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The map label for this gene is cmr4

Identifier: 153935145

GI number: 153935145

Start: 2244810

End: 2245649

Strand: Reverse

Name: cmr4

Synonym: CLC_2115

Alternate gene names: NA

Gene position: 2245649-2244810 (Counterclockwise)

Preceding gene: 153937358

Following gene: 153935378

Centisome position: 59.72

GC content: 26.31

Gene sequence:

>840_bases
ATGGATAATTTTAAAATATATACAATAAGATGTTTAACTAATATGCATGTTGGTAGTGGAGATGCAAGTTATACACTTAT
AGATAATCAAGTTCAAAGAGACGTAATAACAGGATTCCCAACTATTAATTCTTCTAGCTTGAAAGGAAGTTTAAGAAGTT
TCTTAGATCCTAAAAAGGAAAAAAGCAAGGCAATTAAATATATTTTTGGGGATAAAGAAGATGGAATGGGAAATTATAAG
ATTTTCCCAGGAATGCTTTTGTCAATGCCAGTAAGAAGTAATGTTAAACCATTTTTTAGAGCTACTTGCCCAAGAATAAT
AAAGGATTTCTTAGGATTTATAGAAAATTTTCAGCCTCAAACAAGTGATATAAAAAATATTAAAACATTGGAAGAAGATT
TAAAAAATATTGAAAAAGTAGCAGATAAAAATAAAAATACTATATTTATTTTGAAAAATTTCAATAGAGATATTGATGTA
AAGTTTGACAATAACCAAAGAATAGAAGGAATTAAGATTACTTCAGAACAAGAAATATCATTAAAAGGAGAAGAAAGAAT
AAAAGAAATATTTGGAGAAAGTTTGATTTTAATAGATGATAATAGTTTTAATGATATAGTAGATAGATTACCTGTTATAG
CAAGAAATAAACTTGATAATGGAGAAAGTGAAAATCTATGGTATGAAGAAGTTGTACCAAGAGAAACTAGATTTTATTTT
GGGACAATTTTAGGAAAAGAACACCAAAGTGAATTTGGAAAAATAGAAGGAAAACAACCAGTTCAAATAGGTAGTAATGC
AACTATTGGATATGGATATTGTGATATAAAATCTATTTAA

Upstream 100 bases:

>100_bases
TGTTTGCTAGTAAGGAAAATTATGATAGATTAATAAAAAATATAAATAATAGTAAATTTCAAAAAATAGGATATAACATA
TTTATTTAGGGGGATTTAGA

Downstream 100 bases:

>100_bases
TAAATTAGTTAGAAAGCAGGTGATTAAATGAATAAGAGAGAAATAGAAAAACAAATACCAATTGCTATAGATTTAATAGA
TGAATTTATGAAGAAAAAGA

Product: CRISPR-associated RAMP Cmr4 family protein family protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Cmr4 Family Protein Family Protein; CRISPR-Associated Ramp Protein; CRISPR-Associated Ramp Protein Cmr4 Family; CRISPR-Associated Cmr4 Family Protein

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MDNFKIYTIRCLTNMHVGSGDASYTLIDNQVQRDVITGFPTINSSSLKGSLRSFLDPKKEKSKAIKYIFGDKEDGMGNYK
IFPGMLLSMPVRSNVKPFFRATCPRIIKDFLGFIENFQPQTSDIKNIKTLEEDLKNIEKVADKNKNTIFILKNFNRDIDV
KFDNNQRIEGIKITSEQEISLKGEERIKEIFGESLILIDDNSFNDIVDRLPVIARNKLDNGESENLWYEEVVPRETRFYF
GTILGKEHQSEFGKIEGKQPVQIGSNATIGYGYCDIKSI

Sequences:

>Translated_279_residues
MDNFKIYTIRCLTNMHVGSGDASYTLIDNQVQRDVITGFPTINSSSLKGSLRSFLDPKKEKSKAIKYIFGDKEDGMGNYK
IFPGMLLSMPVRSNVKPFFRATCPRIIKDFLGFIENFQPQTSDIKNIKTLEEDLKNIEKVADKNKNTIFILKNFNRDIDV
KFDNNQRIEGIKITSEQEISLKGEERIKEIFGESLILIDDNSFNDIVDRLPVIARNKLDNGESENLWYEEVVPRETRFYF
GTILGKEHQSEFGKIEGKQPVQIGSNATIGYGYCDIKSI
>Mature_279_residues
MDNFKIYTIRCLTNMHVGSGDASYTLIDNQVQRDVITGFPTINSSSLKGSLRSFLDPKKEKSKAIKYIFGDKEDGMGNYK
IFPGMLLSMPVRSNVKPFFRATCPRIIKDFLGFIENFQPQTSDIKNIKTLEEDLKNIEKVADKNKNTIFILKNFNRDIDV
KFDNNQRIEGIKITSEQEISLKGEERIKEIFGESLILIDDNSFNDIVDRLPVIARNKLDNGESENLWYEEVVPRETRFYF
GTILGKEHQSEFGKIEGKQPVQIGSNATIGYGYCDIKSI

Specific function: Unknown

COG id: COG1336

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31921; Mature: 31921

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNFKIYTIRCLTNMHVGSGDASYTLIDNQVQRDVITGFPTINSSSLKGSLRSFLDPKKE
CCCEEEEEEEEEEEEECCCCCCEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHH
KSKAIKYIFGDKEDGMGNYKIFPGMLLSMPVRSNVKPFFRATCPRIIKDFLGFIENFQPQ
HHHHEEEEECCCCCCCCCEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
TSDIKNIKTLEEDLKNIEKVADKNKNTIFILKNFNRDIDVKFDNNQRIEGIKITSEQEIS
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCC
LKGEERIKEIFGESLILIDDNSFNDIVDRLPVIARNKLDNGESENLWYEEVVPRETRFYF
CCHHHHHHHHHCCEEEEEECCCHHHHHHHCCHHHHCCCCCCCCCCCCHHHHCCCCHHEEE
GTILGKEHQSEFGKIEGKQPVQIGSNATIGYGYCDIKSI
HHHHCCHHHHHHCCCCCCCCEEECCCCEEEEEEEEECCC
>Mature Secondary Structure
MDNFKIYTIRCLTNMHVGSGDASYTLIDNQVQRDVITGFPTINSSSLKGSLRSFLDPKKE
CCCEEEEEEEEEEEEECCCCCCEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHH
KSKAIKYIFGDKEDGMGNYKIFPGMLLSMPVRSNVKPFFRATCPRIIKDFLGFIENFQPQ
HHHHEEEEECCCCCCCCCEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
TSDIKNIKTLEEDLKNIEKVADKNKNTIFILKNFNRDIDVKFDNNQRIEGIKITSEQEIS
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCC
LKGEERIKEIFGESLILIDDNSFNDIVDRLPVIARNKLDNGESENLWYEEVVPRETRFYF
CCHHHHHHHHHCCEEEEEECCCHHHHHHHCCHHHHCCCCCCCCCCCCHHHHCCCCHHEEE
GTILGKEHQSEFGKIEGKQPVQIGSNATIGYGYCDIKSI
HHHHCCHHHHHHCCCCCCCCEEECCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA