| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256978
Identifier: 89256978
GI number: 89256978
Start: 1641454
End: 1641942
Strand: Reverse
Name: 89256978
Synonym: FTL_1709
Alternate gene names: NA
Gene position: 1641942-1641454 (Counterclockwise)
Preceding gene: 89256979
Following gene: 89256976
Centisome position: 86.6
GC content: 31.7
Gene sequence:
>489_bases ATGACTATGTATTCAAAAAAAGCAAAAGTATTTTTTTCTAGGAAAGTAATTATAGTTATGCTTATGACTTTGTTAGTGAC TAGTTGCGCAACTGACAAATATCAAGCTCGAGAACTTCCTTTGCTGAAGCATGGCTACTCTAAAAAGAACCTAACAGCGT ATAATATTTTTGGATTCTGCTATGATAATACGCCAAGTGGAATCTTTAATATTATTGATAAAAAGCCAACTGAGTTTCTA GTGAATATATATGTTGGTGATAATCAAGGTTGTAAATTTATCTATACTGCGGATACAAAAGGTAAACAAGGTGAAATTAC TCAAACTGGCTCATTCACAGCATATTTATCTGGTAGAAATGAGTTGTTAAAGTTAGAATGTAAAGGTAAAGATTCTAATA TAGATTACAAAGTTATCGCATATGCAAATGCTATTGAGTATGATAGGGTTGGTAACTTATCTTATTTGGTTGAGTCTGGG GGTCTTTAA
Upstream 100 bases:
>100_bases AAAGTTGATACTGAGGAATAACTAATAAAATCACTATAAATTATTGTCTCTTAGTCTTTTTAGGTTTATTCTTTTATATA CGGTCTTTAAATTTTTTGTT
Downstream 100 bases:
>100_bases TATATTTAAAGTGTTTATTTTCTCCAAAAATCTGGCATAAATAATACTAGAATTGTAAATATCTCAAGACGTCCTGCAAT CATCGCAAAGTTGCATATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTMYSKKAKVFFSRKVIIVMLMTLLVTSCATDKYQARELPLLKHGYSKKNLTAYNIFGFCYDNTPSGIFNIIDKKPTEFL VNIYVGDNQGCKFIYTADTKGKQGEITQTGSFTAYLSGRNELLKLECKGKDSNIDYKVIAYANAIEYDRVGNLSYLVESG GL
Sequences:
>Translated_162_residues MTMYSKKAKVFFSRKVIIVMLMTLLVTSCATDKYQARELPLLKHGYSKKNLTAYNIFGFCYDNTPSGIFNIIDKKPTEFL VNIYVGDNQGCKFIYTADTKGKQGEITQTGSFTAYLSGRNELLKLECKGKDSNIDYKVIAYANAIEYDRVGNLSYLVESG GL >Mature_161_residues TMYSKKAKVFFSRKVIIVMLMTLLVTSCATDKYQARELPLLKHGYSKKNLTAYNIFGFCYDNTPSGIFNIIDKKPTEFLV NIYVGDNQGCKFIYTADTKGKQGEITQTGSFTAYLSGRNELLKLECKGKDSNIDYKVIAYANAIEYDRVGNLSYLVESGG L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18214; Mature: 18083
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMYSKKAKVFFSRKVIIVMLMTLLVTSCATDKYQARELPLLKHGYSKKNLTAYNIFGFC CCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEEEEEEEE YDNTPSGIFNIIDKKPTEFLVNIYVGDNQGCKFIYTADTKGKQGEITQTGSFTAYLSGRN ECCCCCCEEEECCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCEEECCCEEEEECCCC ELLKLECKGKDSNIDYKVIAYANAIEYDRVGNLSYLVESGGL EEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCC >Mature Secondary Structure TMYSKKAKVFFSRKVIIVMLMTLLVTSCATDKYQARELPLLKHGYSKKNLTAYNIFGFC CCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEEEEEEEE YDNTPSGIFNIIDKKPTEFLVNIYVGDNQGCKFIYTADTKGKQGEITQTGSFTAYLSGRN ECCCCCCEEEECCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCEEECCCEEEEECCCC ELLKLECKGKDSNIDYKVIAYANAIEYDRVGNLSYLVESGGL EEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA