| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256959
Identifier: 89256959
GI number: 89256959
Start: 1622338
End: 1623267
Strand: Reverse
Name: 89256959
Synonym: FTL_1690
Alternate gene names: NA
Gene position: 1623267-1622338 (Counterclockwise)
Preceding gene: 89256960
Following gene: 89256958
Centisome position: 85.62
GC content: 32.26
Gene sequence:
>930_bases ATGTCATTAAAACTTAGTCAAAAAAAGCTAGCAGGTTTAACAATCATAGAGCTTCTAATTTCTACTGCTATAGCTGTAAT GATACTTTCTGCATTAATTACTACTTATATCGCTGTAAAGAGTAAATATAGCGAATATAAAGATAAAACTACAACAGAAG CAAAAGAATTATTGGTAAAAAATATATTCTATAACTTTGTCAAGGACGTTGGTTTTGCATGTAAATTTGGCTATTCACAA CAAACATACTATGATAGAACATCTGATTCTTTGGATAGTATTTTTTATAGTCCTGCTATGATTCGCGTTGGTAGATTACC TTTGGCTACTTCAAGTCATTTCCCACAATCATTAGAGGACGGCTGCTCAGGAGATTGCTATCAGACAGGGACAGATTATA TAATGATTAAGAAAGAAGAAAGTCATTCTAGCCTTACCCAAATAAACTCACCGAGTACAACTTTACATCTTCGCTCTGTT GATGTTCTTACAGCAGATGATTATTTATTTTTATGTAATAAAAATAGTATTAATTTAGTGAAAGCATCAAATATCAACAG TGGCTCAAGTATTGTTAGTTTATCACAATCACCTCAAGGTGGCGATTATTATCCTGGTGATTATGTTGGTAAATACTCGC TTGAGATTCTTTATGTTAGAGATACTGGTGAACAAGATAGTCAAGGTCAAGATATTTATTCACTATATGTATATATTAAA GATAGTGGTGCAAATGGAATGTCTTATGAGCTTGTAAGAGGAGTGGAGAACTTACAAGTTGAATATGCAACAGTTAGTAA TAATGTCGTAACTTGGAATAATGTTACTACGGATATTGACATAAATAGCACTAGTCATCCTGCGTTGAAAATATCTTATA GTATTGCTGGTCAGACATTTAGCAAAATAATTAGTATATCGGTTTCGTAG
Upstream 100 bases:
>100_bases AGATATAACGCCGGCTATTAGATGGCAGTGTACTGCTTTTGGATTTGATAGTGAGTTACTGCCTTCATGGTGTGTTTTAT AGTTTTAGAATGGAGATTTA
Downstream 100 bases:
>100_bases AGTATGGTAGCAAAAAATAGAGGATCATCATTACTAGCAACTTTAATTTTTGCTTTTGTATTAATGATAGTGATATCAGC TCTTGCGTATAACTTCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSLKLSQKKLAGLTIIELLISTAIAVMILSALITTYIAVKSKYSEYKDKTTTEAKELLVKNIFYNFVKDVGFACKFGYSQ QTYYDRTSDSLDSIFYSPAMIRVGRLPLATSSHFPQSLEDGCSGDCYQTGTDYIMIKKEESHSSLTQINSPSTTLHLRSV DVLTADDYLFLCNKNSINLVKASNINSGSSIVSLSQSPQGGDYYPGDYVGKYSLEILYVRDTGEQDSQGQDIYSLYVYIK DSGANGMSYELVRGVENLQVEYATVSNNVVTWNNVTTDIDINSTSHPALKISYSIAGQTFSKIISISVS
Sequences:
>Translated_309_residues MSLKLSQKKLAGLTIIELLISTAIAVMILSALITTYIAVKSKYSEYKDKTTTEAKELLVKNIFYNFVKDVGFACKFGYSQ QTYYDRTSDSLDSIFYSPAMIRVGRLPLATSSHFPQSLEDGCSGDCYQTGTDYIMIKKEESHSSLTQINSPSTTLHLRSV DVLTADDYLFLCNKNSINLVKASNINSGSSIVSLSQSPQGGDYYPGDYVGKYSLEILYVRDTGEQDSQGQDIYSLYVYIK DSGANGMSYELVRGVENLQVEYATVSNNVVTWNNVTTDIDINSTSHPALKISYSIAGQTFSKIISISVS >Mature_308_residues SLKLSQKKLAGLTIIELLISTAIAVMILSALITTYIAVKSKYSEYKDKTTTEAKELLVKNIFYNFVKDVGFACKFGYSQQ TYYDRTSDSLDSIFYSPAMIRVGRLPLATSSHFPQSLEDGCSGDCYQTGTDYIMIKKEESHSSLTQINSPSTTLHLRSVD VLTADDYLFLCNKNSINLVKASNINSGSSIVSLSQSPQGGDYYPGDYVGKYSLEILYVRDTGEQDSQGQDIYSLYVYIKD SGANGMSYELVRGVENLQVEYATVSNNVVTWNNVTTDIDINSTSHPALKISYSIAGQTFSKIISISVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34110; Mature: 33979
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKLSQKKLAGLTIIELLISTAIAVMILSALITTYIAVKSKYSEYKDKTTTEAKELLVK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH NIFYNFVKDVGFACKFGYSQQTYYDRTSDSLDSIFYSPAMIRVGRLPLATSSHFPQSLED HHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHCCHHEEECCCCCCCCCCCCHHHHC GCSGDCYQTGTDYIMIKKEESHSSLTQINSPSTTLHLRSVDVLTADDYLFLCNKNSINLV CCCCCCEECCCCEEEEEECCCCCHHHHCCCCCCEEEEEEEEEEECCCEEEEECCCCEEEE KASNINSGSSIVSLSQSPQGGDYYPGDYVGKYSLEILYVRDTGEQDSQGQDIYSLYVYIK EECCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEEE DSGANGMSYELVRGVENLQVEYATVSNNVVTWNNVTTDIDINSTSHPALKISYSIAGQTF ECCCCCCHHHHHHCHHHCEEEEEEECCCEEEECCEEEEEEECCCCCCEEEEEEEECCHHH SKIISISVS EEEEEEECC >Mature Secondary Structure SLKLSQKKLAGLTIIELLISTAIAVMILSALITTYIAVKSKYSEYKDKTTTEAKELLVK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH NIFYNFVKDVGFACKFGYSQQTYYDRTSDSLDSIFYSPAMIRVGRLPLATSSHFPQSLED HHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHCCHHEEECCCCCCCCCCCCHHHHC GCSGDCYQTGTDYIMIKKEESHSSLTQINSPSTTLHLRSVDVLTADDYLFLCNKNSINLV CCCCCCEECCCCEEEEEECCCCCHHHHCCCCCCEEEEEEEEEEECCCEEEEECCCCEEEE KASNINSGSSIVSLSQSPQGGDYYPGDYVGKYSLEILYVRDTGEQDSQGQDIYSLYVYIK EECCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEEE DSGANGMSYELVRGVENLQVEYATVSNNVVTWNNVTTDIDINSTSHPALKISYSIAGQTF ECCCCCCHHHHHHCHHHCEEEEEEECCCEEEECCEEEEEEECCCCCCEEEEEEEECCHHH SKIISISVS EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA