| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is ptsH [H]
Identifier: 153935791
GI number: 153935791
Start: 2370430
End: 2370687
Strand: Reverse
Name: ptsH [H]
Synonym: CLC_2244
Alternate gene names: 153935791
Gene position: 2370687-2370430 (Counterclockwise)
Preceding gene: 153935455
Following gene: 153936597
Centisome position: 63.04
GC content: 28.68
Gene sequence:
>258_bases ATGTTAGAAAGAGAATTAACTGTAAACAGTTCAACTGGTTTACATGCAAGACCAGCAACTTTATTAGTAAAAAAGGCTTC ATCCTTTAAATCAGATTTATCTATTGAATTTAATGGTAAAAAAGCCAACATAAAGAGTCTTATAGGAGTTCTTTCATTAG GAGTTACAAGTGGAGCAAAAATAAAATTAATAGCTTCTGGTGATGATGAAACCCTAGCTATAGAAGAAATCTCAAAATTA ATAAATACATTAGAATAA
Upstream 100 bases:
>100_bases TAATGGTTTATAAAAACTGTTGAAATCTGTAGAAAAAAATGGTATAATATTACGTATATGTTTTTTAAGAAACAGATAGA TTATAAAAGAGGTGGATAAA
Downstream 100 bases:
>100_bases AAATTAAGGGCTCTTTTGGGGAGCCTTTTATTTATGTTTTAAAGATCCTTTTGTTTTAAGAAGAAATAGTACCATGTTAA TTCCAGCCGCTCCGATTAAT
Product: phosphocarrier protein HPr
Products: D-sorbitol 6-phosphate [Cytoplasm]; pyruvate; alpha,alpha-trehalose 6-phosphate [Cytoplasm]; mannitol-1-phosphate [Cytoplasm]; D-glucosamine-6-phosphate [Cytoplasm]; N-acetyl-D-glucosamine-6-phosphate [Cytoplasm]; mannose-6-phosphate [Cytoplasm]; galactitol-1-phosphate [Cytoplasm]; fructose-6-phosphate [Cytoplasm]; fructose-1-phosphate [Cytoplasm]; glucose-6-phosphate [Cytoplasm]; mannitol-1-phosphate [Cytoplasm]; diacetylchitobiose-6-phosphate [Cytoplasm]; cellobiose-6-phosphate [Cytoplasm]; salicin-6-phosphate [Cytoplasm]; arbutin-6-phosphate [Cytoplasm] [C]
Alternate protein names: Histidine-containing protein [H]
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MLERELTVNSSTGLHARPATLLVKKASSFKSDLSIEFNGKKANIKSLIGVLSLGVTSGAKIKLIASGDDETLAIEEISKL INTLE
Sequences:
>Translated_85_residues MLERELTVNSSTGLHARPATLLVKKASSFKSDLSIEFNGKKANIKSLIGVLSLGVTSGAKIKLIASGDDETLAIEEISKL INTLE >Mature_85_residues MLERELTVNSSTGLHARPATLLVKKASSFKSDLSIEFNGKKANIKSLIGVLSLGVTSGAKIKLIASGDDETLAIEEISKL INTLE
Specific function: P-Ser-HPr interacts with the catabolite control protein A (CcpA), forming a complex that binds to DNA at the catabolite response elements cre, operator sites preceding a large number of catabolite-regulated genes. Thus, P-Ser-HPr is a corepressor in carbo
COG id: COG1925
COG function: function code G; Phosphotransferase system, HPr-related proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPr domain [H]
Homologues:
Organism=Escherichia coli, GI1788755, Length=85, Percent_Identity=41.1764705882353, Blast_Score=75, Evalue=7e-16, Organism=Escherichia coli, GI1788494, Length=84, Percent_Identity=38.0952380952381, Blast_Score=60, Evalue=2e-11,
Paralogues:
None
Copy number: 4180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 2100 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 3235 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001020 - InterPro: IPR005698 - InterPro: IPR000032 - InterPro: IPR002114 [H]
Pfam domain/function: PF00381 PTS-HPr [H]
EC number: NA
Molecular weight: Translated: 9027; Mature: 9027
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS00369 PTS_HPR_HIS ; PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLERELTVNSSTGLHARPATLLVKKASSFKSDLSIEFNGKKANIKSLIGVLSLGVTSGAK CCCCCEEECCCCCCCCCCHHHEEECCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCE IKLIASGDDETLAIEEISKLINTLE EEEEECCCCCEEEHHHHHHHHHHCC >Mature Secondary Structure MLERELTVNSSTGLHARPATLLVKKASSFKSDLSIEFNGKKANIKSLIGVLSLGVTSGAK CCCCCEEECCCCCCCCCCHHHEEECCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCE IKLIASGDDETLAIEEISKLINTLE EEEEECCCCCEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: sorbitol [Periplasm]; phosphoenolpyruvate; trehalose [Periplasm]; mannitol [Periplasm]; glucosamine [Periplasm]; N-acetyl-D-glucosamine [Periplasm]; mannose [Periplasm]; galactitol [Periplasm]; fructose [Periplasm]; beta-D-glucose [Periplasm]; diacetylchitobiose [Periplasm]; cellobiose [Periplasm]; salicin [Periplasm]; arbutin [Periplasm] [C]
Specific reaction: phosphoenolpyruvate + sorbitol [Periplasm] = D-sorbitol 6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + trehalose [Periplasm] = alpha,alpha-trehalose 6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + mannitol [Periplasm] = mannitol-1-phosp
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA