Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89256978

Identifier: 89256978

GI number: 89256978

Start: 1641454

End: 1641942

Strand: Reverse

Name: 89256978

Synonym: FTL_1709

Alternate gene names: NA

Gene position: 1641942-1641454 (Counterclockwise)

Preceding gene: 89256979

Following gene: 89256976

Centisome position: 86.6

GC content: 31.7

Gene sequence:

>489_bases
ATGACTATGTATTCAAAAAAAGCAAAAGTATTTTTTTCTAGGAAAGTAATTATAGTTATGCTTATGACTTTGTTAGTGAC
TAGTTGCGCAACTGACAAATATCAAGCTCGAGAACTTCCTTTGCTGAAGCATGGCTACTCTAAAAAGAACCTAACAGCGT
ATAATATTTTTGGATTCTGCTATGATAATACGCCAAGTGGAATCTTTAATATTATTGATAAAAAGCCAACTGAGTTTCTA
GTGAATATATATGTTGGTGATAATCAAGGTTGTAAATTTATCTATACTGCGGATACAAAAGGTAAACAAGGTGAAATTAC
TCAAACTGGCTCATTCACAGCATATTTATCTGGTAGAAATGAGTTGTTAAAGTTAGAATGTAAAGGTAAAGATTCTAATA
TAGATTACAAAGTTATCGCATATGCAAATGCTATTGAGTATGATAGGGTTGGTAACTTATCTTATTTGGTTGAGTCTGGG
GGTCTTTAA

Upstream 100 bases:

>100_bases
AAAGTTGATACTGAGGAATAACTAATAAAATCACTATAAATTATTGTCTCTTAGTCTTTTTAGGTTTATTCTTTTATATA
CGGTCTTTAAATTTTTTGTT

Downstream 100 bases:

>100_bases
TATATTTAAAGTGTTTATTTTCTCCAAAAATCTGGCATAAATAATACTAGAATTGTAAATATCTCAAGACGTCCTGCAAT
CATCGCAAAGTTGCATATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTMYSKKAKVFFSRKVIIVMLMTLLVTSCATDKYQARELPLLKHGYSKKNLTAYNIFGFCYDNTPSGIFNIIDKKPTEFL
VNIYVGDNQGCKFIYTADTKGKQGEITQTGSFTAYLSGRNELLKLECKGKDSNIDYKVIAYANAIEYDRVGNLSYLVESG
GL

Sequences:

>Translated_162_residues
MTMYSKKAKVFFSRKVIIVMLMTLLVTSCATDKYQARELPLLKHGYSKKNLTAYNIFGFCYDNTPSGIFNIIDKKPTEFL
VNIYVGDNQGCKFIYTADTKGKQGEITQTGSFTAYLSGRNELLKLECKGKDSNIDYKVIAYANAIEYDRVGNLSYLVESG
GL
>Mature_161_residues
TMYSKKAKVFFSRKVIIVMLMTLLVTSCATDKYQARELPLLKHGYSKKNLTAYNIFGFCYDNTPSGIFNIIDKKPTEFLV
NIYVGDNQGCKFIYTADTKGKQGEITQTGSFTAYLSGRNELLKLECKGKDSNIDYKVIAYANAIEYDRVGNLSYLVESGG
L

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18214; Mature: 18083

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMYSKKAKVFFSRKVIIVMLMTLLVTSCATDKYQARELPLLKHGYSKKNLTAYNIFGFC
CCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEEEEEEEE
YDNTPSGIFNIIDKKPTEFLVNIYVGDNQGCKFIYTADTKGKQGEITQTGSFTAYLSGRN
ECCCCCCEEEECCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCEEECCCEEEEECCCC
ELLKLECKGKDSNIDYKVIAYANAIEYDRVGNLSYLVESGGL
EEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure 
TMYSKKAKVFFSRKVIIVMLMTLLVTSCATDKYQARELPLLKHGYSKKNLTAYNIFGFC
CCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEEEEEEEE
YDNTPSGIFNIIDKKPTEFLVNIYVGDNQGCKFIYTADTKGKQGEITQTGSFTAYLSGRN
ECCCCCCEEEECCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCEEECCCEEEEECCCC
ELLKLECKGKDSNIDYKVIAYANAIEYDRVGNLSYLVESGGL
EEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA