Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89256985

Identifier: 89256985

GI number: 89256985

Start: 1647620

End: 1648039

Strand: Direct

Name: 89256985

Synonym: FTL_1716

Alternate gene names: NA

Gene position: 1647620-1648039 (Clockwise)

Preceding gene: 89256982

Following gene: 89256986

Centisome position: 86.9

GC content: 28.81

Gene sequence:

>420_bases
ATGAGCTTTTTAGCTCGACTAATCCATACAATAGGATTTGAGTTTTTTGGCATTATAATATTTACACCTTTTGCGATGTT
TATTTTACATCAAGATGTATTTCATATCGCTAGCTTAGCTATTATTATTTCATTGATAGCAATGTTATGGAATTTTATCT
ATAACTATATTTTTGATATCATCGAAATAAAATTTGGTATGCACCGTTCAAAGAGAGGAATTATTATTCGCGCTTTACAC
GCTTTGCTTTTTGAACTTGGACTACTTATAGCTACAATTCCTTTGGTGGCTTATATACTAAATATGAGCTTCTTATCAGC
TCTTTTAGTTGATATTGGCTTTGTTATTTTTTACCTTGTATATGCTTTTGTGTATAATTATATCTTCGATAGGATATACT
TTGAGTTTATCCATAAATAA

Upstream 100 bases:

>100_bases
TCGATTTTAACTTTAATTAAAAAAACTAGCTAAATAACATATATAATAATTAAGTTTATTTTTCAAAGCTTGAAGGGTAT
ATAGTTTGAATATAAAAAAT

Downstream 100 bases:

>100_bases
CTTGCTACAAGCACCCATAGCTTAACTGGATAGAGCGTCGCCCTCCGGAGGCGGATACGGGGGTTCGAGTCCCTCTGGGT
GTGCCAATTGTTCTAATATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSFLARLIHTIGFEFFGIIIFTPFAMFILHQDVFHIASLAIIISLIAMLWNFIYNYIFDIIEIKFGMHRSKRGIIIRALH
ALLFELGLLIATIPLVAYILNMSFLSALLVDIGFVIFYLVYAFVYNYIFDRIYFEFIHK

Sequences:

>Translated_139_residues
MSFLARLIHTIGFEFFGIIIFTPFAMFILHQDVFHIASLAIIISLIAMLWNFIYNYIFDIIEIKFGMHRSKRGIIIRALH
ALLFELGLLIATIPLVAYILNMSFLSALLVDIGFVIFYLVYAFVYNYIFDRIYFEFIHK
>Mature_138_residues
SFLARLIHTIGFEFFGIIIFTPFAMFILHQDVFHIASLAIIISLIAMLWNFIYNYIFDIIEIKFGMHRSKRGIIIRALHA
LLFELGLLIATIPLVAYILNMSFLSALLVDIGFVIFYLVYAFVYNYIFDRIYFEFIHK

Specific function: Unknown

COG id: COG4125

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16343; Mature: 16212

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLARLIHTIGFEFFGIIIFTPFAMFILHQDVFHIASLAIIISLIAMLWNFIYNYIFDI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEIKFGMHRSKRGIIIRALHALLFELGLLIATIPLVAYILNMSFLSALLVDIGFVIFYLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAFVYNYIFDRIYFEFIHK
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFLARLIHTIGFEFFGIIIFTPFAMFILHQDVFHIASLAIIISLIAMLWNFIYNYIFDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEIKFGMHRSKRGIIIRALHALLFELGLLIATIPLVAYILNMSFLSALLVDIGFVIFYLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAFVYNYIFDRIYFEFIHK
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA