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The map label for this gene is recJ [H]

Identifier: 89256862

GI number: 89256862

Start: 1512857

End: 1514599

Strand: Direct

Name: recJ [H]

Synonym: FTL_1585

Alternate gene names: 89256862

Gene position: 1512857-1514599 (Clockwise)

Preceding gene: 89256861

Following gene: 89256863

Centisome position: 79.79

GC content: 32.99

Gene sequence:

>1743_bases
ATGCTAATCAAACAAAAAAAAATTGATAATAATATCTTTAGTACTCTACTAGCTAAAGGCTATGATTCTTTTACAGCAAA
AATAATCTCTGCTAGAGTACGTAAAATAGAAAACCTTGAGCTGATTTTAAATGGTTCAATCAAGGATCTATCATCACCAT
TTTTATTCAAAGATATTGAAAAAGCTGTAGAAAGACTTTATCAAGCAGTACAAAATAATGAAATTATTGGATTAGAAACT
GATCATGACTGTGACGGTCAGACTTCACACGCGATTTTGTATGAAGCTTTAACTAAAATATTTGGTCACCCTAAAGAAAA
AATCCGCTCATATATTGGCCATAGACTGCAAGAAGGCTATGGTTTATCAGAGTCCCTAATGAATAGAATTCTTACAGATA
AAATAAGGCCAAGCCTAATAATAACAGCTGATAATGGTTCTACAGACGAGCCGAGGATTGCAATCCTTAAAAAAAATGGT
ATTGATACAATTATAACTGATCATCATGCTATCCCACCTGAAGGCACTCCTAAAAGTGCTATTGCCGTACTTAATCCAAC
TCAACAAGGCTGTAACTATCCAGATAAAGCTATCGCTGGCTGTATGGTTGCTTGGCTTTTTATGGCAGCACTGCGCAGAA
AGTATCTGCAAAACAACAAAATGATATCGCAATCATATGGTTTAAGCAATCTGTTAGATTTTGTCGCTATTGGCACAGTT
GCTGATTGCGTAAGTATGGCAACTAGTCATAATAATCGTATTGTGACAAAATTTGGTATCGAGCAATTAAAAAATAATCA
ACGCTTATGCTGGGACTTTGTAGATAAAGATAAACTGTCAAGTGAATACATTGGTTTTAGTATTGCGCCAATTCTAAATA
GTGATGGTAGAGTTTCTGATGCTTTAGGTTCTGTTAGCTTTTTACTAGAAGAAGATGAGCACAAGATAGAAGATATCTTT
GATAATCTCAAACAACAAAACAACCAGCGTAAAGAAATCCAAAAAAAACTTACTCAAGAAGCTATAGTTCAAGCGTATCA
GCTAAATCAGCAAAAAAACTCATTATGTATCCTTTTAGAGGATGGTCATTCTGGAATTCATGGGATATCAGCAAGTAGAA
TTAAGGAAATGTTTGGCAAAGCAGTAATTATCTTCTCGCAAACGCAGCATGATTCAACTCTAATATCTGGATCCGCACGA
AGCATAGACAATATTCATATCAAAACTATCCTAGATAATATAGCTGTTAAAGAACCACAACTAATCATCAAATATGGTGG
CCATAAAGGTGCCGCAGGTTTAACGATAAAAAAATCTGATTTTGATAAATTCTATCAATTATTTGAAAGTGAAATAACTG
ACATTATCACTAAACAAAATATAATTCTCGAGCCTATAATAGAATATGATTTTGAGCTTGATGAGCATCACTTTGAATTA
GAGACGTTAGATAAAATAGATGCTCTAGAACCCTTTGGTAGAGAATTTGAAAAACCTTTATTTTGTAATCAATTTATGCT
TGAAAATTTACGCTTAGTTGGTAAAGATAAAAATCATGCTCAGCTAGTATTACGCTATAAAAATATATCCTCAATCAAAG
CAATATGGTTTAACGCTACGGATAATAAAATACTAGAACAGCTAATTATCGGCGACTGTATAAAAGCCTGCTATGAGTTA
CAAAAAGAAGAATTCTTAGGACAAATAAACCTATCACTTAATATTAAAACTATCGAAAAATGA

Upstream 100 bases:

>100_bases
GAATATTCTTTGCAATACCACTAGGTCTACTATTTATCTCCGGCGTAAATATGTTTAGAAATCATCTCAATGGTAAAAAA
ACTCAAGCTGATATAAATCT

Downstream 100 bases:

>100_bases
AAAATCACCGCCTCATAATAACACAACTTAACAAATATATAGATGATATAAAAGTTGAATATTTTCCAACTATAGACTCA
ACAAATGACTATTTCTTAGC

Product: single-stranded-DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MLIKQKKIDNNIFSTLLAKGYDSFTAKIISARVRKIENLELILNGSIKDLSSPFLFKDIEKAVERLYQAVQNNEIIGLET
DHDCDGQTSHAILYEALTKIFGHPKEKIRSYIGHRLQEGYGLSESLMNRILTDKIRPSLIITADNGSTDEPRIAILKKNG
IDTIITDHHAIPPEGTPKSAIAVLNPTQQGCNYPDKAIAGCMVAWLFMAALRRKYLQNNKMISQSYGLSNLLDFVAIGTV
ADCVSMATSHNNRIVTKFGIEQLKNNQRLCWDFVDKDKLSSEYIGFSIAPILNSDGRVSDALGSVSFLLEEDEHKIEDIF
DNLKQQNNQRKEIQKKLTQEAIVQAYQLNQQKNSLCILLEDGHSGIHGISASRIKEMFGKAVIIFSQTQHDSTLISGSAR
SIDNIHIKTILDNIAVKEPQLIIKYGGHKGAAGLTIKKSDFDKFYQLFESEITDIITKQNIILEPIIEYDFELDEHHFEL
ETLDKIDALEPFGREFEKPLFCNQFMLENLRLVGKDKNHAQLVLRYKNISSIKAIWFNATDNKILEQLIIGDCIKACYEL
QKEEFLGQINLSLNIKTIEK

Sequences:

>Translated_580_residues
MLIKQKKIDNNIFSTLLAKGYDSFTAKIISARVRKIENLELILNGSIKDLSSPFLFKDIEKAVERLYQAVQNNEIIGLET
DHDCDGQTSHAILYEALTKIFGHPKEKIRSYIGHRLQEGYGLSESLMNRILTDKIRPSLIITADNGSTDEPRIAILKKNG
IDTIITDHHAIPPEGTPKSAIAVLNPTQQGCNYPDKAIAGCMVAWLFMAALRRKYLQNNKMISQSYGLSNLLDFVAIGTV
ADCVSMATSHNNRIVTKFGIEQLKNNQRLCWDFVDKDKLSSEYIGFSIAPILNSDGRVSDALGSVSFLLEEDEHKIEDIF
DNLKQQNNQRKEIQKKLTQEAIVQAYQLNQQKNSLCILLEDGHSGIHGISASRIKEMFGKAVIIFSQTQHDSTLISGSAR
SIDNIHIKTILDNIAVKEPQLIIKYGGHKGAAGLTIKKSDFDKFYQLFESEITDIITKQNIILEPIIEYDFELDEHHFEL
ETLDKIDALEPFGREFEKPLFCNQFMLENLRLVGKDKNHAQLVLRYKNISSIKAIWFNATDNKILEQLIIGDCIKACYEL
QKEEFLGQINLSLNIKTIEK
>Mature_580_residues
MLIKQKKIDNNIFSTLLAKGYDSFTAKIISARVRKIENLELILNGSIKDLSSPFLFKDIEKAVERLYQAVQNNEIIGLET
DHDCDGQTSHAILYEALTKIFGHPKEKIRSYIGHRLQEGYGLSESLMNRILTDKIRPSLIITADNGSTDEPRIAILKKNG
IDTIITDHHAIPPEGTPKSAIAVLNPTQQGCNYPDKAIAGCMVAWLFMAALRRKYLQNNKMISQSYGLSNLLDFVAIGTV
ADCVSMATSHNNRIVTKFGIEQLKNNQRLCWDFVDKDKLSSEYIGFSIAPILNSDGRVSDALGSVSFLLEEDEHKIEDIF
DNLKQQNNQRKEIQKKLTQEAIVQAYQLNQQKNSLCILLEDGHSGIHGISASRIKEMFGKAVIIFSQTQHDSTLISGSAR
SIDNIHIKTILDNIAVKEPQLIIKYGGHKGAAGLTIKKSDFDKFYQLFESEITDIITKQNIILEPIIEYDFELDEHHFEL
ETLDKIDALEPFGREFEKPLFCNQFMLENLRLVGKDKNHAQLVLRYKNISSIKAIWFNATDNKILEQLIIGDCIKACYEL
QKEEFLGQINLSLNIKTIEK

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=569, Percent_Identity=30.5799648506151, Blast_Score=225, Evalue=5e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 65619; Mature: 65619

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKQKKIDNNIFSTLLAKGYDSFTAKIISARVRKIENLELILNGSIKDLSSPFLFKDIE
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHCCCCHHHHHHH
KAVERLYQAVQNNEIIGLETDHDCDGQTSHAILYEALTKIFGHPKEKIRSYIGHRLQEGY
HHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
GLSESLMNRILTDKIRPSLIITADNGSTDEPRIAILKKNGIDTIITDHHAIPPEGTPKSA
CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCE
IAVLNPTQQGCNYPDKAIAGCMVAWLFMAALRRKYLQNNKMISQSYGLSNLLDFVAIGTV
EEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCHHHHHHHHHHHHH
ADCVSMATSHNNRIVTKFGIEQLKNNQRLCWDFVDKDKLSSEYIGFSIAPILNSDGRVSD
HHHHHHHHCCCCEEEEHHCHHHHCCCCCEEEEHHCHHHCCCHHCCEEEEECCCCCCCHHH
ALGSVSFLLEEDEHKIEDIFDNLKQQNNQRKEIQKKLTQEAIVQAYQLNQQKNSLCILLE
HHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DGHSGIHGISASRIKEMFGKAVIIFSQTQHDSTLISGSARSIDNIHIKTILDNIAVKEPQ
CCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCE
LIIKYGGHKGAAGLTIKKSDFDKFYQLFESEITDIITKQNIILEPIIEYDFELDEHHFEL
EEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHH
ETLDKIDALEPFGREFEKPLFCNQFMLENLRLVGKDKNHAQLVLRYKNISSIKAIWFNAT
HHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCC
DNKILEQLIIGDCIKACYELQKEEFLGQINLSLNIKTIEK
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECC
>Mature Secondary Structure
MLIKQKKIDNNIFSTLLAKGYDSFTAKIISARVRKIENLELILNGSIKDLSSPFLFKDIE
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHCCCCHHHHHHH
KAVERLYQAVQNNEIIGLETDHDCDGQTSHAILYEALTKIFGHPKEKIRSYIGHRLQEGY
HHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
GLSESLMNRILTDKIRPSLIITADNGSTDEPRIAILKKNGIDTIITDHHAIPPEGTPKSA
CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCE
IAVLNPTQQGCNYPDKAIAGCMVAWLFMAALRRKYLQNNKMISQSYGLSNLLDFVAIGTV
EEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCHHHHHHHHHHHHH
ADCVSMATSHNNRIVTKFGIEQLKNNQRLCWDFVDKDKLSSEYIGFSIAPILNSDGRVSD
HHHHHHHHCCCCEEEEHHCHHHHCCCCCEEEEHHCHHHCCCHHCCEEEEECCCCCCCHHH
ALGSVSFLLEEDEHKIEDIFDNLKQQNNQRKEIQKKLTQEAIVQAYQLNQQKNSLCILLE
HHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DGHSGIHGISASRIKEMFGKAVIIFSQTQHDSTLISGSARSIDNIHIKTILDNIAVKEPQ
CCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCE
LIIKYGGHKGAAGLTIKKSDFDKFYQLFESEITDIITKQNIILEPIIEYDFELDEHHFEL
EEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHH
ETLDKIDALEPFGREFEKPLFCNQFMLENLRLVGKDKNHAQLVLRYKNISSIKAIWFNAT
HHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCC
DNKILEQLIIGDCIKACYELQKEEFLGQINLSLNIKTIEK
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]