| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is mdtL [H]
Identifier: 89256955
GI number: 89256955
Start: 1618452
End: 1619639
Strand: Direct
Name: mdtL [H]
Synonym: FTL_1685
Alternate gene names: 89256955
Gene position: 1618452-1619639 (Clockwise)
Preceding gene: 89256954
Following gene: 89256956
Centisome position: 85.36
GC content: 31.57
Gene sequence:
>1188_bases ATGTCTAATGATCCTTTTAAGAGGATATCCTCTGATAAAACTGTTATCTTTATAATCTGTCTTTTTGGTTTGATGTCACA ATTTGCTACGGATAGTTTTACACCATCATTGCCACATATTGCTGAATATTTTCATGCAGCAGCTAAAGATATTAAGCTAA CAGTAGGCGTATATTTTTTTGGGATGACTTGCTCGATGTTGGGCTTTGGTTATTTATCAGATAAGTATGGGCGTAAACCA GCACTACTAGCTGGGTACTTAATATTTTGTGTTGCAAGTATTCTATGTATGATAGCCGAGAGTGAAACACAGTTGCTGTT TTTTAGATTTTTACAAGGTATCGGTATGGGAAGTTCTTTTGTATTTTTCCGTGCGATTATGAAAGATGTTTTTAGTGATA GTCAATCACTTGCTAAAGCAAGCCTTGTAATTACAAGCATAGTTTCATTGACTCCTCCTTTAGCGCCAATTACGGGAGGT ATCATTCAAGAAACCATTGGTTGGCGTGGTAATTTTACTTTACATTCAATAATGGCAATAATTATCACGGTTTTAATTAT AAAATATTTACATCTTAAAGCTATTCCTAAAAGGAATTATAACGTCTTAGATTCATATAAAAGGATATTAACACATAAGG TTTTTGTGCTAAATGCTATTTGTAGTGGTTTAGCATTGTCATTAGTTTTTGTTTTTGCGACACTTTCACCTTTTTTCTTT CAGATTAAATTAGGTTTTTCTGCTGTTGAATATTCATTTATATCAGCTGGGGTAATTATACCTTCAGCAATATTTTTAAT ATTATTTAAAAATATAATCAGTAGATTAGATATGAACAAAGTTATACTTTATTGCGGTTCCTTCTCTACATTAAGTGGTT TACTACTTGCTTTTTCTTATTTTATTTTTGGTTTAGATGCTAAAGTGATTGTTATCTTATGTGCTTTGGCATTTTGTGGT AATGTTTTTCAGTATACTGCTACATACGTGTGTGCGTATAGAGATATTCATACTGAAATAGGTGCATCGGCAATATTTGG ATTTATACAGATAGCTGTTACAACTATTTCATCATCACTTGTTTCTAGCATCACTTTACACAATCAGTTGGTTTTTGGTT TATTGATGGCAATACCACCATTTTTGATAGTGATACTAAAGATAATTGATATTAAAAAAGCCTTGTAA
Upstream 100 bases:
>100_bases CTAGTTAAATATAAAGATGCATTTAAAAAATATTTCCAAAAATAAAATTTAGATTATAATCTCTCCAACCCTTATTCATT ATTAAATTTAGGATTAGTAT
Downstream 100 bases:
>100_bases AGGATAGGGTTATATGATTAGGTTAGAAAGATTTACAGAAAGTAATATATCTGACCTTTTGTCTGAATTGAATCGCCATG ATATTCGTTTTTTATATCAA
Product: major facilitator transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSNDPFKRISSDKTVIFIICLFGLMSQFATDSFTPSLPHIAEYFHAAAKDIKLTVGVYFFGMTCSMLGFGYLSDKYGRKP ALLAGYLIFCVASILCMIAESETQLLFFRFLQGIGMGSSFVFFRAIMKDVFSDSQSLAKASLVITSIVSLTPPLAPITGG IIQETIGWRGNFTLHSIMAIIITVLIIKYLHLKAIPKRNYNVLDSYKRILTHKVFVLNAICSGLALSLVFVFATLSPFFF QIKLGFSAVEYSFISAGVIIPSAIFLILFKNIISRLDMNKVILYCGSFSTLSGLLLAFSYFIFGLDAKVIVILCALAFCG NVFQYTATYVCAYRDIHTEIGASAIFGFIQIAVTTISSSLVSSITLHNQLVFGLLMAIPPFLIVILKIIDIKKAL
Sequences:
>Translated_395_residues MSNDPFKRISSDKTVIFIICLFGLMSQFATDSFTPSLPHIAEYFHAAAKDIKLTVGVYFFGMTCSMLGFGYLSDKYGRKP ALLAGYLIFCVASILCMIAESETQLLFFRFLQGIGMGSSFVFFRAIMKDVFSDSQSLAKASLVITSIVSLTPPLAPITGG IIQETIGWRGNFTLHSIMAIIITVLIIKYLHLKAIPKRNYNVLDSYKRILTHKVFVLNAICSGLALSLVFVFATLSPFFF QIKLGFSAVEYSFISAGVIIPSAIFLILFKNIISRLDMNKVILYCGSFSTLSGLLLAFSYFIFGLDAKVIVILCALAFCG NVFQYTATYVCAYRDIHTEIGASAIFGFIQIAVTTISSSLVSSITLHNQLVFGLLMAIPPFLIVILKIIDIKKAL >Mature_394_residues SNDPFKRISSDKTVIFIICLFGLMSQFATDSFTPSLPHIAEYFHAAAKDIKLTVGVYFFGMTCSMLGFGYLSDKYGRKPA LLAGYLIFCVASILCMIAESETQLLFFRFLQGIGMGSSFVFFRAIMKDVFSDSQSLAKASLVITSIVSLTPPLAPITGGI IQETIGWRGNFTLHSIMAIIITVLIIKYLHLKAIPKRNYNVLDSYKRILTHKVFVLNAICSGLALSLVFVFATLSPFFFQ IKLGFSAVEYSFISAGVIIPSAIFLILFKNIISRLDMNKVILYCGSFSTLSGLLLAFSYFIFGLDAKVIVILCALAFCGN VFQYTATYVCAYRDIHTEIGASAIFGFIQIAVTTISSSLVSSITLHNQLVFGLLMAIPPFLIVILKIIDIKKAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. DHA1 family. MdtL (TC 2.A.1.2.22) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790146, Length=245, Percent_Identity=30.6122448979592, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI48994889, Length=248, Percent_Identity=29.0322580645161, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1788509, Length=244, Percent_Identity=26.2295081967213, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1790794, Length=227, Percent_Identity=24.2290748898678, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787065, Length=309, Percent_Identity=23.6245954692557, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI87082312, Length=191, Percent_Identity=24.0837696335079, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43510; Mature: 43378
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDPFKRISSDKTVIFIICLFGLMSQFATDSFTPSLPHIAEYFHAAAKDIKLTVGVYFF CCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GMTCSMLGFGYLSDKYGRKPALLAGYLIFCVASILCMIAESETQLLFFRFLQGIGMGSSF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH VFFRAIMKDVFSDSQSLAKASLVITSIVSLTPPLAPITGGIIQETIGWRGNFTLHSIMAI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH IITVLIIKYLHLKAIPKRNYNVLDSYKRILTHKVFVLNAICSGLALSLVFVFATLSPFFF HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIKLGFSAVEYSFISAGVIIPSAIFLILFKNIISRLDMNKVILYCGSFSTLSGLLLAFSY HEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHH FIFGLDAKVIVILCALAFCGNVFQYTATYVCAYRDIHTEIGASAIFGFIQIAVTTISSSL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSSITLHNQLVFGLLMAIPPFLIVILKIIDIKKAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNDPFKRISSDKTVIFIICLFGLMSQFATDSFTPSLPHIAEYFHAAAKDIKLTVGVYFF CCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GMTCSMLGFGYLSDKYGRKPALLAGYLIFCVASILCMIAESETQLLFFRFLQGIGMGSSF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH VFFRAIMKDVFSDSQSLAKASLVITSIVSLTPPLAPITGGIIQETIGWRGNFTLHSIMAI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH IITVLIIKYLHLKAIPKRNYNVLDSYKRILTHKVFVLNAICSGLALSLVFVFATLSPFFF HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIKLGFSAVEYSFISAGVIIPSAIFLILFKNIISRLDMNKVILYCGSFSTLSGLLLAFSY HEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHH FIFGLDAKVIVILCALAFCGNVFQYTATYVCAYRDIHTEIGASAIFGFIQIAVTTISSSL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSSITLHNQLVFGLLMAIPPFLIVILKIIDIKKAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]