| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256902
Identifier: 89256902
GI number: 89256902
Start: 1555811
End: 1556455
Strand: Direct
Name: 89256902
Synonym: FTL_1625
Alternate gene names: NA
Gene position: 1555811-1556455 (Clockwise)
Preceding gene: 89256901
Following gene: 89256904
Centisome position: 82.06
GC content: 26.2
Gene sequence:
>645_bases ATGACAAAACAAGAACTAAGAAACTACTATCAGCTAGCTTTTATTAATGGAGTCAATGATGCGATTTCAGTAATTTTATT ATACAAAGTATTCGTTGTATTAATGACAGGTAACATTAGATATAGTATTGCTGATATTATTACAAACCCTCAATTTTCTG ATTTTGTGCGAATAACTCTTCTATTTAACTTTATTATTTCTGGGGTTATTGTACATGGCTTTATAGCAAAAAGGACTATT AAATTTCGTATTGCCATATCTTCATTATTTGTTCTTATATATTGTTTTAGTGGTACTTTTGTACTACATATCAATGCTCT ACATGATAATAGTTTTGGTTTTCTTATCCTTGCTAATATTGCTACTATCATGAGTGTAATAATGAATAATATATTTTATA GATTTCATTCTACAAAAATAAATTTAGTTGCTTATACCATGAATCTTATAAATCTTTCACATATGATTGCAGAGAAGAGA TATCATGATATAACAATATTAAGTACTACAATCTTAAGTTTTATTATCGGCTTAATTGTTGGGGCATACTTAACTTCTAT GATTTATTTTTTTGCAATTTTAATCGTAGTCCCGGTTTTAATTAATTTGTATATCACAAATCACAAAATAAATATTCAGC GATAA
Upstream 100 bases:
>100_bases AATTGACTATTATCTTAATCACAATAATACTTTTGTGTATTACTAAATACTATAAAAAAGCTAAGTCTTAACCATAACAA CTGTAAGCGAAAGGTTTAAA
Downstream 100 bases:
>100_bases GCCTTTAATCATCAACTAAATAGTATTTGTCCTTTGCCTTACTGTTTCATATAATGCTATACCTGTAGCAACAGAAACAT TTAAGCTAGAAACTTCACCT
Product: NADH dehydrogenase subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTKQELRNYYQLAFINGVNDAISVILLYKVFVVLMTGNIRYSIADIITNPQFSDFVRITLLFNFIISGVIVHGFIAKRTI KFRIAISSLFVLIYCFSGTFVLHINALHDNSFGFLILANIATIMSVIMNNIFYRFHSTKINLVAYTMNLINLSHMIAEKR YHDITILSTTILSFIIGLIVGAYLTSMIYFFAILIVVPVLINLYITNHKINIQR
Sequences:
>Translated_214_residues MTKQELRNYYQLAFINGVNDAISVILLYKVFVVLMTGNIRYSIADIITNPQFSDFVRITLLFNFIISGVIVHGFIAKRTI KFRIAISSLFVLIYCFSGTFVLHINALHDNSFGFLILANIATIMSVIMNNIFYRFHSTKINLVAYTMNLINLSHMIAEKR YHDITILSTTILSFIIGLIVGAYLTSMIYFFAILIVVPVLINLYITNHKINIQR >Mature_213_residues TKQELRNYYQLAFINGVNDAISVILLYKVFVVLMTGNIRYSIADIITNPQFSDFVRITLLFNFIISGVIVHGFIAKRTIK FRIAISSLFVLIYCFSGTFVLHINALHDNSFGFLILANIATIMSVIMNNIFYRFHSTKINLVAYTMNLINLSHMIAEKRY HDITILSTTILSFIIGLIVGAYLTSMIYFFAILIVVPVLINLYITNHKINIQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24504; Mature: 24373
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQELRNYYQLAFINGVNDAISVILLYKVFVVLMTGNIRYSIADIITNPQFSDFVRITL CCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHH LFNFIISGVIVHGFIAKRTIKFRIAISSLFVLIYCFSGTFVLHINALHDNSFGFLILANI HHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHH ATIMSVIMNNIFYRFHSTKINLVAYTMNLINLSHMIAEKRYHDITILSTTILSFIIGLIV HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GAYLTSMIYFFAILIVVPVLINLYITNHKINIQR HHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECC >Mature Secondary Structure TKQELRNYYQLAFINGVNDAISVILLYKVFVVLMTGNIRYSIADIITNPQFSDFVRITL CHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHH LFNFIISGVIVHGFIAKRTIKFRIAISSLFVLIYCFSGTFVLHINALHDNSFGFLILANI HHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHH ATIMSVIMNNIFYRFHSTKINLVAYTMNLINLSHMIAEKRYHDITILSTTILSFIIGLIV HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GAYLTSMIYFFAILIVVPVLINLYITNHKINIQR HHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA