| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256947
Identifier: 89256947
GI number: 89256947
Start: 1610197
End: 1610778
Strand: Direct
Name: 89256947
Synonym: FTL_1674
Alternate gene names: NA
Gene position: 1610197-1610778 (Clockwise)
Preceding gene: 89256946
Following gene: 89256951
Centisome position: 84.93
GC content: 28.18
Gene sequence:
>582_bases ATGGACAAGGATGTACTAGATATATATACAGACTATCTTATAAGCCAAACTAAGTATGCTACGGCTACAAAATTATCAGA CATATTAGATCAAGAAGTATCACATGACAAAATAACAAGATTTTTAAGCAAGCCATATTTGACAAGCTTAGAATTTTGGA AATATATAAAGCCTTTAGTTAGAAAACATAATAGCGAATCCGAAGTTCTTTGTTTGGATGATACAATTAGTGAAAAGCCA AGTACAGATGAAAATGATATAGTCTGTTGGCACCACTCTCATGCTAAAGGTGTTCATGTAAAGGGTATTAATATAGTCTC ATGTATACTTAGTACATCAAATTTATCTATTCCTATAGACTATGAAATAGTGAAAAAGTATAAGAGATATTATGATGAAA AAGATAAGCGCTATAAAAGAAGATCAAAAATTACTAAAAACCAAATGTTTCAAAATATGATAAATCGAGCAGTTATTAAT CAAGTTAAGTTTAAATATATTTTAACCTCCGTTCGACAATTATTTCATAGACAAACTCTTAGAATTATTGATTTTAATTG GGTTAATAATAAACTGAGCTAA
Upstream 100 bases:
>100_bases ACTTTAAACAAATATAACTTACTCACCTTACGCAAAAGTTGTAAGTTTTAAAAAGATATTTAGAATAATAGTCATACAAA GATTTTGTATTTTTTAAGAA
Downstream 100 bases:
>100_bases AGCAGCCATAAAATGAGTAAAAGGATTATTTATGGATCTATGTCTTGTGTGCCACAAAGTTACATTATTTTTGAGATAGT CAAAAATAGTCTCAATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MDKDVLDIYTDYLISQTKYATATKLSDILDQEVSHDKITRFLSKPYLTSLEFWKYIKPLVRKHNSESEVLCLDDTISEKP STDENDIVCWHHSHAKGVHVKGINIVSCILSTSNLSIPIDYEIVKKYKRYYDEKDKRYKRRSKITKNQMFQNMINRAVIN QVKFKYILTSVRQLFHRQTLRIIDFNWVNNKLS
Sequences:
>Translated_193_residues MDKDVLDIYTDYLISQTKYATATKLSDILDQEVSHDKITRFLSKPYLTSLEFWKYIKPLVRKHNSESEVLCLDDTISEKP STDENDIVCWHHSHAKGVHVKGINIVSCILSTSNLSIPIDYEIVKKYKRYYDEKDKRYKRRSKITKNQMFQNMINRAVIN QVKFKYILTSVRQLFHRQTLRIIDFNWVNNKLS >Mature_193_residues MDKDVLDIYTDYLISQTKYATATKLSDILDQEVSHDKITRFLSKPYLTSLEFWKYIKPLVRKHNSESEVLCLDDTISEKP STDENDIVCWHHSHAKGVHVKGINIVSCILSTSNLSIPIDYEIVKKYKRYYDEKDKRYKRRSKITKNQMFQNMINRAVIN QVKFKYILTSVRQLFHRQTLRIIDFNWVNNKLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22941; Mature: 22941
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKDVLDIYTDYLISQTKYATATKLSDILDQEVSHDKITRFLSKPYLTSLEFWKYIKPLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH RKHNSESEVLCLDDTISEKPSTDENDIVCWHHSHAKGVHVKGINIVSCILSTSNLSIPID HCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHCCCCCCCCC YEIVKKYKRYYDEKDKRYKRRSKITKNQMFQNMINRAVINQVKFKYILTSVRQLFHRQTL HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIIDFNWVNNKLS HEEEEECCCCCCC >Mature Secondary Structure MDKDVLDIYTDYLISQTKYATATKLSDILDQEVSHDKITRFLSKPYLTSLEFWKYIKPLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH RKHNSESEVLCLDDTISEKPSTDENDIVCWHHSHAKGVHVKGINIVSCILSTSNLSIPID HCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCEEECCHHHHHHHHHCCCCCCCCC YEIVKKYKRYYDEKDKRYKRRSKITKNQMFQNMINRAVINQVKFKYILTSVRQLFHRQTL HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIIDFNWVNNKLS HEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA