| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is hemA [H]
Identifier: 89256991
GI number: 89256991
Start: 1652790
End: 1654034
Strand: Reverse
Name: hemA [H]
Synonym: FTL_1722
Alternate gene names: 89256991
Gene position: 1654034-1652790 (Counterclockwise)
Preceding gene: 89256996
Following gene: 89256990
Centisome position: 87.24
GC content: 32.69
Gene sequence:
>1245_bases ATGGCGTTAATATCTTTAGCAATTGATTATAAAAAGTCTCCGATAGAAGTTCGTAGTGAGTTTGCACTCTCTGGTTTAGA TGTATCTATGCTATATAGATCAATACTTGCTATAGATAATGTTGTACATGCTGTAATCTTATCAACTTGTAATCGTACAG AAGTATATCTTGAGATATCTGATCTAAGAGTAGTTGATGATATTTTAGTATGGTGGCAAGGCTATGTTAGAAACCCTAAT TATAAAATAAAAGATTATTTTAAGCTAAGACAAGGTACAGAAGTAATTATGCACCTTATGAAATTGGCTTGTGGTTTAGA ATCGATGGTTTTAGGTGAACCGCAAATATTAGGACAAGTAAAAGATTCTTATACTCTCAGTAAAAAAAATCATGCTATTG GTAAAGAACTAGATAGGGTTTTTCAGAAGGTTTTTGCAACTGCTAAAAGAGTACGTAGTGAAACTAGAATTGGTTATTGC CCAGTTTCAGTTGCATTCTCAGCAATTACTTTGGCTAAAAGGCAACTAGATAATATTTCTAGTAAGAATGTCCTTATTAT TGGTGCTGGTCAAACAGGAGAGCTTTTGTTTCGTCATGTTACAGCACTTGCTCCTAAGCAGATAATGCTAGCAAACCGAA CTATCGAGAAAGCACAGAAAATTACTTCTGTTTTTAGAAATGCTAGTGCTCATTACTTATCAGAGCTACCGCAATTGATC AAAAAAGCTGATATTATAATTGCTGCAGTCAATGTTTTAGAATACATTGTCACATGCAAATATGTTGGCGATAAACCTAG AGTTTTTATTGATATATCAATACCTCAAGCTTTAGACCCTAAATTAGGCGAGTTAGAGCAAAATGTTTATTATTGCGTTG ATGATATTAACGCTGTTATTGAAGATAACAAAGATAAAAGAAAGTATGAAAGCTCTAAAGCACAGAAAATTATTGTAAAA TCTCTTGAGGAATATCTTGAAAAAGAAAAGGCTATTATCTCAAATAGTGCGATTAAAGAGCTTTTCCAAAAAGCTGACGG TTTAGTTGATTTATCGCTAGAGAAAAGCTTAGCTAAGATAAGAAATGGTAAAGATGCCGAAGAGATAATTAAAAGATTTG CTTATGAAATTAAAAAGAAAGTTTTACACTATCCTGTTGTAGGAATGAAAGAGGCTTCCAAGCAGGGTAGAAGTGACTGT CTTGTATGTATGAAACGTATGTTTGGTTTAAATGTGGAAAAATAA
Upstream 100 bases:
>100_bases TATTAATCAGATTAGAATGTAATGTCTTAGTCTTTTGTGTTAAAATATGTTTTTGTTTTTCTAGGTTAATTTATTTTATT ACATTTAATAATATTTGAAT
Downstream 100 bases:
>100_bases ATGAAAGATTCTATTAAAGCAAAATTGCAAAGTTTAATAGAAAGGCATGAGGAAGTTAGTGCCTTATTAAGTGAGGCAGG AATTATCTCTGATCAAAATA
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR [H]
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MALISLAIDYKKSPIEVRSEFALSGLDVSMLYRSILAIDNVVHAVILSTCNRTEVYLEISDLRVVDDILVWWQGYVRNPN YKIKDYFKLRQGTEVIMHLMKLACGLESMVLGEPQILGQVKDSYTLSKKNHAIGKELDRVFQKVFATAKRVRSETRIGYC PVSVAFSAITLAKRQLDNISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSVFRNASAHYLSELPQLI KKADIIIAAVNVLEYIVTCKYVGDKPRVFIDISIPQALDPKLGELEQNVYYCVDDINAVIEDNKDKRKYESSKAQKIIVK SLEEYLEKEKAIISNSAIKELFQKADGLVDLSLEKSLAKIRNGKDAEEIIKRFAYEIKKKVLHYPVVGMKEASKQGRSDC LVCMKRMFGLNVEK
Sequences:
>Translated_414_residues MALISLAIDYKKSPIEVRSEFALSGLDVSMLYRSILAIDNVVHAVILSTCNRTEVYLEISDLRVVDDILVWWQGYVRNPN YKIKDYFKLRQGTEVIMHLMKLACGLESMVLGEPQILGQVKDSYTLSKKNHAIGKELDRVFQKVFATAKRVRSETRIGYC PVSVAFSAITLAKRQLDNISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSVFRNASAHYLSELPQLI KKADIIIAAVNVLEYIVTCKYVGDKPRVFIDISIPQALDPKLGELEQNVYYCVDDINAVIEDNKDKRKYESSKAQKIIVK SLEEYLEKEKAIISNSAIKELFQKADGLVDLSLEKSLAKIRNGKDAEEIIKRFAYEIKKKVLHYPVVGMKEASKQGRSDC LVCMKRMFGLNVEK >Mature_413_residues ALISLAIDYKKSPIEVRSEFALSGLDVSMLYRSILAIDNVVHAVILSTCNRTEVYLEISDLRVVDDILVWWQGYVRNPNY KIKDYFKLRQGTEVIMHLMKLACGLESMVLGEPQILGQVKDSYTLSKKNHAIGKELDRVFQKVFATAKRVRSETRIGYCP VSVAFSAITLAKRQLDNISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSVFRNASAHYLSELPQLIK KADIIIAAVNVLEYIVTCKYVGDKPRVFIDISIPQALDPKLGELEQNVYYCVDDINAVIEDNKDKRKYESSKAQKIIVKS LEEYLEKEKAIISNSAIKELFQKADGLVDLSLEKSLAKIRNGKDAEEIIKRFAYEIKKKVLHYPVVGMKEASKQGRSDCL VCMKRMFGLNVEK
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) [H]
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family [H]
Homologues:
Organism=Escherichia coli, GI1787461, Length=418, Percent_Identity=33.7320574162679, Blast_Score=244, Evalue=6e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 [H]
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH [H]
EC number: =1.2.1.70 [H]
Molecular weight: Translated: 46785; Mature: 46654
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS00747 GLUTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALISLAIDYKKSPIEVRSEFALSGLDVSMLYRSILAIDNVVHAVILSTCNRTEVYLEIS CCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEH DLRVVDDILVWWQGYVRNPNYKIKDYFKLRQGTEVIMHLMKLACGLESMVLGEPQILGQV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHCHHHHHCCCHHHHHHH KDSYTLSKKNHAIGKELDRVFQKVFATAKRVRSETRIGYCPVSVAFSAITLAKRQLDNIS HHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC SKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSVFRNASAHYLSELPQLI CCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH KKADIIIAAVNVLEYIVTCKYVGDKPRVFIDISIPQALDPKLGELEQNVYYCVDDINAVI HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHEEHHHHHHHHH EDNKDKRKYESSKAQKIIVKSLEEYLEKEKAIISNSAIKELFQKADGLVDLSLEKSLAKI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH RNGKDAEEIIKRFAYEIKKKVLHYPVVGMKEASKQGRSDCLVCMKRMFGLNVEK HCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ALISLAIDYKKSPIEVRSEFALSGLDVSMLYRSILAIDNVVHAVILSTCNRTEVYLEIS CEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEH DLRVVDDILVWWQGYVRNPNYKIKDYFKLRQGTEVIMHLMKLACGLESMVLGEPQILGQV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHCHHHHHCCCHHHHHHH KDSYTLSKKNHAIGKELDRVFQKVFATAKRVRSETRIGYCPVSVAFSAITLAKRQLDNIS HHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC SKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSVFRNASAHYLSELPQLI CCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH KKADIIIAAVNVLEYIVTCKYVGDKPRVFIDISIPQALDPKLGELEQNVYYCVDDINAVI HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHEEHHHHHHHHH EDNKDKRKYESSKAQKIIVKSLEEYLEKEKAIISNSAIKELFQKADGLVDLSLEKSLAKI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH RNGKDAEEIIKRFAYEIKKKVLHYPVVGMKEASKQGRSDCLVCMKRMFGLNVEK HCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA