Click here to switch to the map view.

The map label for this gene is yegM [C]

Identifier: 89256944

GI number: 89256944

Start: 1604054

End: 1605427

Strand: Direct

Name: yegM [C]

Synonym: FTL_1671

Alternate gene names: 89256944

Gene position: 1604054-1605427 (Clockwise)

Preceding gene: 89256943

Following gene: 89256945

Centisome position: 84.6

GC content: 33.48

Gene sequence:

>1374_bases
GTGGACGTTAAGAAGACTTTTTTAAACATTAAACAAAAAATAAACTCAAGCAAAAGAAACTATGCTATTTTTGTTATCGC
AACTATAATTCTAGCCTGGCTTGTGCTTGGAAAACTTGGGATATCATTAGCAATTGTATATTTTATCTTCCAAATTAACT
ATATCAAGAATAAGCTCCATAAACTTAAAGATAAAAAAACTGCATCGATTGCTATTGTGGTTGCAACCCTAATCCTTTTT
GGAGGGATTTTTGGTTTTGCTGAATTTATTCAAAGCATGATTAAAAAAGGCATGGCAGCATATGTACCCCAACCTGTTGC
AGTAACATCATCTGTAGTTGAGAAAACTGATTGGAAACAAGTTATTAACACTATCGGTGAAGCTCAAGCAGTTCAATCTA
CAGCGATATCTTCACAGTCTGGTGGGATTGTTAGCGAAATTCATTTCAAGAGTGGTCAAGAAGTTAAAAAAGGTGATCTA
CTCTTTAAGCTAGATACTAGCCAACTTAAAGCCAATCTTGAAGAAGCGTTATCAAATCTTAAATTAGCTAAAATAACTAA
AGATCGCTATAACAAGCTCGTTGAACAAAAAGCCACATCAAAAGAATCTGCCGATAAGGCTAATGCTGACTATCTATCTG
CGCTAGCTCAAGTACAAAATATAGAATCACAAATAGGCTTTAAAGAGGTTAGAGCACCTTTTGATGGTAAGATTGGTATT
AGAAATATTAGTTTGGGACAATATTTCAACAATGGTGATAATGCTGCAACACTTACTACAATTGATCCCATTTTCATTAC
ATTCCCTGTACCTCAAAATAAAGTAAGTATGATAAGCGTTGGTCAAGAAATAAACTTCTACTCCGACTCATATCCTGGTG
AAACTTTTACTGGAAAAATAACAGCTATTAACTCATTTATTAATAACTCCAATAGATCAATTACTGTTCAAGCAACATAT
GCAAATCCTCATCATAAGATTGTTGCAGGAATGTTTTTAACAGTTCATGTTAGTTTACCAGTTAGAAAGAACTCTATTGT
AATACCTCGTAATGCTATTTCATATAGTCTTTACGGTCAATCAGTATTTACTCTAGAACCGGTAATGAAAGATGGTCAAC
CTGTAAAAGCATCTTATACATCTACTGCTGATGGTGGCATGAAAACCATCAACACAGATAAAACACTATACAAAGTAAGT
CAAGCAAATATCGAAGTGCTTGAAACAAGAAATAATCTAGCTTTAGTCACAGGTTTAGAACCAGGAACAACAATTATTAC
ATCTGGCCAAAATAAAGTCCATAAAGGTATGAATGCTATCATAAACAATAGTGTAGAAATTGACAACAACATATACAAGC
AAGGAATTCAGTAA

Upstream 100 bases:

>100_bases
TAGTTTAACTGTATATAGTTTTATATTTTTTATATCATTATTGATCATAAATTGTATAAACTTTTTAGTTAGAATTTTAA
AAAAATAGTGGGACAAAACT

Downstream 100 bases:

>100_bases
TGCGTCTTATTGATCTTTTTATCAGAAGGCCAGTATTATCCCTTTCAATAAGCTTTATGATTATTGTCGTTGGGGTTGGT
TCATTTTTTAAACTTCAGGT

Product: RND efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MDVKKTFLNIKQKINSSKRNYAIFVIATIILAWLVLGKLGISLAIVYFIFQINYIKNKLHKLKDKKTASIAIVVATLILF
GGIFGFAEFIQSMIKKGMAAYVPQPVAVTSSVVEKTDWKQVINTIGEAQAVQSTAISSQSGGIVSEIHFKSGQEVKKGDL
LFKLDTSQLKANLEEALSNLKLAKITKDRYNKLVEQKATSKESADKANADYLSALAQVQNIESQIGFKEVRAPFDGKIGI
RNISLGQYFNNGDNAATLTTIDPIFITFPVPQNKVSMISVGQEINFYSDSYPGETFTGKITAINSFINNSNRSITVQATY
ANPHHKIVAGMFLTVHVSLPVRKNSIVIPRNAISYSLYGQSVFTLEPVMKDGQPVKASYTSTADGGMKTINTDKTLYKVS
QANIEVLETRNNLALVTGLEPGTTIITSGQNKVHKGMNAIINNSVEIDNNIYKQGIQ

Sequences:

>Translated_457_residues
MDVKKTFLNIKQKINSSKRNYAIFVIATIILAWLVLGKLGISLAIVYFIFQINYIKNKLHKLKDKKTASIAIVVATLILF
GGIFGFAEFIQSMIKKGMAAYVPQPVAVTSSVVEKTDWKQVINTIGEAQAVQSTAISSQSGGIVSEIHFKSGQEVKKGDL
LFKLDTSQLKANLEEALSNLKLAKITKDRYNKLVEQKATSKESADKANADYLSALAQVQNIESQIGFKEVRAPFDGKIGI
RNISLGQYFNNGDNAATLTTIDPIFITFPVPQNKVSMISVGQEINFYSDSYPGETFTGKITAINSFINNSNRSITVQATY
ANPHHKIVAGMFLTVHVSLPVRKNSIVIPRNAISYSLYGQSVFTLEPVMKDGQPVKASYTSTADGGMKTINTDKTLYKVS
QANIEVLETRNNLALVTGLEPGTTIITSGQNKVHKGMNAIINNSVEIDNNIYKQGIQ
>Mature_457_residues
MDVKKTFLNIKQKINSSKRNYAIFVIATIILAWLVLGKLGISLAIVYFIFQINYIKNKLHKLKDKKTASIAIVVATLILF
GGIFGFAEFIQSMIKKGMAAYVPQPVAVTSSVVEKTDWKQVINTIGEAQAVQSTAISSQSGGIVSEIHFKSGQEVKKGDL
LFKLDTSQLKANLEEALSNLKLAKITKDRYNKLVEQKATSKESADKANADYLSALAQVQNIESQIGFKEVRAPFDGKIGI
RNISLGQYFNNGDNAATLTTIDPIFITFPVPQNKVSMISVGQEINFYSDSYPGETFTGKITAINSFINNSNRSITVQATY
ANPHHKIVAGMFLTVHVSLPVRKNSIVIPRNAISYSLYGQSVFTLEPVMKDGQPVKASYTSTADGGMKTINTDKTLYKVS
QANIEVLETRNNLALVTGLEPGTTIITSGQNKVHKGMNAIINNSVEIDNNIYKQGIQ

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=293, Percent_Identity=22.8668941979522, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1789665, Length=292, Percent_Identity=25.3424657534247, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1786668, Length=373, Percent_Identity=23.8605898123324, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1789929, Length=255, Percent_Identity=25.0980392156863, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI87081796, Length=325, Percent_Identity=23.0769230769231, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 50089; Mature: 50089

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVKKTFLNIKQKINSSKRNYAIFVIATIILAWLVLGKLGISLAIVYFIFQINYIKNKLH
CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLKDKKTASIAIVVATLILFGGIFGFAEFIQSMIKKGMAAYVPQPVAVTSSVVEKTDWKQ
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHH
VINTIGEAQAVQSTAISSQSGGIVSEIHFKSGQEVKKGDLLFKLDTSQLKANLEEALSNL
HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHCC
KLAKITKDRYNKLVEQKATSKESADKANADYLSALAQVQNIESQIGFKEVRAPFDGKIGI
EEHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEE
RNISLGQYFNNGDNAATLTTIDPIFITFPVPQNKVSMISVGQEINFYSDSYPGETFTGKI
EEEECCCCCCCCCCEEEEEEECEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE
TAINSFINNSNRSITVQATYANPHHKIVAGMFLTVHVSLPVRKNSIVIPRNAISYSLYGQ
EEEEHHHCCCCCEEEEEEEECCCCHHHHEEEEEEEEEEECCCCCCEEECCCCEEEEECCC
SVFTLEPVMKDGQPVKASYTSTADGGMKTINTDKTLYKVSQANIEVLETRNNLALVTGLE
EEEEECHHHCCCCCCEEECCCCCCCCCEEECCCHHEEEECCCCEEEEEECCCEEEEEECC
PGTTIITSGQNKVHKGMNAIINNSVEIDNNIYKQGIQ
CCCEEEECCCHHHHHHHHHHHCCCEEECCHHHHCCCC
>Mature Secondary Structure
MDVKKTFLNIKQKINSSKRNYAIFVIATIILAWLVLGKLGISLAIVYFIFQINYIKNKLH
CCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLKDKKTASIAIVVATLILFGGIFGFAEFIQSMIKKGMAAYVPQPVAVTSSVVEKTDWKQ
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHH
VINTIGEAQAVQSTAISSQSGGIVSEIHFKSGQEVKKGDLLFKLDTSQLKANLEEALSNL
HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHCC
KLAKITKDRYNKLVEQKATSKESADKANADYLSALAQVQNIESQIGFKEVRAPFDGKIGI
EEHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEE
RNISLGQYFNNGDNAATLTTIDPIFITFPVPQNKVSMISVGQEINFYSDSYPGETFTGKI
EEEECCCCCCCCCCEEEEEEECEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE
TAINSFINNSNRSITVQATYANPHHKIVAGMFLTVHVSLPVRKNSIVIPRNAISYSLYGQ
EEEEHHHCCCCCEEEEEEEECCCCHHHHEEEEEEEEEEECCCCCCEEECCCCEEEEECCC
SVFTLEPVMKDGQPVKASYTSTADGGMKTINTDKTLYKVSQANIEVLETRNNLALVTGLE
EEEEECHHHCCCCCCEEECCCCCCCCCEEECCCHHEEEECCCCEEEEEECCCEEEEEECC
PGTTIITSGQNKVHKGMNAIINNSVEIDNNIYKQGIQ
CCCEEEECCCHHHHHHHHHHHCCCEEECCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]