| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256916
Identifier: 89256916
GI number: 89256916
Start: 1570208
End: 1570951
Strand: Direct
Name: 89256916
Synonym: FTL_1639
Alternate gene names: NA
Gene position: 1570208-1570951 (Clockwise)
Preceding gene: 89256915
Following gene: 89256917
Centisome position: 82.82
GC content: 25.13
Gene sequence:
>744_bases ATGCAATATAATTATTTTAACTATCCAAATGAAAAACTCCCACCATATGGTTCTGTAGTCTACTTTGCGTACCGTAAGTT AAATACTGATAAACAGCAAATAATTTATTTACTTGATCAGCTTAAATCACAAATAATTTCATGCACTGAACTTTATAATA ATCTTGAAGTAGCTAATGAGAAAATGAATTGGTGGTTAAAGGAAGTAAATAACCTCGCTAATAAAAAAAATATATCTTCC CCACAGCTAAAAAAGTTAGCAGAAATTTTTGATCAAGAAATTCTCTATCAAAAACTAATTGAAGATATTAGCCTTTCTAT TGATAATAGTAGTGCTACAGAAAGAAATTTTAAACAACATTTTTCAAAGAATTTTTTAGGTATTGAAACTCTCAAAGCTT TATATCTAAACGATTTTACAGCAATTGACAATAACAAAATAGAACAAATAAATGCTAATAATGAAATAATTAGGCATATT TTTTGTATACCTAAGCATTTTTATAATCAAATCTCTTTTAATAATAGAATCTCACCAACTATGTCTAGCCAAGATTTCAA AGATATAACTACTCAATGGTTAGGACTTTATAAAAAAACAACTATTAATAAAAAGCTTAAACCATTAGAAAAAATCAATC AGATTCATTATAAAATGATCAAAAAATATATTAGAAATATTGATAGTCCTTTTAAGGAAACTCTAGATTTTTCGCCATTA AATTTACTATTTTATTCGATATGA
Upstream 100 bases:
>100_bases TGGAAATAATAGGTGTGCATTATAACCCTCTTACAAACAGTTTCAAACTTGCCAGTGGCGCTGATGTTAATTATATTATA GCTTTTAGAAAGGTATAAAA
Downstream 100 bases:
>100_bases ACAAATTGTTGTTTTTGGTATTCTTTTTTAGTTTTTTACAACTTGCTGCTACGACAGTATCCAATAATTATGATTTGACT AATCCTCTACCAACGTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MQYNYFNYPNEKLPPYGSVVYFAYRKLNTDKQQIIYLLDQLKSQIISCTELYNNLEVANEKMNWWLKEVNNLANKKNISS PQLKKLAEIFDQEILYQKLIEDISLSIDNSSATERNFKQHFSKNFLGIETLKALYLNDFTAIDNNKIEQINANNEIIRHI FCIPKHFYNQISFNNRISPTMSSQDFKDITTQWLGLYKKTTINKKLKPLEKINQIHYKMIKKYIRNIDSPFKETLDFSPL NLLFYSI
Sequences:
>Translated_247_residues MQYNYFNYPNEKLPPYGSVVYFAYRKLNTDKQQIIYLLDQLKSQIISCTELYNNLEVANEKMNWWLKEVNNLANKKNISS PQLKKLAEIFDQEILYQKLIEDISLSIDNSSATERNFKQHFSKNFLGIETLKALYLNDFTAIDNNKIEQINANNEIIRHI FCIPKHFYNQISFNNRISPTMSSQDFKDITTQWLGLYKKTTINKKLKPLEKINQIHYKMIKKYIRNIDSPFKETLDFSPL NLLFYSI >Mature_247_residues MQYNYFNYPNEKLPPYGSVVYFAYRKLNTDKQQIIYLLDQLKSQIISCTELYNNLEVANEKMNWWLKEVNNLANKKNISS PQLKKLAEIFDQEILYQKLIEDISLSIDNSSATERNFKQHFSKNFLGIETLKALYLNDFTAIDNNKIEQINANNEIIRHI FCIPKHFYNQISFNNRISPTMSSQDFKDITTQWLGLYKKTTINKKLKPLEKINQIHYKMIKKYIRNIDSPFKETLDFSPL NLLFYSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29382; Mature: 29382
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYNYFNYPNEKLPPYGSVVYFAYRKLNTDKQQIIYLLDQLKSQIISCTELYNNLEVANE CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMNWWLKEVNNLANKKNISSPQLKKLAEIFDQEILYQKLIEDISLSIDNSSATERNFKQH HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH FSKNFLGIETLKALYLNDFTAIDNNKIEQINANNEIIRHIFCIPKHFYNQISFNNRISPT HHCCCCHHHHHHHHHHHCHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCC MSSQDFKDITTQWLGLYKKTTINKKLKPLEKINQIHYKMIKKYIRNIDSPFKETLDFSPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHH NLLFYSI HHHHCCC >Mature Secondary Structure MQYNYFNYPNEKLPPYGSVVYFAYRKLNTDKQQIIYLLDQLKSQIISCTELYNNLEVANE CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMNWWLKEVNNLANKKNISSPQLKKLAEIFDQEILYQKLIEDISLSIDNSSATERNFKQH HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH FSKNFLGIETLKALYLNDFTAIDNNKIEQINANNEIIRHIFCIPKHFYNQISFNNRISPT HHCCCCHHHHHHHHHHHCHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCC MSSQDFKDITTQWLGLYKKTTINKKLKPLEKINQIHYKMIKKYIRNIDSPFKETLDFSPL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHH NLLFYSI HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA