| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is trkH [H]
Identifier: 89256977
GI number: 89256977
Start: 1639985
End: 1641439
Strand: Direct
Name: trkH [H]
Synonym: FTL_1708
Alternate gene names: 89256977
Gene position: 1639985-1641439 (Clockwise)
Preceding gene: 89256975
Following gene: 89256982
Centisome position: 86.5
GC content: 33.81
Gene sequence:
>1455_bases ATGATGTTAAGCCAGAAACCAAAAATAATTGGTATATTTTTAATGTTCCTTAGCCTTACCATGCTTAGTCCTTTATTGGT TGACTATATATATGATGAAGATAATGCATATCCATTTGTGTTGAATTTTACAGTAACATTTTTATGTGGTTTTTTGCTTT GGTTTATTTCACGTAAATCAAATAAGAAACTATCAAATAGAGATGGTTTTCTTATAGTTACACTCGTTTGGATATTTGTA ACAGTCTTTGGTGCAATACCATATATGTCTTTTCCTGGACTAAATCTATCCTTTACTAATGCAGTATTTGAGTCTGTTTC TGGATTTACTACAACTGGTGGTACTGTGATTGAAGGACTTGATAAGCTTCCTCATAGCATTTTATTTTATCGACAACAAA CTGAATTTTTCGGTGGCATGGGCATTATTGTTCTATCAGTAGCAATTCTACCTTTACTAGGTGTCGGTGGTATGCAGTTA TATAAAGCGGAAGTATCAGGTCAATGGAAAGATGATAAAATCGCCCCTAAAATCTCCAGCACTGCCAAAGCACTTTGGAT GGTATATCTATTACTTACTTTCTTATGCTTTATCTCTTATCTATTAGTTGGTGTAGAACCATTTGATGCGATATGCTATA CATTCTCAACAGTATCAACTGGCGGTTTTGCGCCTTCGGATGCAAGCATGACAGATAAGCCATTGGGAATGCTTATTGTA TGTGCAATCTTTCTTTTCTTAGGTGCTACTAGTTTTAAAGCCCATTATATAGCTCTGTCAAAATTTAAAATAAGTCATTA TTTTAGAAATATCGAGTTTAAAGCATATTTTTACTTCTTATTTTTTACCTCATTTATTGTATGTATCACTATAATTGCAC ATACAAATGACCTTTCAAATATTTTCTCAATAGTTACTAATAGCATTTTTCAAGTAATATCCATCAGCTCAAGTGCTGGC TTTGTTTCTGATAATAACTATTACTTATGGCCTAGCTTCTTGCCAATTATGTTAATGTTTATTGCCATAATTGGTGGTTG TGGTGGCTCTACCGCTGGTGGCTTAAAGATGATTAGAGCAATTTTATTTAAAGAAAAAGCTATACTTGAGGCTAAACGTG TCATCCATCCACAAGGGGTTTTCACTGTTAAATTAGGTGATATCCATATATCAGAACAAGCTCTTAATAGAGTTTCTGGA TTTATCTCTGTTTATATTATAATTTTTGCTGGTGGTTGGTTAGCCTTGCTAGGTTGCGGTCTAGATATCCCTACAGCATT CTCAACAATTGCTACCACTTTGTCTAATGTGGGTCCGGGACTAGGTGATATTGGTTCAAATTTTAAAAATCTCCCTAAAG AAGCTCTATGGATATGCAACTTTGCGATGATTGCAGGACGTCTTGAGATATTTACAATTCTAGTATTATTTATGCCAGAT TTTTGGAGAAAATAA
Upstream 100 bases:
>100_bases TCTTAAATACTAATTATAAATTATCTTGTAGCTTGTGAGTAATTATACTAAACTAAACATCAAAGTCACCCATAAACGTT AAGCTTTAAAGCATTAGCAG
Downstream 100 bases:
>100_bases ACACTTTAAATATATTAAAGACCCCCAGACTCAACCAAATAAGATAAGTTACCAACCCTATCATACTCAATAGCATTTGC ATATGCGATAACTTTGTAAT
Product: potassium uptake protein
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MMLSQKPKIIGIFLMFLSLTMLSPLLVDYIYDEDNAYPFVLNFTVTFLCGFLLWFISRKSNKKLSNRDGFLIVTLVWIFV TVFGAIPYMSFPGLNLSFTNAVFESVSGFTTTGGTVIEGLDKLPHSILFYRQQTEFFGGMGIIVLSVAILPLLGVGGMQL YKAEVSGQWKDDKIAPKISSTAKALWMVYLLLTFLCFISYLLVGVEPFDAICYTFSTVSTGGFAPSDASMTDKPLGMLIV CAIFLFLGATSFKAHYIALSKFKISHYFRNIEFKAYFYFLFFTSFIVCITIIAHTNDLSNIFSIVTNSIFQVISISSSAG FVSDNNYYLWPSFLPIMLMFIAIIGGCGGSTAGGLKMIRAILFKEKAILEAKRVIHPQGVFTVKLGDIHISEQALNRVSG FISVYIIIFAGGWLALLGCGLDIPTAFSTIATTLSNVGPGLGDIGSNFKNLPKEALWICNFAMIAGRLEIFTILVLFMPD FWRK
Sequences:
>Translated_484_residues MMLSQKPKIIGIFLMFLSLTMLSPLLVDYIYDEDNAYPFVLNFTVTFLCGFLLWFISRKSNKKLSNRDGFLIVTLVWIFV TVFGAIPYMSFPGLNLSFTNAVFESVSGFTTTGGTVIEGLDKLPHSILFYRQQTEFFGGMGIIVLSVAILPLLGVGGMQL YKAEVSGQWKDDKIAPKISSTAKALWMVYLLLTFLCFISYLLVGVEPFDAICYTFSTVSTGGFAPSDASMTDKPLGMLIV CAIFLFLGATSFKAHYIALSKFKISHYFRNIEFKAYFYFLFFTSFIVCITIIAHTNDLSNIFSIVTNSIFQVISISSSAG FVSDNNYYLWPSFLPIMLMFIAIIGGCGGSTAGGLKMIRAILFKEKAILEAKRVIHPQGVFTVKLGDIHISEQALNRVSG FISVYIIIFAGGWLALLGCGLDIPTAFSTIATTLSNVGPGLGDIGSNFKNLPKEALWICNFAMIAGRLEIFTILVLFMPD FWRK >Mature_484_residues MMLSQKPKIIGIFLMFLSLTMLSPLLVDYIYDEDNAYPFVLNFTVTFLCGFLLWFISRKSNKKLSNRDGFLIVTLVWIFV TVFGAIPYMSFPGLNLSFTNAVFESVSGFTTTGGTVIEGLDKLPHSILFYRQQTEFFGGMGIIVLSVAILPLLGVGGMQL YKAEVSGQWKDDKIAPKISSTAKALWMVYLLLTFLCFISYLLVGVEPFDAICYTFSTVSTGGFAPSDASMTDKPLGMLIV CAIFLFLGATSFKAHYIALSKFKISHYFRNIEFKAYFYFLFFTSFIVCITIIAHTNDLSNIFSIVTNSIFQVISISSSAG FVSDNNYYLWPSFLPIMLMFIAIIGGCGGSTAGGLKMIRAILFKEKAILEAKRVIHPQGVFTVKLGDIHISEQALNRVSG FISVYIIIFAGGWLALLGCGLDIPTAFSTIATTLSNVGPGLGDIGSNFKNLPKEALWICNFAMIAGRLEIFTILVLFMPD FWRK
Specific function: Low-affinity potassium transport system. Interacts with trk system potassium uptake protein trkA and requires trkE for transport activity [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family [H]
Homologues:
Organism=Escherichia coli, GI48994987, Length=479, Percent_Identity=43.8413361169102, Blast_Score=362, Evalue=1e-101, Organism=Escherichia coli, GI1787626, Length=478, Percent_Identity=35.3556485355649, Blast_Score=286, Evalue=2e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 53594; Mature: 53594
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLSQKPKIIGIFLMFLSLTMLSPLLVDYIYDEDNAYPFVLNFTVTFLCGFLLWFISRKS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCC NKKLSNRDGFLIVTLVWIFVTVFGAIPYMSFPGLNLSFTNAVFESVSGFTTTGGTVIEGL CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHH DKLPHSILFYRQQTEFFGGMGIIVLSVAILPLLGVGGMQLYKAEVSGQWKDDKIAPKISS HHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCCHHH TAKALWMVYLLLTFLCFISYLLVGVEPFDAICYTFSTVSTGGFAPSDASMTDKPLGMLIV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH CAIFLFLGATSFKAHYIALSKFKISHYFRNIEFKAYFYFLFFTSFIVCITIIAHTNDLSN HHHHHHHCCCCCHHHEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH IFSIVTNSIFQVISISSSAGFVSDNNYYLWPSFLPIMLMFIAIIGGCGGSTAGGLKMIRA HHHHHHHHHHHHHEECCCCCEEECCCEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH ILFKEKAILEAKRVIHPQGVFTVKLGDIHISEQALNRVSGFISVYIIIFAGGWLALLGCG HHHHHHHHHHHHHHCCCCCEEEEEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LDIPTAFSTIATTLSNVGPGLGDIGSNFKNLPKEALWICNFAMIAGRLEIFTILVLFMPD CCCHHHHHHHHHHHHHCCCCCCHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWRK HHCC >Mature Secondary Structure MMLSQKPKIIGIFLMFLSLTMLSPLLVDYIYDEDNAYPFVLNFTVTFLCGFLLWFISRKS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCC NKKLSNRDGFLIVTLVWIFVTVFGAIPYMSFPGLNLSFTNAVFESVSGFTTTGGTVIEGL CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHH DKLPHSILFYRQQTEFFGGMGIIVLSVAILPLLGVGGMQLYKAEVSGQWKDDKIAPKISS HHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCCHHH TAKALWMVYLLLTFLCFISYLLVGVEPFDAICYTFSTVSTGGFAPSDASMTDKPLGMLIV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH CAIFLFLGATSFKAHYIALSKFKISHYFRNIEFKAYFYFLFFTSFIVCITIIAHTNDLSN HHHHHHHCCCCCHHHEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH IFSIVTNSIFQVISISSSAGFVSDNNYYLWPSFLPIMLMFIAIIGGCGGSTAGGLKMIRA HHHHHHHHHHHHHEECCCCCEEECCCEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH ILFKEKAILEAKRVIHPQGVFTVKLGDIHISEQALNRVSGFISVYIIIFAGGWLALLGCG HHHHHHHHHHHHHHCCCCCEEEEEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LDIPTAFSTIATTLSNVGPGLGDIGSNFKNLPKEALWICNFAMIAGRLEIFTILVLFMPD CCCHHHHHHHHHHHHHCCCCCCHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWRK HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]