| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256966
Identifier: 89256966
GI number: 89256966
Start: 1627179
End: 1627643
Strand: Reverse
Name: 89256966
Synonym: FTL_1697
Alternate gene names: NA
Gene position: 1627643-1627179 (Counterclockwise)
Preceding gene: 89256967
Following gene: 89256965
Centisome position: 85.85
GC content: 29.68
Gene sequence:
>465_bases ATGAAACAAGATTTACGTCCAATTCTAAAAGTATCATACCATGATCGATTAATAGATGTACTAAATAAGTTTCAACAAGG CAGACCACACTTTGCTCTAGTTTATAAGAAAAATCAACTTATTGGCTTTATCACTCTAGATAATCTCTTGACTATATTAA TTGGTAGAATATCTGATGAATTTCATCTGGTAAAAGAACCATGGATTACATTAGCTAACAATAAATTTTTGATAAAGGCT GATGCTCCAGTATATGCAATAGAAAGATTAGCCGATATAGATTTATCAGAATATCCTGCTGATACCGTTTTAGATTTGTT ACAAACTGTTTTGGCTGAGAAAATCTCTACTAATACTATGTGGGAGAATGATAAATTTATACTCAAAGCATATAGGGTTG ATGAAGATGGCTTAAAAGATGTTATCTTGGAATTAAAATCATTAGATCAAATAAAATTTAACTAG
Upstream 100 bases:
>100_bases AAAGAGTTTCTAAAGGTACCCAGTTTATCAAAAAGACAAAAATAACATTATTGGAGTTGTTCATACAAAAGATATTTTAT GTGCTTTAGATACAGAACTT
Downstream 100 bases:
>100_bases CAAAAAGTGATTTAGTAAAAAAGCTATGCTACTATATTGCAACAGTTTTAATTTTGAAAAAGATTAAGTCGTGAAAGCTA GGTTTTCTTCTACAAGTAAA
Product: metal ion transporter
Products: NA
Alternate protein names: Metal Ion Transporter; HlyC/CorC Family Transporter; CBS Domain-Containing Protein; Hemolysin Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKQDLRPILKVSYHDRLIDVLNKFQQGRPHFALVYKKNQLIGFITLDNLLTILIGRISDEFHLVKEPWITLANNKFLIKA DAPVYAIERLADIDLSEYPADTVLDLLQTVLAEKISTNTMWENDKFILKAYRVDEDGLKDVILELKSLDQIKFN
Sequences:
>Translated_154_residues MKQDLRPILKVSYHDRLIDVLNKFQQGRPHFALVYKKNQLIGFITLDNLLTILIGRISDEFHLVKEPWITLANNKFLIKA DAPVYAIERLADIDLSEYPADTVLDLLQTVLAEKISTNTMWENDKFILKAYRVDEDGLKDVILELKSLDQIKFN >Mature_154_residues MKQDLRPILKVSYHDRLIDVLNKFQQGRPHFALVYKKNQLIGFITLDNLLTILIGRISDEFHLVKEPWITLANNKFLIKA DAPVYAIERLADIDLSEYPADTVLDLLQTVLAEKISTNTMWENDKFILKAYRVDEDGLKDVILELKSLDQIKFN
Specific function: Unknown
COG id: COG1253
COG function: function code R; Hemolysins and related proteins containing CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17885; Mature: 17885
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQDLRPILKVSYHDRLIDVLNKFQQGRPHFALVYKKNQLIGFITLDNLLTILIGRISDE CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHCCCC FHLVKEPWITLANNKFLIKADAPVYAIERLADIDLSEYPADTVLDLLQTVLAEKISTNTM CEEECCCEEEECCCEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC WENDKFILKAYRVDEDGLKDVILELKSLDQIKFN CCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKQDLRPILKVSYHDRLIDVLNKFQQGRPHFALVYKKNQLIGFITLDNLLTILIGRISDE CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHCCCC FHLVKEPWITLANNKFLIKADAPVYAIERLADIDLSEYPADTVLDLLQTVLAEKISTNTM CEEECCCEEEECCCEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC WENDKFILKAYRVDEDGLKDVILELKSLDQIKFN CCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA