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The map label for this gene is yraN [C]

Identifier: 153934623

GI number: 153934623

Start: 2418924

End: 2419295

Strand: Direct

Name: yraN [C]

Synonym: CLC_2288

Alternate gene names: 153934623

Gene position: 2418924-2419295 (Clockwise)

Preceding gene: 153937157

Following gene: 153936839

Centisome position: 64.32

GC content: 23.39

Gene sequence:

>372_bases
ATGCACTACTGTAATAAGGATATTGGCTCTTTTGGTGAAACTATAGCTGTTGACTATATTAAAAATTGTGGATATATTAT
ATTAGAAAGAAATTTTAGATGTAAATTAGGTGAAATAGATATAATAGCTAAAGATAAAAATTTTATTGTCTTTATAGAAG
TTAAAACTAGATACAGTTATATTTATGGTAGTCCTAGTGAGGCCATAACTTTTAGAAAGCAGAATAAAATTTATAAAACA
GCTCAATTATACATAATAAAAAAAGCTATACATAATAAATTTTACTTTAGATTTGATGTAATAGAAGTAATCTTGAACAC
TCTCAATAGTAATTACTCTGTAAAACTTATAAAAAACGCTTTTCAAATATAA

Upstream 100 bases:

>100_bases
TTTAAACAATAATGAAAAAATTCAAAAGGAAGATATTATAGAAGCTTTGCAATATAGAAAATTTGTAAATAATGATATAC
TCTAATGAAAGGTGATATTT

Downstream 100 bases:

>100_bases
AAAATACACCTAATAAGTGTATTTTTATATTGGGGCTGTCAAAATCGAATCTATTTTGAGAAACCGTTTTTTATTTATTT
AATTACAATATATTTGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MHYCNKDIGSFGETIAVDYIKNCGYIILERNFRCKLGEIDIIAKDKNFIVFIEVKTRYSYIYGSPSEAITFRKQNKIYKT
AQLYIIKKAIHNKFYFRFDVIEVILNTLNSNYSVKLIKNAFQI

Sequences:

>Translated_123_residues
MHYCNKDIGSFGETIAVDYIKNCGYIILERNFRCKLGEIDIIAKDKNFIVFIEVKTRYSYIYGSPSEAITFRKQNKIYKT
AQLYIIKKAIHNKFYFRFDVIEVILNTLNSNYSVKLIKNAFQI
>Mature_123_residues
MHYCNKDIGSFGETIAVDYIKNCGYIILERNFRCKLGEIDIIAKDKNFIVFIEVKTRYSYIYGSPSEAITFRKQNKIYKT
AQLYIIKKAIHNKFYFRFDVIEVILNTLNSNYSVKLIKNAFQI

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 14514; Mature: 14514

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYCNKDIGSFGETIAVDYIKNCGYIILERNFRCKLGEIDIIAKDKNFIVFIEVKTRYSY
CCCCCCCCCCCCCEEEEEHHHCCCEEEEECCCEEEECCEEEEEECCCEEEEEEEEEEEEE
IYGSPSEAITFRKQNKIYKTAQLYIIKKAIHNKFYFRFDVIEVILNTLNSNYSVKLIKNA
EECCCCCEEEEECCCCEEEHHHHEEEHHHHCCCEEEEHHHHHHHHHHHCCCEEEEEECHH
FQI
HCC
>Mature Secondary Structure
MHYCNKDIGSFGETIAVDYIKNCGYIILERNFRCKLGEIDIIAKDKNFIVFIEVKTRYSY
CCCCCCCCCCCCCEEEEEHHHCCCEEEEECCCEEEECCEEEEEECCCEEEEEEEEEEEEE
IYGSPSEAITFRKQNKIYKTAQLYIIKKAIHNKFYFRFDVIEVILNTLNSNYSVKLIKNA
EECCCCCEEEEECCCCEEEHHHHEEEHHHHCCCEEEEHHHHHHHHHHHCCCEEEEEECHH
FQI
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA