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The map label for this gene is sspA [H]

Identifier: 89256883

GI number: 89256883

Start: 1534658

End: 1535287

Strand: Reverse

Name: sspA [H]

Synonym: FTL_1606

Alternate gene names: 89256883

Gene position: 1535287-1534658 (Counterclockwise)

Preceding gene: 89256888

Following gene: 89256882

Centisome position: 80.98

GC content: 33.33

Gene sequence:

>630_bases
ATGAAAGTTACATTATATACAACGAAGTATTGTCCATATTCTCTTAGAGCAAGAATTGCTTTAGCAGAAAAGAAAATGTC
AACAAATATCGTAGAGGCTGGCGACTTAGAACCAGCCATGATCAAGAAAATAGCTCCTAATGGTGTTTTCCCTATTTTGA
TGGAGAAAGACTATAGCATCAATAATAGAAAAGCATTGCTAATTTATATTGATGAAAGATTTCCTGCTCCAAGCTTGCTA
CCAAATGTAGTTAATGAGCGCATAAAGATACGCTTATCGCTTGATAAAATTGATAATGAGTGGTATCCAGTATTAGATCA
AATTCGCAAACACAGATCAGATCAGAAGATGCTTGAATCAATGTTTAAAGACCTAAAAGAAAGTTTATTGGCAATGGAAA
AAGCTTTTACTGGCTCAGAGTTTTTTATATCTTCTGGCTTTACTTTAGCAGATTGTTATATAGCTGCTTTGATTATATGT
TTAGAAGCAGAAGGATTTATTATTGATGATGAATATGGGGCAATTTATGAGTATAAAAAAAGACTCTTTGCTAGAGATTC
AGTCAAAAAAGCTAACATAAAAGGCGGCGCTGGTGAGTCATTACTCAAAACTCTAAGAACTCATAGATAA

Upstream 100 bases:

>100_bases
GTAGTTATCCACAAATATGGTAAAATTTAATATTAATTCTTATTATTTACAATTATAGCAAACTAAAATAATTGTTTTAA
TCTATAAAAAGGCATATTTG

Downstream 100 bases:

>100_bases
GGTTGTAAAATATGTGGTATCAAAGTTTTATAGGTTTTGTATTTTTTGCTCTGAGTACTGTATTAGTTGTTGCTGCTATT
GTGATTGTGATTGGGAGCTT

Product: stringent starvation protein A, regulator of transcription

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKVTLYTTKYCPYSLRARIALAEKKMSTNIVEAGDLEPAMIKKIAPNGVFPILMEKDYSINNRKALLIYIDERFPAPSLL
PNVVNERIKIRLSLDKIDNEWYPVLDQIRKHRSDQKMLESMFKDLKESLLAMEKAFTGSEFFISSGFTLADCYIAALIIC
LEAEGFIIDDEYGAIYEYKKRLFARDSVKKANIKGGAGESLLKTLRTHR

Sequences:

>Translated_209_residues
MKVTLYTTKYCPYSLRARIALAEKKMSTNIVEAGDLEPAMIKKIAPNGVFPILMEKDYSINNRKALLIYIDERFPAPSLL
PNVVNERIKIRLSLDKIDNEWYPVLDQIRKHRSDQKMLESMFKDLKESLLAMEKAFTGSEFFISSGFTLADCYIAALIIC
LEAEGFIIDDEYGAIYEYKKRLFARDSVKKANIKGGAGESLLKTLRTHR
>Mature_209_residues
MKVTLYTTKYCPYSLRARIALAEKKMSTNIVEAGDLEPAMIKKIAPNGVFPILMEKDYSINNRKALLIYIDERFPAPSLL
PNVVNERIKIRLSLDKIDNEWYPVLDQIRKHRSDQKMLESMFKDLKESLLAMEKAFTGSEFFISSGFTLADCYIAALIIC
LEAEGFIIDDEYGAIYEYKKRLFARDSVKKANIKGGAGESLLKTLRTHR

Specific function: Forms an equimolar complex with the RNA polymerase holoenzyme (RNAP) but not with the core enzyme [H]

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789624, Length=188, Percent_Identity=31.9148936170213, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 23915; Mature: 23915

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTLYTTKYCPYSLRARIALAEKKMSTNIVEAGDLEPAMIKKIAPNGVFPILMEKDYSI
CEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCC
NNRKALLIYIDERFPAPSLLPNVVNERIKIRLSLDKIDNEWYPVLDQIRKHRSDQKMLES
CCCEEEEEEEECCCCCCHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHH
MFKDLKESLLAMEKAFTGSEFFISSGFTLADCYIAALIICLEAEGFIIDDEYGAIYEYKK
HHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
RLFARDSVKKANIKGGAGESLLKTLRTHR
HHHHHCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKVTLYTTKYCPYSLRARIALAEKKMSTNIVEAGDLEPAMIKKIAPNGVFPILMEKDYSI
CEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCC
NNRKALLIYIDERFPAPSLLPNVVNERIKIRLSLDKIDNEWYPVLDQIRKHRSDQKMLES
CCCEEEEEEEECCCCCCHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHH
MFKDLKESLLAMEKAFTGSEFFISSGFTLADCYIAALIICLEAEGFIIDDEYGAIYEYKK
HHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
RLFARDSVKKANIKGGAGESLLKTLRTHR
HHHHHCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1729207 [H]