCAAATTATGGTTATAAAATTAATTGCACATAATGGACAAGTTAATATATCCCAAT
TATGCGATGAAATATCCTTGGCTAAAGGTACTGTTTCTGGTATAGTTACAAGATTAGAAAGTGCTGGCTACGTAAAAAAA
ATTAAAAATGAAAATGATAAAAGGAATACCTATGTTACATTTTCAGATAAAGGATTAAAATTTGCAAAGGAATTCAGAGA
AGAAATTAATAAAAGCTTTGATAAAATATTTAGTAACTTTACAGATGAAGAAATAATGGAATTAAGAAATAATCTAATAA
AAGTAAGAAATAAAATTAAAGGAGATAATTAA

Upstream 100 bases:

>100_bases
AACTTTACTATTAATAGCAGGACTCTCTTTCTTAATAAGCTCATTAAAATTTGAAAATACTATATTAAAATATAAAAATT
AAAATCGGAGGAAATTTGAT

Downstream 100 bases:

>100_bases
TAATGGATGGGAAATTAGTTTTTGCAATTGTTACAATAACTTTAGCTCTAGCATTCTATACTGCAGGGGTATGGTCTGAA
AGAAAATCTAATACATTAAA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; MarR Family Regulatory Protein; Transcriptional Regulator TrmB

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKYDCFEIAMLIKEVYASTMGIVSNSLKDSGFTHQQIMVIKLIAHNGQVNISQLCDEISLAKGTVSGIVTRLESAGYVKK
IKNENDKRNTYVTFSDKGLKFAKEFREEINKSFDKIFSNFTDEEIMELRNNLIKVRNKIKGDN

Sequences:

>Translated_143_residues
MKYDCFEIAMLIKEVYASTMGIVSNSLKDSGFTHQQIMVIKLIAHNGQVNISQLCDEISLAKGTVSGIVTRLESAGYVKK
IKNENDKRNTYVTFSDKGLKFAKEFREEINKSFDKIFSNFTDEEIMELRNNLIKVRNKIKGDN
>Mature_143_residues
MKYDCFEIAMLIKEVYASTMGIVSNSLKDSGFTHQQIMVIKLIAHNGQVNISQLCDEISLAKGTVSGIVTRLESAGYVKK
IKNENDKRNTYVTFSDKGLKFAKEFREEINKSFDKIFSNFTDEEIMELRNNLIKVRNKIKGDN

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16324; Mature: 16324

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYDCFEIAMLIKEVYASTMGIVSNSLKDSGFTHQQIMVIKLIAHNGQVNISQLCDEISL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
AKGTVSGIVTRLESAGYVKKIKNENDKRNTYVTFSDKGLKFAKEFREEINKSFDKIFSNF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
TDEEIMELRNNLIKVRNKIKGDN
CHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKYDCFEIAMLIKEVYASTMGIVSNSLKDSGFTHQQIMVIKLIAHNGQVNISQLCDEISL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
AKGTVSGIVTRLESAGYVKKIKNENDKRNTYVTFSDKGLKFAKEFREEINKSFDKIFSNF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
TDEEIMELRNNLIKVRNKIKGDN
CHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA