| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is rpmF [H]
Identifier: 153935799
GI number: 153935799
Start: 2434736
End: 2434918
Strand: Reverse
Name: rpmF [H]
Synonym: CLC_2306
Alternate gene names: 153935799
Gene position: 2434918-2434736 (Counterclockwise)
Preceding gene: 153935014
Following gene: 153936993
Centisome position: 64.75
GC content: 34.97
Gene sequence:
>183_bases GTGGGAAATCCAGCGAGAAAAACTTCAAAGGCAAAAAGAGATTCTAGAAAAGCTCAAACTTTCAAATTAAGCTTACCAGG AATCGTTGAATGCCCTCAATGTCACGAAATGAAACTTGCTCATAGAGTATGTAAAAGTTGTGGATATTACAATGGCAAAG AAGTTGTATCAAACGATAAATAA
Upstream 100 bases:
>100_bases GTTAATTTAAATTTTTCAAAATGTAAATGTGAAAAAGATATAGATCCAAGGTTGGCAAAACTAAAAGACTTTTTTTCTAC TCAGTAAGGAGGTGTTTACA
Downstream 100 bases:
>100_bases TTATAAAAAAGGAAGTCGTAAGGCTTTCTTTTTTTCTTGTTAAAGAAAAATATTTAGCTTATACTTTATATTAGAAAGGA AGTGATGTTATGATAATAGC
Product: 50S ribosomal protein L32
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MGNPARKTSKAKRDSRKAQTFKLSLPGIVECPQCHEMKLAHRVCKSCGYYNGKEVVSNDK
Sequences:
>Translated_60_residues MGNPARKTSKAKRDSRKAQTFKLSLPGIVECPQCHEMKLAHRVCKSCGYYNGKEVVSNDK >Mature_59_residues GNPARKTSKAKRDSRKAQTFKLSLPGIVECPQCHEMKLAHRVCKSCGYYNGKEVVSNDK
Specific function: Unknown
COG id: COG0333
COG function: function code J; Ribosomal protein L32
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L32P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002677 - InterPro: IPR011332 [H]
Pfam domain/function: PF01783 Ribosomal_L32p [H]
EC number: NA
Molecular weight: Translated: 6726; Mature: 6595
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 6.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNPARKTSKAKRDSRKAQTFKLSLPGIVECPQCHEMKLAHRVCKSCGYYNGKEVVSNDK CCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GNPARKTSKAKRDSRKAQTFKLSLPGIVECPQCHEMKLAHRVCKSCGYYNGKEVVSNDK CCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]