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The map label for this gene is panD

Identifier: 153935836

GI number: 153935836

Start: 490266

End: 490649

Strand: Reverse

Name: panD

Synonym: CLC_0489

Alternate gene names: 153935836

Gene position: 490649-490266 (Counterclockwise)

Preceding gene: 153934894

Following gene: 153935017

Centisome position: 13.05

GC content: 27.34

Gene sequence:

>384_bases
ATGACAATAACAATGTTAAAATCTAAAATTCATAGAGCTACTGTAACAGAAGCTAATCTTAACTATGTAGGAAGTATAAC
TATAGACAAATATTTAATGGATAAAGCTAATATTTTAGAATATGAAAAAGTTCAAATAGTGGATATAGATAATGGAAATA
GATTTGAAACCTATGTAATAGCTGGTGAAAAACATAGTGATGTAATCTGTCTAAATGGTGCTGCTGCACGAATGGTTCAA
AAGGGCGATAAAATTATAATAATGAGTTACTGCAGTCTAACTATAGATGAAGCTAACAAATTTAATCCTACAGTACTATT
TGTAGACAATAAAAATAATATAGAGAAATTAACCAACTACGAAAAACATGGAGAAATAATATAA

Upstream 100 bases:

>100_bases
GTCATCGGATAAATATTTTTTGAACGCTAATCTATTATTAATAATAAATACGGCATATTGTAAAGTTATACACCAAATGC
CTAAAGTGAGGTATAAACAA

Downstream 100 bases:

>100_bases
TTGTTTTTATTAATATTTTCCTAAAACTCATAATTTAGTTATTTTTGCAAATACTAACATTGTAAAACTAATAAAGGAGA
GGAAAATATGAAAACATTAG

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTITMLKSKIHRATVTEANLNYVGSITIDKYLMDKANILEYEKVQIVDIDNGNRFETYVIAGEKHSDVICLNGAAARMVQ
KGDKIIIMSYCSLTIDEANKFNPTVLFVDNKNNIEKLTNYEKHGEII

Sequences:

>Translated_127_residues
MTITMLKSKIHRATVTEANLNYVGSITIDKYLMDKANILEYEKVQIVDIDNGNRFETYVIAGEKHSDVICLNGAAARMVQ
KGDKIIIMSYCSLTIDEANKFNPTVLFVDNKNNIEKLTNYEKHGEII
>Mature_126_residues
TITMLKSKIHRATVTEANLNYVGSITIDKYLMDKANILEYEKVQIVDIDNGNRFETYVIAGEKHSDVICLNGAAARMVQK
GDKIIIMSYCSLTIDEANKFNPTVLFVDNKNNIEKLTNYEKHGEII

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=116, Percent_Identity=42.2413793103448, Blast_Score=103, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_CLOB1 (A7FR58)

Other databases:

- EMBL:   CP000726
- RefSeq:   YP_001382807.1
- ProteinModelPortal:   A7FR58
- SMR:   A7FR58
- STRING:   A7FR58
- GeneID:   5396385
- GenomeReviews:   CP000726_GR
- KEGG:   cba:CLB_0456
- eggNOG:   COG0853
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- ProtClustDB:   PRK05449
- BioCyc:   CBOT441770:CLB_0456-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 14389; Mature: 14258

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITMLKSKIHRATVTEANLNYVGSITIDKYLMDKANILEYEKVQIVDIDNGNRFETYVI
CEEEEEHHHHHHEEEEECCCCEEEEEEEHHHHCCCCCCEEECEEEEEECCCCCEEEEEEE
AGEKHSDVICLNGAAARMVQKGDKIIIMSYCSLTIDEANKFNPTVLFVDNKNNIEKLTNY
ECCCCCCEEEECCHHHHHHHCCCEEEEEEEEEEEECCCCCCCCEEEEEECCCCHHHHCCC
EKHGEII
CCCCCCC
>Mature Secondary Structure 
TITMLKSKIHRATVTEANLNYVGSITIDKYLMDKANILEYEKVQIVDIDNGNRFETYVI
EEEEEHHHHHHEEEEECCCCEEEEEEEHHHHCCCCCCEEECEEEEEECCCCCEEEEEEE
AGEKHSDVICLNGAAARMVQKGDKIIIMSYCSLTIDEANKFNPTVLFVDNKNNIEKLTNY
ECCCCCCEEEECCHHHHHHHCCCEEEEEEEEEEEECCCCCCCCEEEEEECCCCHHHHCCC
EKHGEII
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA