Click here to switch to the map view.

The map label for this gene is 153935786

Identifier: 153935786

GI number: 153935786

Start: 2319177

End: 2319773

Strand: Reverse

Name: 153935786

Synonym: CLC_2187

Alternate gene names: NA

Gene position: 2319773-2319177 (Counterclockwise)

Preceding gene: 153935007

Following gene: 153936662

Centisome position: 61.69

GC content: 26.8

Gene sequence:

>597_bases
ATGTTAGAAAAAAAAGAGGAACCATTTTATAAAAAAATTTGGTTTTGGATTATTGCTATAGTGATTGTATGTGGAGTAGC
TAGCTATGGTGATAGTAAAAAAATAAATATTACAGATACTAAAAATTCTGCTAAAACAGATACTAAAAAGGATGACACTA
GAAAAGTGACCTATGAAAAGTTTTGTAAAATAAAGATAGGTTCAACCTATGAAGAAGTAAAGAGTATTTTAGGAGAATAT
AAAGAATCAAAAGAATCTGAAATAAATGATATGAAAGTAGTTATATACAGTTGGTACAATGATGATAATAGTAACATGGA
GGTTATTGTTAAAAATAATAAAGTTATAGGAAAAGCTCAAGCTGGTCTTTCAATGGGAAAGGCAGATGTAAATTTAATAA
AATATGCAAAAATTACAACAGGAATGGATTATAGTAAAGTTGAAGAAATATTAGGTGATGGCAAATTGATGTCTATATCT
AAAACTAATGGAAGTACTAAATCAATATATTTATGGGCTAATCCTAATGGAACTAATATGAATGTAACATTTCAAAATGG
AAAAGTTACTGCAAAAAATCGACTTGGATTGAATTAA

Upstream 100 bases:

>100_bases
AGTGGAATGTGCATGAAAGAATTCCTAATAAATAGTGTCATATAAAAGATAAGTTTCATATAATAATATCTGAACAATTT
ACAGGAAAGAGGTCGATTAA

Downstream 100 bases:

>100_bases
ATAAGGTTAAAGAGATGCTTAAGAGTTTGAGTATCTCTTTTTTATTTTAGTTGGTAAGTTGAGGATAAGATATTCTTTTA
ATATTAAATTACATCTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MLEKKEEPFYKKIWFWIIAIVIVCGVASYGDSKKINITDTKNSAKTDTKKDDTRKVTYEKFCKIKIGSTYEEVKSILGEY
KESKESEINDMKVVIYSWYNDDNSNMEVIVKNNKVIGKAQAGLSMGKADVNLIKYAKITTGMDYSKVEEILGDGKLMSIS
KTNGSTKSIYLWANPNGTNMNVTFQNGKVTAKNRLGLN

Sequences:

>Translated_198_residues
MLEKKEEPFYKKIWFWIIAIVIVCGVASYGDSKKINITDTKNSAKTDTKKDDTRKVTYEKFCKIKIGSTYEEVKSILGEY
KESKESEINDMKVVIYSWYNDDNSNMEVIVKNNKVIGKAQAGLSMGKADVNLIKYAKITTGMDYSKVEEILGDGKLMSIS
KTNGSTKSIYLWANPNGTNMNVTFQNGKVTAKNRLGLN
>Mature_198_residues
MLEKKEEPFYKKIWFWIIAIVIVCGVASYGDSKKINITDTKNSAKTDTKKDDTRKVTYEKFCKIKIGSTYEEVKSILGEY
KESKESEINDMKVVIYSWYNDDNSNMEVIVKNNKVIGKAQAGLSMGKADVNLIKYAKITTGMDYSKVEEILGDGKLMSIS
KTNGSTKSIYLWANPNGTNMNVTFQNGKVTAKNRLGLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22317; Mature: 22317

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKKEEPFYKKIWFWIIAIVIVCGVASYGDSKKINITDTKNSAKTDTKKDDTRKVTYEK
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECHHH
FCKIKIGSTYEEVKSILGEYKESKESEINDMKVVIYSWYNDDNSNMEVIVKNNKVIGKAQ
EEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEECCEEEEEHH
AGLSMGKADVNLIKYAKITTGMDYSKVEEILGDGKLMSISKTNGSTKSIYLWANPNGTNM
CCCCCCCCCEEEEEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCEE
NVTFQNGKVTAKNRLGLN
EEEEECCEEEECCCCCCC
>Mature Secondary Structure
MLEKKEEPFYKKIWFWIIAIVIVCGVASYGDSKKINITDTKNSAKTDTKKDDTRKVTYEK
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECHHH
FCKIKIGSTYEEVKSILGEYKESKESEINDMKVVIYSWYNDDNSNMEVIVKNNKVIGKAQ
EEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEECCEEEEEHH
AGLSMGKADVNLIKYAKITTGMDYSKVEEILGDGKLMSISKTNGSTKSIYLWANPNGTNM
CCCCCCCCCEEEEEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCEE
NVTFQNGKVTAKNRLGLN
EEEEECCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA