Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

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The map label for this gene is trkH [H]

Identifier: 89256977

GI number: 89256977

Start: 1639985

End: 1641439

Strand: Direct

Name: trkH [H]

Synonym: FTL_1708

Alternate gene names: 89256977

Gene position: 1639985-1641439 (Clockwise)

Preceding gene: 89256975

Following gene: 89256982

Centisome position: 86.5

GC content: 33.81

Gene sequence:

>1455_bases
ATGATGTTAAGCCAGAAACCAAAAATAATTGGTATATTTTTAATGTTCCTTAGCCTTACCATGCTTAGTCCTTTATTGGT
TGACTATATATATGATGAAGATAATGCATATCCATTTGTGTTGAATTTTACAGTAACATTTTTATGTGGTTTTTTGCTTT
GGTTTATTTCACGTAAATCAAATAAGAAACTATCAAATAGAGATGGTTTTCTTATAGTTACACTCGTTTGGATATTTGTA
ACAGTCTTTGGTGCAATACCATATATGTCTTTTCCTGGACTAAATCTATCCTTTACTAATGCAGTATTTGAGTCTGTTTC
TGGATTTACTACAACTGGTGGTACTGTGATTGAAGGACTTGATAAGCTTCCTCATAGCATTTTATTTTATCGACAACAAA
CTGAATTTTTCGGTGGCATGGGCATTATTGTTCTATCAGTAGCAATTCTACCTTTACTAGGTGTCGGTGGTATGCAGTTA
TATAAAGCGGAAGTATCAGGTCAATGGAAAGATGATAAAATCGCCCCTAAAATCTCCAGCACTGCCAAAGCACTTTGGAT
GGTATATCTATTACTTACTTTCTTATGCTTTATCTCTTATCTATTAGTTGGTGTAGAACCATTTGATGCGATATGCTATA
CATTCTCAACAGTATCAACTGGCGGTTTTGCGCCTTCGGATGCAAGCATGACAGATAAGCCATTGGGAATGCTTATTGTA
TGTGCAATCTTTCTTTTCTTAGGTGCTACTAGTTTTAAAGCCCATTATATAGCTCTGTCAAAATTTAAAATAAGTCATTA
TTTTAGAAATATCGAGTTTAAAGCATATTTTTACTTCTTATTTTTTACCTCATTTATTGTATGTATCACTATAATTGCAC
ATACAAATGACCTTTCAAATATTTTCTCAATAGTTACTAATAGCATTTTTCAAGTAATATCCATCAGCTCAAGTGCTGGC
TTTGTTTCTGATAATAACTATTACTTATGGCCTAGCTTCTTGCCAATTATGTTAATGTTTATTGCCATAATTGGTGGTTG
TGGTGGCTCTACCGCTGGTGGCTTAAAGATGATTAGAGCAATTTTATTTAAAGAAAAAGCTATACTTGAGGCTAAACGTG
TCATCCATCCACAAGGGGTTTTCACTGTTAAATTAGGTGATATCCATATATCAGAACAAGCTCTTAATAGAGTTTCTGGA
TTTATCTCTGTTTATATTATAATTTTTGCTGGTGGTTGGTTAGCCTTGCTAGGTTGCGGTCTAGATATCCCTACAGCATT
CTCAACAATTGCTACCACTTTGTCTAATGTGGGTCCGGGACTAGGTGATATTGGTTCAAATTTTAAAAATCTCCCTAAAG
AAGCTCTATGGATATGCAACTTTGCGATGATTGCAGGACGTCTTGAGATATTTACAATTCTAGTATTATTTATGCCAGAT
TTTTGGAGAAAATAA

Upstream 100 bases:

>100_bases
TCTTAAATACTAATTATAAATTATCTTGTAGCTTGTGAGTAATTATACTAAACTAAACATCAAAGTCACCCATAAACGTT
AAGCTTTAAAGCATTAGCAG

Downstream 100 bases:

>100_bases
ACACTTTAAATATATTAAAGACCCCCAGACTCAACCAAATAAGATAAGTTACCAACCCTATCATACTCAATAGCATTTGC
ATATGCGATAACTTTGTAAT

Product: potassium uptake protein

Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MMLSQKPKIIGIFLMFLSLTMLSPLLVDYIYDEDNAYPFVLNFTVTFLCGFLLWFISRKSNKKLSNRDGFLIVTLVWIFV
TVFGAIPYMSFPGLNLSFTNAVFESVSGFTTTGGTVIEGLDKLPHSILFYRQQTEFFGGMGIIVLSVAILPLLGVGGMQL
YKAEVSGQWKDDKIAPKISSTAKALWMVYLLLTFLCFISYLLVGVEPFDAICYTFSTVSTGGFAPSDASMTDKPLGMLIV
CAIFLFLGATSFKAHYIALSKFKISHYFRNIEFKAYFYFLFFTSFIVCITIIAHTNDLSNIFSIVTNSIFQVISISSSAG
FVSDNNYYLWPSFLPIMLMFIAIIGGCGGSTAGGLKMIRAILFKEKAILEAKRVIHPQGVFTVKLGDIHISEQALNRVSG
FISVYIIIFAGGWLALLGCGLDIPTAFSTIATTLSNVGPGLGDIGSNFKNLPKEALWICNFAMIAGRLEIFTILVLFMPD
FWRK

Sequences:

>Translated_484_residues
MMLSQKPKIIGIFLMFLSLTMLSPLLVDYIYDEDNAYPFVLNFTVTFLCGFLLWFISRKSNKKLSNRDGFLIVTLVWIFV
TVFGAIPYMSFPGLNLSFTNAVFESVSGFTTTGGTVIEGLDKLPHSILFYRQQTEFFGGMGIIVLSVAILPLLGVGGMQL
YKAEVSGQWKDDKIAPKISSTAKALWMVYLLLTFLCFISYLLVGVEPFDAICYTFSTVSTGGFAPSDASMTDKPLGMLIV
CAIFLFLGATSFKAHYIALSKFKISHYFRNIEFKAYFYFLFFTSFIVCITIIAHTNDLSNIFSIVTNSIFQVISISSSAG
FVSDNNYYLWPSFLPIMLMFIAIIGGCGGSTAGGLKMIRAILFKEKAILEAKRVIHPQGVFTVKLGDIHISEQALNRVSG
FISVYIIIFAGGWLALLGCGLDIPTAFSTIATTLSNVGPGLGDIGSNFKNLPKEALWICNFAMIAGRLEIFTILVLFMPD
FWRK
>Mature_484_residues
MMLSQKPKIIGIFLMFLSLTMLSPLLVDYIYDEDNAYPFVLNFTVTFLCGFLLWFISRKSNKKLSNRDGFLIVTLVWIFV
TVFGAIPYMSFPGLNLSFTNAVFESVSGFTTTGGTVIEGLDKLPHSILFYRQQTEFFGGMGIIVLSVAILPLLGVGGMQL
YKAEVSGQWKDDKIAPKISSTAKALWMVYLLLTFLCFISYLLVGVEPFDAICYTFSTVSTGGFAPSDASMTDKPLGMLIV
CAIFLFLGATSFKAHYIALSKFKISHYFRNIEFKAYFYFLFFTSFIVCITIIAHTNDLSNIFSIVTNSIFQVISISSSAG
FVSDNNYYLWPSFLPIMLMFIAIIGGCGGSTAGGLKMIRAILFKEKAILEAKRVIHPQGVFTVKLGDIHISEQALNRVSG
FISVYIIIFAGGWLALLGCGLDIPTAFSTIATTLSNVGPGLGDIGSNFKNLPKEALWICNFAMIAGRLEIFTILVLFMPD
FWRK

Specific function: Low-affinity potassium transport system. Interacts with trk system potassium uptake protein trkA and requires trkE for transport activity [H]

COG id: COG0168

COG function: function code P; Trk-type K+ transport systems, membrane components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trkH potassium transport family [H]

Homologues:

Organism=Escherichia coli, GI48994987, Length=479, Percent_Identity=43.8413361169102, Blast_Score=362, Evalue=1e-101,
Organism=Escherichia coli, GI1787626, Length=478, Percent_Identity=35.3556485355649, Blast_Score=286, Evalue=2e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003445
- InterPro:   IPR004772 [H]

Pfam domain/function: PF02386 TrkH [H]

EC number: NA

Molecular weight: Translated: 53594; Mature: 53594

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLSQKPKIIGIFLMFLSLTMLSPLLVDYIYDEDNAYPFVLNFTVTFLCGFLLWFISRKS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCC
NKKLSNRDGFLIVTLVWIFVTVFGAIPYMSFPGLNLSFTNAVFESVSGFTTTGGTVIEGL
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHH
DKLPHSILFYRQQTEFFGGMGIIVLSVAILPLLGVGGMQLYKAEVSGQWKDDKIAPKISS
HHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCCHHH
TAKALWMVYLLLTFLCFISYLLVGVEPFDAICYTFSTVSTGGFAPSDASMTDKPLGMLIV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
CAIFLFLGATSFKAHYIALSKFKISHYFRNIEFKAYFYFLFFTSFIVCITIIAHTNDLSN
HHHHHHHCCCCCHHHEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IFSIVTNSIFQVISISSSAGFVSDNNYYLWPSFLPIMLMFIAIIGGCGGSTAGGLKMIRA
HHHHHHHHHHHHHEECCCCCEEECCCEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ILFKEKAILEAKRVIHPQGVFTVKLGDIHISEQALNRVSGFISVYIIIFAGGWLALLGCG
HHHHHHHHHHHHHHCCCCCEEEEEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDIPTAFSTIATTLSNVGPGLGDIGSNFKNLPKEALWICNFAMIAGRLEIFTILVLFMPD
CCCHHHHHHHHHHHHHCCCCCCHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWRK
HHCC
>Mature Secondary Structure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HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]

Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]