| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256908
Identifier: 89256908
GI number: 89256908
Start: 1561074
End: 1562108
Strand: Reverse
Name: 89256908
Synonym: FTL_1631
Alternate gene names: NA
Gene position: 1562108-1561074 (Counterclockwise)
Preceding gene: 89256909
Following gene: 89256903
Centisome position: 82.39
GC content: 29.28
Gene sequence:
>1035_bases ATGATAGAAGCTATCAATAATCTTAATAGCTTAGATGATATTACTAAGAATAAGTTTGCATATAAGATATCGCAAATAGA TAGTGAATTTGATGTGAATAATTACGATAGTGAAGCTAAAATGTATAATCCAGCTGGAAAAGTTTGTGATGGCTCTATCT CTACTTTATATATCCAAGCAATAGAAAGAGATAATAAATTTCTAGACTATATGGCGAGTGTCTACTATCTAACTATAGCT GATAATATTGTTACACAATATCCTAGTTCAAATATAAATCCTTCAGCAGTAGATACTAGTTTGCCTATACAGGATCAGCG TATCAGAATGGCTGCATATAATATGATATCTGCATATTATGATCAAAAGCAAAAGATAATTAATATCGCCGATAGTACTT TAAATAACTGCCAATATTTTGGCGATTTTAATGCTCCAAGAATCCCAGGTATAAGTTACCAGACTCAAATAAGTAGTCAC GATTATTATGATTTATACTTGGTTTTAGATTTACAGGATGATGGTGGTAGCTCAGATATACCAGCAGCTGAGATTTTCAA CAATAAAAATCTAAGACGGCAATATTTTAGCGAAATACAAAATAAGTTTTTAGATACGATTTTTGATAATTCATTAGATA GTGTTATTGCTATCAAGTATTTAGATGGTAACGTTAATCAAATCGGCGTCAAATTAAAGTTAAAAAAAGATACTTTAGTT AATGCTAAAGAACTAATTAGTTCTGTGTCTAAGCAGAATGCATATATTTCTTATGTTTCTGAAGGTATATCATTGTTGTT TGTACACTATCCTAATTTCACAGGTATTGCACCTGACAATGTTATCACACAAAAAATACAGCAACAGCTTAGTGATCCAA ATAATTACTATATAAGAATAGCTGAAACTACTTTCAAGGAACCTACAGATATTTATATAGAGAACCATATATTGATATAC GATACTAACAGTTTTAACTATATGAATTATTTGATGACAAATATAGGCCAAGATATAAGAAATATTTATATATAG
Upstream 100 bases:
>100_bases TATAGAGGATGGTATTGATGCTGCTTTAGATAGTTTTTATGAGCAACAAATAAAAAATCAAGGTGGATATATTGAACTAT AGTCATCACAATTAGCGGTA
Downstream 100 bases:
>100_bases TTAATCCGAAAGATATTTGTAGAAAAAGATATTTGTAGAAATGTTATAATGTCTAATAAAAATGCCATCATATAGCCAAG ATTTTAGAGACATCGTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MIEAINNLNSLDDITKNKFAYKISQIDSEFDVNNYDSEAKMYNPAGKVCDGSISTLYIQAIERDNKFLDYMASVYYLTIA DNIVTQYPSSNINPSAVDTSLPIQDQRIRMAAYNMISAYYDQKQKIINIADSTLNNCQYFGDFNAPRIPGISYQTQISSH DYYDLYLVLDLQDDGGSSDIPAAEIFNNKNLRRQYFSEIQNKFLDTIFDNSLDSVIAIKYLDGNVNQIGVKLKLKKDTLV NAKELISSVSKQNAYISYVSEGISLLFVHYPNFTGIAPDNVITQKIQQQLSDPNNYYIRIAETTFKEPTDIYIENHILIY DTNSFNYMNYLMTNIGQDIRNIYI
Sequences:
>Translated_344_residues MIEAINNLNSLDDITKNKFAYKISQIDSEFDVNNYDSEAKMYNPAGKVCDGSISTLYIQAIERDNKFLDYMASVYYLTIA DNIVTQYPSSNINPSAVDTSLPIQDQRIRMAAYNMISAYYDQKQKIINIADSTLNNCQYFGDFNAPRIPGISYQTQISSH DYYDLYLVLDLQDDGGSSDIPAAEIFNNKNLRRQYFSEIQNKFLDTIFDNSLDSVIAIKYLDGNVNQIGVKLKLKKDTLV NAKELISSVSKQNAYISYVSEGISLLFVHYPNFTGIAPDNVITQKIQQQLSDPNNYYIRIAETTFKEPTDIYIENHILIY DTNSFNYMNYLMTNIGQDIRNIYI >Mature_344_residues MIEAINNLNSLDDITKNKFAYKISQIDSEFDVNNYDSEAKMYNPAGKVCDGSISTLYIQAIERDNKFLDYMASVYYLTIA DNIVTQYPSSNINPSAVDTSLPIQDQRIRMAAYNMISAYYDQKQKIINIADSTLNNCQYFGDFNAPRIPGISYQTQISSH DYYDLYLVLDLQDDGGSSDIPAAEIFNNKNLRRQYFSEIQNKFLDTIFDNSLDSVIAIKYLDGNVNQIGVKLKLKKDTLV NAKELISSVSKQNAYISYVSEGISLLFVHYPNFTGIAPDNVITQKIQQQLSDPNNYYIRIAETTFKEPTDIYIENHILIY DTNSFNYMNYLMTNIGQDIRNIYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39381; Mature: 39381
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEAINNLNSLDDITKNKFAYKISQIDSEFDVNNYDSEAKMYNPAGKVCDGSISTLYIQA CCCCHHCCHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEE IERDNKFLDYMASVYYLTIADNIVTQYPSSNINPSAVDTSLPIQDQRIRMAAYNMISAYY HHCCCHHHHHHHHHHEEEEEHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DQKQKIINIADSTLNNCQYFGDFNAPRIPGISYQTQISSHDYYDLYLVLDLQDDGGSSDI HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCC PAAEIFNNKNLRRQYFSEIQNKFLDTIFDNSLDSVIAIKYLDGNVNQIGVKLKLKKDTLV CHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEEECCCHHC NAKELISSVSKQNAYISYVSEGISLLFVHYPNFTGIAPDNVITQKIQQQLSDPNNYYIRI CHHHHHHHHHHCCHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE AETTFKEPTDIYIENHILIYDTNSFNYMNYLMTNIGQDIRNIYI EECCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIEAINNLNSLDDITKNKFAYKISQIDSEFDVNNYDSEAKMYNPAGKVCDGSISTLYIQA CCCCHHCCHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEE IERDNKFLDYMASVYYLTIADNIVTQYPSSNINPSAVDTSLPIQDQRIRMAAYNMISAYY HHCCCHHHHHHHHHHEEEEEHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DQKQKIINIADSTLNNCQYFGDFNAPRIPGISYQTQISSHDYYDLYLVLDLQDDGGSSDI HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCC PAAEIFNNKNLRRQYFSEIQNKFLDTIFDNSLDSVIAIKYLDGNVNQIGVKLKLKKDTLV CHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEEECCCHHC NAKELISSVSKQNAYISYVSEGISLLFVHYPNFTGIAPDNVITQKIQQQLSDPNNYYIRI CHHHHHHHHHHCCHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE AETTFKEPTDIYIENHILIYDTNSFNYMNYLMTNIGQDIRNIYI EECCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA