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The map label for this gene is natB [H]

Identifier: 153935176

GI number: 153935176

Start: 2298388

End: 2299566

Strand: Reverse

Name: natB [H]

Synonym: CLC_2160

Alternate gene names: 153935176

Gene position: 2299566-2298388 (Counterclockwise)

Preceding gene: 153937266

Following gene: 153936126

Centisome position: 61.15

GC content: 29.01

Gene sequence:

>1179_bases
ATGAAAAATATAGTAGCAGTAGTGTTAAAAAAAGAACTTTTAGATTTATTTAGAGACAAAAAAACACTAATATTAAGTAT
ATTAATTCCAATAATTCTTTTACCTATAATGTCTTTTGCTATTGGTAAAATGGCAAAATCAGATAGTGATAAGGTTCAAA
ATAACCTTAAAATAGCGATAGTAGATCAAGGAAATAGTAGTTTTTCTAAATTTATAAAATCTCATAAAAATGTTAAAGTA
ATGGACGCTAAAAATATTGATAAAGACATAAAAGATGGAGATGTATATCTACAGATTAAAATCCCAAAGGGATTTGATGA
AAACATATCAAAGGATTCTAATGAAAAAATAGAATTAAAATATGATAACTCAAGTAATGATGCAATGACAGCTGTATCAA
TGATTAAAAATTACATAGATGAATATTCAAAACAAATAGTTGCAGAGCGACTTGAAAGGAAGGATATAGATCAATCCATA
TTAACCCCAATTAATATTGTAGATAATGTGGTTGGAGATAAAGATGATGGTTTTGGGAAAATAATGGCTTCAATGATGAT
TCCTTTACTTTTAATGCTTTACAGTGCAACAAGTACAATTGGAGCAGCAGTAGATCTAGGGGCAGGAGAGAAAGAAAGAG
GAACACTTGAACCACTTCTTACAACAAAAGCAGGAAGAACATCTTTACTTGTAGGAAAATTTCTTGCAATAACAGTAATG
GGAATATTAATGTCCTGTGCTTATTTGATTGGAATATTAATAACAATGAATCAACCAAATGGAATGTTTGGTGATGCAGG
ACTAAACTTAGGACCAGCTACTTTAGTTCTTATTATGATTTTACCTATTTTATATACAATGGTATTTGGAGCACTTCAAC
TGGCCATTAGTATCTATGCAAAATCATTTAAAGAAGCTCAAACGTACCTAAGTCCTATAACTATTATAGCCATGGTATTA
ATTTATATGGTTATGATGAAAGACCCTAAAAATATAGGAATGCTTTATTTTAATATACCACTTACAAATGGAGTGTGCCT
TATGAAAGAGTTTTTAGCTGGAATTTATAACCATACTCATATAGCAATAACCTTTGGCTGGATAATTGTATATATAGTTG
CATCTATTTCATTTGCAAGATATATGTTCTCAAAAGAAGAAGTTATATTTAGAACATAA

Upstream 100 bases:

>100_bases
ATAGTAGAAGAAGGAAAGCTCAAAGAACTTGAAGAAAAATATAATAACAGCATAGAAGAAATATTTATAAATTTAATAGC
AAAGTAAAGAGGGTGATTAT

Downstream 100 bases:

>100_bases
TATAAGTTGCATAAATAAAACTAATTAAAAAAAGTATTTATTTATATAAATTTTGATTTTAAAGAGAATGTCTCAAAATA
AAAATAGCCTTAATTTTAAT

Product: putative sodium extrusion protein NatB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKNIVAVVLKKELLDLFRDKKTLILSILIPIILLPIMSFAIGKMAKSDSDKVQNNLKIAIVDQGNSSFSKFIKSHKNVKV
MDAKNIDKDIKDGDVYLQIKIPKGFDENISKDSNEKIELKYDNSSNDAMTAVSMIKNYIDEYSKQIVAERLERKDIDQSI
LTPINIVDNVVGDKDDGFGKIMASMMIPLLLMLYSATSTIGAAVDLGAGEKERGTLEPLLTTKAGRTSLLVGKFLAITVM
GILMSCAYLIGILITMNQPNGMFGDAGLNLGPATLVLIMILPILYTMVFGALQLAISIYAKSFKEAQTYLSPITIIAMVL
IYMVMMKDPKNIGMLYFNIPLTNGVCLMKEFLAGIYNHTHIAITFGWIIVYIVASISFARYMFSKEEVIFRT

Sequences:

>Translated_392_residues
MKNIVAVVLKKELLDLFRDKKTLILSILIPIILLPIMSFAIGKMAKSDSDKVQNNLKIAIVDQGNSSFSKFIKSHKNVKV
MDAKNIDKDIKDGDVYLQIKIPKGFDENISKDSNEKIELKYDNSSNDAMTAVSMIKNYIDEYSKQIVAERLERKDIDQSI
LTPINIVDNVVGDKDDGFGKIMASMMIPLLLMLYSATSTIGAAVDLGAGEKERGTLEPLLTTKAGRTSLLVGKFLAITVM
GILMSCAYLIGILITMNQPNGMFGDAGLNLGPATLVLIMILPILYTMVFGALQLAISIYAKSFKEAQTYLSPITIIAMVL
IYMVMMKDPKNIGMLYFNIPLTNGVCLMKEFLAGIYNHTHIAITFGWIIVYIVASISFARYMFSKEEVIFRT
>Mature_392_residues
MKNIVAVVLKKELLDLFRDKKTLILSILIPIILLPIMSFAIGKMAKSDSDKVQNNLKIAIVDQGNSSFSKFIKSHKNVKV
MDAKNIDKDIKDGDVYLQIKIPKGFDENISKDSNEKIELKYDNSSNDAMTAVSMIKNYIDEYSKQIVAERLERKDIDQSI
LTPINIVDNVVGDKDDGFGKIMASMMIPLLLMLYSATSTIGAAVDLGAGEKERGTLEPLLTTKAGRTSLLVGKFLAITVM
GILMSCAYLIGILITMNQPNGMFGDAGLNLGPATLVLIMILPILYTMVFGALQLAISIYAKSFKEAQTYLSPITIIAMVL
IYMVMMKDPKNIGMLYFNIPLTNGVCLMKEFLAGIYNHTHIAITFGWIIVYIVASISFARYMFSKEEVIFRT

Specific function: Involved in ATP-dependent electrogenic sodium extrusion [H]

COG id: COG1668

COG function: function code CP; ABC-type Na+ efflux pump, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43477; Mature: 43477

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIVAVVLKKELLDLFRDKKTLILSILIPIILLPIMSFAIGKMAKSDSDKVQNNLKIAI
CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEE
VDQGNSSFSKFIKSHKNVKVMDAKNIDKDIKDGDVYLQIKIPKGFDENISKDSNEKIELK
EECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEE
YDNSSNDAMTAVSMIKNYIDEYSKQIVAERLERKDIDQSILTPINIVDNVVGDKDDGFGK
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHH
IMASMMIPLLLMLYSATSTIGAAVDLGAGEKERGTLEPLLTTKAGRTSLLVGKFLAITVM
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH
GILMSCAYLIGILITMNQPNGMFGDAGLNLGPATLVLIMILPILYTMVFGALQLAISIYA
HHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSFKEAQTYLSPITIIAMVLIYMVMMKDPKNIGMLYFNIPLTNGVCLMKEFLAGIYNHTH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCE
IAITFGWIIVYIVASISFARYMFSKEEVIFRT
EEHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
>Mature Secondary Structure
MKNIVAVVLKKELLDLFRDKKTLILSILIPIILLPIMSFAIGKMAKSDSDKVQNNLKIAI
CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEE
VDQGNSSFSKFIKSHKNVKVMDAKNIDKDIKDGDVYLQIKIPKGFDENISKDSNEKIELK
EECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEE
YDNSSNDAMTAVSMIKNYIDEYSKQIVAERLERKDIDQSILTPINIVDNVVGDKDDGFGK
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHH
IMASMMIPLLLMLYSATSTIGAAVDLGAGEKERGTLEPLLTTKAGRTSLLVGKFLAITVM
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH
GILMSCAYLIGILITMNQPNGMFGDAGLNLGPATLVLIMILPILYTMVFGALQLAISIYA
HHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSFKEAQTYLSPITIIAMVLIYMVMMKDPKNIGMLYFNIPLTNGVCLMKEFLAGIYNHTH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCE
IAITFGWIIVYIVASISFARYMFSKEEVIFRT
EEHHHHHHHHHHHHHHHHHHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9106203; 9384377 [H]