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The map label for this gene is yhdP [H]

Identifier: 89256967

GI number: 89256967

Start: 1627888

End: 1628217

Strand: Reverse

Name: yhdP [H]

Synonym: FTL_1698

Alternate gene names: 89256967

Gene position: 1628217-1627888 (Counterclockwise)

Preceding gene: 89256968

Following gene: 89256966

Centisome position: 85.88

GC content: 31.52

Gene sequence:

>330_bases
TTGGAACCGCTTTTTATATTTCTTGGGGTTACAGCTAATCTTTCAAAATTTATTGCTTTTGCAACTGGTTTTGCACTTAT
ATCATTTTTGCATATAGTCATAGGTGAGCTTATGCCAAAATCTATGGCGATTAGACAAACTGAGAGATTATCACTACTGA
CATGCATTCCTTTGTATATATTTTATTGGGTGATGTTTCCTTTTATATGGATATTAAATGCTACAGCAAATAAACTTTTA
GAGCTTTTTAAGTTAGATGTAGTTGGCGAAGCTGAGTATGGCTATACTACAGATGAGATTAAAGTGATTTTAAAAAGTAG
CTATCTTTAA

Upstream 100 bases:

>100_bases
ACATAATAATATTGATATCTATCTCTCTGCTTGTCAATTTGGTATTACGCTAGCATCACTAGGTTTAGGTTGGATTGGTG
AACCAGCTTTTTCTAAACTT

Downstream 100 bases:

>100_bases
AAACCTCTAACGGAGGAACATCAAGATATTTTGCTGAGAATGGTTGAGTTCGCGCATTTACATGCCATAGACGCGATGCG
TCCAATCAAAGAAATGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MEPLFIFLGVTANLSKFIAFATGFALISFLHIVIGELMPKSMAIRQTERLSLLTCIPLYIFYWVMFPFIWILNATANKLL
ELFKLDVVGEAEYGYTTDEIKVILKSSYL

Sequences:

>Translated_109_residues
MEPLFIFLGVTANLSKFIAFATGFALISFLHIVIGELMPKSMAIRQTERLSLLTCIPLYIFYWVMFPFIWILNATANKLL
ELFKLDVVGEAEYGYTTDEIKVILKSSYL
>Mature_109_residues
MEPLFIFLGVTANLSKFIAFATGFALISFLHIVIGELMPKSMAIRQTERLSLLTCIPLYIFYWVMFPFIWILNATANKLL
ELFKLDVVGEAEYGYTTDEIKVILKSSYL

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=108, Percent_Identity=36.1111111111111, Blast_Score=83, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 12478; Mature: 12478

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPLFIFLGVTANLSKFIAFATGFALISFLHIVIGELMPKSMAIRQTERLSLLTCIPLYI
CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
FYWVMFPFIWILNATANKLLELFKLDVVGEAEYGYTTDEIKVILKSSYL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MEPLFIFLGVTANLSKFIAFATGFALISFLHIVIGELMPKSMAIRQTERLSLLTCIPLYI
CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
FYWVMFPFIWILNATANKLLELFKLDVVGEAEYGYTTDEIKVILKSSYL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]