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The map label for this gene is pncA [H]

Identifier: 153935821

GI number: 153935821

Start: 1221883

End: 1222443

Strand: Direct

Name: pncA [H]

Synonym: CLC_1183

Alternate gene names: 153935821

Gene position: 1221883-1222443 (Clockwise)

Preceding gene: 153935069

Following gene: 153936567

Centisome position: 32.49

GC content: 25.67

Gene sequence:

>561_bases
ATGTTTAAGTCAATACTTATAATAGACTGCCAAAATGATTTCATATCAGGTTCACTGGCTTGTGATAATGGAGAGATAGC
TGTTAAAAACATTATAAATTTATTAAATATAAATAAAGATTTAAAAGTATTTTACTCTTTAGATTGGCATAGTGAAAATA
ATAAATCTTTTAAAATAAATGGTGGTATATGGCCAGTACATTGTGTAGTCAATAGATTTGGTGCTAAACTAGAGGAGAGT
TTTTATAAAGAATTACAACATAAAAATCATTCACCTAATAATAAAAAAATATTGTTTTCAAAAGGAAAAAATGATCATAT
AGAAGAATATTCAGCCTATGAAGGAGAAAATATTTTAGGTAATAAGATTAATGAAGTATTAGATAAGGATGTAATTGTAT
GTGGTATAGCTTCTGAGTTTTGTGTTAAAGAAACGGTAGAGGACTTAATTAGAAATGGATTTAATGTGGAATTATATATA
GATGGGGTAGCATATGTAAATAAAAAAGAACATGAAAAAACTTTAAATAATTTAAGAGAGCAGGGGGCTAAATTTATTTA
A

Upstream 100 bases:

>100_bases
AACATATATTTTTAAGAATTCATTAAAGTATAAGGGTTATATAATATTTTAAAGATAATTATATGAAAATTAAAATTTTA
GCTAAAGAAAGGGAATAGTT

Downstream 100 bases:

>100_bases
AGTATAATTTTTAAAATTTAGGCTAAAAATTTGATTGAGGGTATATTATAAAATTATCATTAATATTTGTAGAGCTTTTC
CCAATTTAGTTTAAATTAAT

Product: putative pyrazinamidase/nicotinamidase

Products: NA

Alternate protein names: PZAase; Nicotine deamidase; NAMase [H]

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MFKSILIIDCQNDFISGSLACDNGEIAVKNIINLLNINKDLKVFYSLDWHSENNKSFKINGGIWPVHCVVNRFGAKLEES
FYKELQHKNHSPNNKKILFSKGKNDHIEEYSAYEGENILGNKINEVLDKDVIVCGIASEFCVKETVEDLIRNGFNVELYI
DGVAYVNKKEHEKTLNNLREQGAKFI

Sequences:

>Translated_186_residues
MFKSILIIDCQNDFISGSLACDNGEIAVKNIINLLNINKDLKVFYSLDWHSENNKSFKINGGIWPVHCVVNRFGAKLEES
FYKELQHKNHSPNNKKILFSKGKNDHIEEYSAYEGENILGNKINEVLDKDVIVCGIASEFCVKETVEDLIRNGFNVELYI
DGVAYVNKKEHEKTLNNLREQGAKFI
>Mature_186_residues
MFKSILIIDCQNDFISGSLACDNGEIAVKNIINLLNINKDLKVFYSLDWHSENNKSFKINGGIWPVHCVVNRFGAKLEES
FYKELQHKNHSPNNKKILFSKGKNDHIEEYSAYEGENILGNKINEVLDKDVIVCGIASEFCVKETVEDLIRNGFNVELYI
DGVAYVNKKEHEKTLNNLREQGAKFI

Specific function: NAD biosynthesis; nicotinamide to NaMN; first step. [C]

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pncA family [H]

Homologues:

Organism=Escherichia coli, GI87081970, Length=195, Percent_Identity=27.6923076923077, Blast_Score=77, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6321401, Length=213, Percent_Identity=25.8215962441315, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: =3.5.1.19 [H]

Molecular weight: Translated: 21256; Mature: 21256

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKSILIIDCQNDFISGSLACDNGEIAVKNIINLLNINKDLKVFYSLDWHSENNKSFKIN
CCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEE
GGIWPVHCVVNRFGAKLEESFYKELQHKNHSPNNKKILFSKGKNDHIEEYSAYEGENILG
CCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCHH
NKINEVLDKDVIVCGIASEFCVKETVEDLIRNGFNVELYIDGVAYVNKKEHEKTLNNLRE
HHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCHHHHHHHHHHHH
QGAKFI
CCCCCC
>Mature Secondary Structure
MFKSILIIDCQNDFISGSLACDNGEIAVKNIINLLNINKDLKVFYSLDWHSENNKSFKIN
CCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEE
GGIWPVHCVVNRFGAKLEESFYKELQHKNHSPNNKKILFSKGKNDHIEEYSAYEGENILG
CCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCHH
NKINEVLDKDVIVCGIASEFCVKETVEDLIRNGFNVELYIDGVAYVNKKEHEKTLNNLRE
HHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCHHHHHHHHHHHH
QGAKFI
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2670682; 8726014; 9097039; 9278503 [H]