| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is lctP [H]
Identifier: 153935567
GI number: 153935567
Start: 1079316
End: 1080839
Strand: Direct
Name: lctP [H]
Synonym: CLC_1058
Alternate gene names: 153935567
Gene position: 1079316-1080839 (Clockwise)
Preceding gene: 153935266
Following gene: 153936364
Centisome position: 28.7
GC content: 34.06
Gene sequence:
>1524_bases ATGAATATGTATCTAACGTGTTTCATTGCTTTGGTGCCTATAGCTTGGTTAATGGTTTCATTAGGAATTTTAAAAATGCC AGGTTATAAAACTTGTCCTGCAACATTGGTATTAACTGTAATTTTAGCAGTTATAGTATGGAAAATGCCAATTTTAGATG CAGCTTCTGCTGCTTTAGAAGGAATGGCATTGGCTTTATGGCCTATAATACTTGTAATCGTTGCTGCAGTATTTACCTAT AATTTATCAATTCATACTAAAAGTATGGATACTATAAAAAAGATGATGACTTCAATAACTACAGATAAGAGAATTTTGGT TTTAATACTTGCTTGGGGATTTGGCGGATTTTTGGAGGCCATAGCAGGGTTTGGTACCGCAGTTGCTATTCCTGCAAGTA TAATGGCAGCACTTGGATTTGACCCTATTTTTGCGGCTATAATATGTCTTATAGCAAACACTACACCTACAGCTTTTGGA GGTATAGGAATTCCAGTAACAACTCTTGCTAAGGTAACTAACATAGATGTAATTCAACTTAGTTATGCAGTAGGATTACA GTTATCAGTTCTAATAGTCATAATTCCAATAGTTTTAGTAATGTTAACAGGAAAAAGTGTGAAATCTATTAAGGGTGTCT TTGGAATAGCCCTAGCTTCAGGTCTTTCATTTGCAATACCAGAATTATTAATGGCTAAGTATATGGGGGCAGAATTACCT GCTATATTAGGGTCAATAACATGTATGGTAGTAACTATAGCTATGGCAAAGATATTTTATAAAGATACTGCTTCTAAAAA TGTAGAAAAAATACCTTTTAAAAAGGCAGTTATAGCATGGTTACCCTTTATATTAGTTTTTGTTTTCATAATTTTAACTA GTCCATTGTTCCCAGCAATAAATAAAGGACTATCTCAAATACAAACAACTCTTTACATTTATACAGGTGCCCATGCTAAG CCATTTACATTCTTGTGGCTTGCTACACCAGGAACATTAATTATAATAGCTACTTTTATAGGGGGATTAATACAAGGGGC TAAGTTTTCTGAAATAGTTTCAGTATTAGTAAAAACTATAAAGCAAATGAGTAAATCTGCAATAACAATAATAGCCATAG TAGCTATGGCAAAGATTATGGGATATAGCGGAATGATAAAATCAATAGCAGTTGTATTAGTAGCGGTTACAGGTAGTTAC TATCCTTTAATATCACCTATAATCGGAGCTTTAGGAACTTTTGTAACAGGCAGTGATACTTCATCTAATGTATTATTTGG AGGACTTCAAGTTGAAGTAGCTAAAACTTTAGGATTAAATCCGTACTGGCTTGCAGCAGCTAATACTGGTGGTGCTACTG CGGGTAAGATGATATCACCACAAAGTATAGCAGTGGCTACAGCAGCTACTGGACTTGTTGGAGCAGAAGGTAAAATATTA AATGCGACTATAAAATTTTGTATAGTTTACGTAATTGTTTTAGGAATCATGGCTTATTTTATGGCACCTGTGTTTGGATT CTAA
Upstream 100 bases:
>100_bases CTAAAGTTAAGAAAATAACTATTATAGAAATCTTATGAAAAGTGGAGTAAAATGAAAACAATAAGAGGTCGTACCATATT ACCGTAAGGGGGAAACCTAT
Downstream 100 bases:
>100_bases TTGCTTAAACTAATGAGGAGGATGAAATATGGCAAAGATAAAAATACCATATCACAAGAAAATGATTGAAATAGGGATAG AAGATAAAAATTTAGTAGGA
Product: L-lactate permease
Products: lactate [Cytoplasm]; Proton [Cytoplasm]; glycolate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MNMYLTCFIALVPIAWLMVSLGILKMPGYKTCPATLVLTVILAVIVWKMPILDAASAALEGMALALWPIILVIVAAVFTY NLSIHTKSMDTIKKMMTSITTDKRILVLILAWGFGGFLEAIAGFGTAVAIPASIMAALGFDPIFAAIICLIANTTPTAFG GIGIPVTTLAKVTNIDVIQLSYAVGLQLSVLIVIIPIVLVMLTGKSVKSIKGVFGIALASGLSFAIPELLMAKYMGAELP AILGSITCMVVTIAMAKIFYKDTASKNVEKIPFKKAVIAWLPFILVFVFIILTSPLFPAINKGLSQIQTTLYIYTGAHAK PFTFLWLATPGTLIIIATFIGGLIQGAKFSEIVSVLVKTIKQMSKSAITIIAIVAMAKIMGYSGMIKSIAVVLVAVTGSY YPLISPIIGALGTFVTGSDTSSNVLFGGLQVEVAKTLGLNPYWLAAANTGGATAGKMISPQSIAVATAATGLVGAEGKIL NATIKFCIVYVIVLGIMAYFMAPVFGF
Sequences:
>Translated_507_residues MNMYLTCFIALVPIAWLMVSLGILKMPGYKTCPATLVLTVILAVIVWKMPILDAASAALEGMALALWPIILVIVAAVFTY NLSIHTKSMDTIKKMMTSITTDKRILVLILAWGFGGFLEAIAGFGTAVAIPASIMAALGFDPIFAAIICLIANTTPTAFG GIGIPVTTLAKVTNIDVIQLSYAVGLQLSVLIVIIPIVLVMLTGKSVKSIKGVFGIALASGLSFAIPELLMAKYMGAELP AILGSITCMVVTIAMAKIFYKDTASKNVEKIPFKKAVIAWLPFILVFVFIILTSPLFPAINKGLSQIQTTLYIYTGAHAK PFTFLWLATPGTLIIIATFIGGLIQGAKFSEIVSVLVKTIKQMSKSAITIIAIVAMAKIMGYSGMIKSIAVVLVAVTGSY YPLISPIIGALGTFVTGSDTSSNVLFGGLQVEVAKTLGLNPYWLAAANTGGATAGKMISPQSIAVATAATGLVGAEGKIL NATIKFCIVYVIVLGIMAYFMAPVFGF >Mature_507_residues MNMYLTCFIALVPIAWLMVSLGILKMPGYKTCPATLVLTVILAVIVWKMPILDAASAALEGMALALWPIILVIVAAVFTY NLSIHTKSMDTIKKMMTSITTDKRILVLILAWGFGGFLEAIAGFGTAVAIPASIMAALGFDPIFAAIICLIANTTPTAFG GIGIPVTTLAKVTNIDVIQLSYAVGLQLSVLIVIIPIVLVMLTGKSVKSIKGVFGIALASGLSFAIPELLMAKYMGAELP AILGSITCMVVTIAMAKIFYKDTASKNVEKIPFKKAVIAWLPFILVFVFIILTSPLFPAINKGLSQIQTTLYIYTGAHAK PFTFLWLATPGTLIIIATFIGGLIQGAKFSEIVSVLVKTIKQMSKSAITIIAIVAMAKIMGYSGMIKSIAVVLVAVTGSY YPLISPIIGALGTFVTGSDTSSNVLFGGLQVEVAKTLGLNPYWLAAANTGGATAGKMISPQSIAVATAATGLVGAEGKIL NATIKFCIVYVIVLGIMAYFMAPVFGF
Specific function: Plays a role in L-lactate utilization [H]
COG id: COG1620
COG function: function code C; L-lactate permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lactate permease family [H]
Homologues:
Organism=Escherichia coli, GI1789347, Length=546, Percent_Identity=36.6300366300366, Blast_Score=287, Evalue=1e-78, Organism=Escherichia coli, GI1790031, Length=536, Percent_Identity=34.3283582089552, Blast_Score=268, Evalue=8e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003804 [H]
Pfam domain/function: PF02652 Lactate_perm [H]
EC number: NA
Molecular weight: Translated: 53345; Mature: 53345
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMYLTCFIALVPIAWLMVSLGILKMPGYKTCPATLVLTVILAVIVWKMPILDAASAALE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMALALWPIILVIVAAVFTYNLSIHTKSMDTIKKMMTSITTDKRILVLILAWGFGGFLEA HHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCHHEEEEEHHCHHHHHHH IAGFGTAVAIPASIMAALGFDPIFAAIICLIANTTPTAFGGIGIPVTTLAKVTNIDVIQL HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEEEE SYAVGLQLSVLIVIIPIVLVMLTGKSVKSIKGVFGIALASGLSFAIPELLMAKYMGAELP HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHH AILGSITCMVVTIAMAKIFYKDTASKNVEKIPFKKAVIAWLPFILVFVFIILTSPLFPAI HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH NKGLSQIQTTLYIYTGAHAKPFTFLWLATPGTLIIIATFIGGLIQGAKFSEIVSVLVKTI HHHHHHHHHEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KQMSKSAITIIAIVAMAKIMGYSGMIKSIAVVLVAVTGSYYPLISPIIGALGTFVTGSDT HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC SSNVLFGGLQVEVAKTLGLNPYWLAAANTGGATAGKMISPQSIAVATAATGLVGAEGKIL CCCEEEECEEEEEHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHH NATIKFCIVYVIVLGIMAYFMAPVFGF HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNMYLTCFIALVPIAWLMVSLGILKMPGYKTCPATLVLTVILAVIVWKMPILDAASAALE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMALALWPIILVIVAAVFTYNLSIHTKSMDTIKKMMTSITTDKRILVLILAWGFGGFLEA HHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCHHEEEEEHHCHHHHHHH IAGFGTAVAIPASIMAALGFDPIFAAIICLIANTTPTAFGGIGIPVTTLAKVTNIDVIQL HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEEEE SYAVGLQLSVLIVIIPIVLVMLTGKSVKSIKGVFGIALASGLSFAIPELLMAKYMGAELP HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHH AILGSITCMVVTIAMAKIFYKDTASKNVEKIPFKKAVIAWLPFILVFVFIILTSPLFPAI HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH NKGLSQIQTTLYIYTGAHAKPFTFLWLATPGTLIIIATFIGGLIQGAKFSEIVSVLVKTI HHHHHHHHHEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KQMSKSAITIIAIVAMAKIMGYSGMIKSIAVVLVAVTGSYYPLISPIIGALGTFVTGSDT HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC SSNVLFGGLQVEVAKTLGLNPYWLAAANTGGATAGKMISPQSIAVATAATGLVGAEGKIL CCCEEEECEEEEEHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHH NATIKFCIVYVIVLGIMAYFMAPVFGF HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: lactate [Periplasm]; Proton [Periplasm]; glycolate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + lactate [Periplasm] = Proton [Cytoplasm] + lactate [Cytoplasm] Proton [Periplasm] + glycolate [Periplasm] = Proton [Cytoplasm] + glycolate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10508058 [H]