| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256962
Identifier: 89256962
GI number: 89256962
Start: 1624106
End: 1624579
Strand: Reverse
Name: 89256962
Synonym: FTL_1693
Alternate gene names: NA
Gene position: 1624579-1624106 (Counterclockwise)
Preceding gene: 89256963
Following gene: 89256961
Centisome position: 85.68
GC content: 29.32
Gene sequence:
>474_bases ATGTTAAAAATAAGTGCGATTTTTCTTGTGTTGATTGTCAGTATTTGTAATGTTTATGCGGCTAACTGTCAGCTTATAGA TGCTCAAAATGGTTCTAATGGTTTAGTAGAATTTAGTTGTGACCAAGATGTTTTGCTGGATGATAATAAAGTAATTTTTT ATATCGTTGGCAAGGATGTTGAAATTGATTCTGTCAAAGTATCTCGCGGTGATATTGATTTTACTATCGATCAAGTCACT AAAAATGTCAAACGAGTGAGTCTAAATATTGTCAAGAAAACTATTCTGGATTTTGAACTAGACTATATTGCTTATAGGCA GCAACCAGTTAAATTAATAATACAAGCCAAAAAAGATAGTAATCTTGATTACCAAATTCTATGGGGAAGGGTGGTAAAAA ACTCTTATACAAATACAGAAAATAACAATAACAATTTTCAATTTTATATAACAAAATCAAAACTTTTTAACTAG
Upstream 100 bases:
>100_bases GTTAGATATGGCTTAAAATTTATTATTACAAATAAAAATATATATATTGATGATTTTACTAATAAACAGCTTAGCGAAGT TGCTACATAGGTATTATTAA
Downstream 100 bases:
>100_bases CTACTTATTTTGATTTTGGTATTGTTCATCAAAGATTAGTTTAATTAAATCCTTAGTAGGGTAAGTTAGAACTTTATGCT AAAATAACTGTGATTGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MLKISAIFLVLIVSICNVYAANCQLIDAQNGSNGLVEFSCDQDVLLDDNKVIFYIVGKDVEIDSVKVSRGDIDFTIDQVT KNVKRVSLNIVKKTILDFELDYIAYRQQPVKLIIQAKKDSNLDYQILWGRVVKNSYTNTENNNNNFQFYITKSKLFN
Sequences:
>Translated_157_residues MLKISAIFLVLIVSICNVYAANCQLIDAQNGSNGLVEFSCDQDVLLDDNKVIFYIVGKDVEIDSVKVSRGDIDFTIDQVT KNVKRVSLNIVKKTILDFELDYIAYRQQPVKLIIQAKKDSNLDYQILWGRVVKNSYTNTENNNNNFQFYITKSKLFN >Mature_157_residues MLKISAIFLVLIVSICNVYAANCQLIDAQNGSNGLVEFSCDQDVLLDDNKVIFYIVGKDVEIDSVKVSRGDIDFTIDQVT KNVKRVSLNIVKKTILDFELDYIAYRQQPVKLIIQAKKDSNLDYQILWGRVVKNSYTNTENNNNNFQFYITKSKLFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17970; Mature: 17970
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKISAIFLVLIVSICNVYAANCQLIDAQNGSNGLVEFSCDQDVLLDDNKVIFYIVGKDV CEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCEEEECCCEEEEEECCCE EIDSVKVSRGDIDFTIDQVTKNVKRVSLNIVKKTILDFELDYIAYRQQPVKLIIQAKKDS EECEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEHHHEEECCCCEEEEEEECCCC NLDYQILWGRVVKNSYTNTENNNNNFQFYITKSKLFN CCCEEEEEEEEHHCCCCCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MLKISAIFLVLIVSICNVYAANCQLIDAQNGSNGLVEFSCDQDVLLDDNKVIFYIVGKDV CEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCEEEECCCEEEEEECCCE EIDSVKVSRGDIDFTIDQVTKNVKRVSLNIVKKTILDFELDYIAYRQQPVKLIIQAKKDS EECEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEHHHEEECCCCEEEEEEECCCC NLDYQILWGRVVKNSYTNTENNNNNFQFYITKSKLFN CCCEEEEEEEEHHCCCCCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA