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The map label for this gene is ybhR [H]

Identifier: 89256802

GI number: 89256802

Start: 1445743

End: 1446297

Strand: Direct

Name: ybhR [H]

Synonym: FTL_1515

Alternate gene names: 89256802

Gene position: 1445743-1446297 (Clockwise)

Preceding gene: 89256801

Following gene: 89256803

Centisome position: 76.25

GC content: 30.27

Gene sequence:

>555_bases
TTGACTATGACTATGGTTATGGTTACATCTTTGACAATCACGCGCGAGAAAGAGTATGGAACTATGGAGTCTCTTCTTGC
AACACCTGTAACATCTCTTGAGATTATTTTCGGTAAGATTACTCCATATATTGTTGTTGGCTATATTCAGTTATTATTGA
TTATTATATTTGCTAAGGTGATATTTGGAATAACCATAGTTGGTAGTATTTTATTATTACTTATTGCGACTTTTCCTTTT
ATTATTGCAAATCTCTTGGTAGGTATTACATTCTCAACTATTGCTGATACACAATTACAAGCAATGCAAATGACATTTTT
CTTTTTCTTGCCATCAATATTACTGTCAGGTTTTATGTTTCCATTTGATGGTATGCCAGAGTGGGCACAAGTCATAGATA
ATATTTCACCATTAACTCATTATCTAAATATTGTCCGAGAAATTCTTCTTAAAGGAGGAGGGTTTTTTGATATTCTAAAC
AGCATTTATCCACTTTTAATTTTTATGATAGTAGTTTCTTTCATATTTATAAAAAAATACAAGAATACTATTTAG

Upstream 100 bases:

>100_bases
AATACCTCAGCCACAGTCTTTCAATTTTGTAATCCATAATAAATATAATCCAGAGAATAAAACACAAAATAATATCGTAC
CAACATTAGCAGGAGTGATT

Downstream 100 bases:

>100_bases
ATTAGGTTCTGTGCACAAAAAACTTAAATTATATTGAAAATAGCTAAACTGCTGTTATTTAAGATTTGAAAAGCAATAAA
TATCAATGGTTTAGCAAATG

Product: ABC transporter, membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MTMTMVMVTSLTITREKEYGTMESLLATPVTSLEIIFGKITPYIVVGYIQLLLIIIFAKVIFGITIVGSILLLLIATFPF
IIANLLVGITFSTIADTQLQAMQMTFFFFLPSILLSGFMFPFDGMPEWAQVIDNISPLTHYLNIVREILLKGGGFFDILN
SIYPLLIFMIVVSFIFIKKYKNTI

Sequences:

>Translated_184_residues
MTMTMVMVTSLTITREKEYGTMESLLATPVTSLEIIFGKITPYIVVGYIQLLLIIIFAKVIFGITIVGSILLLLIATFPF
IIANLLVGITFSTIADTQLQAMQMTFFFFLPSILLSGFMFPFDGMPEWAQVIDNISPLTHYLNIVREILLKGGGFFDILN
SIYPLLIFMIVVSFIFIKKYKNTI
>Mature_183_residues
TMTMVMVTSLTITREKEYGTMESLLATPVTSLEIIFGKITPYIVVGYIQLLLIIIFAKVIFGITIVGSILLLLIATFPFI
IANLLVGITFSTIADTQLQAMQMTFFFFLPSILLSGFMFPFDGMPEWAQVIDNISPLTHYLNIVREILLKGGGFFDILNS
IYPLLIFMIVVSFIFIKKYKNTI

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=166, Percent_Identity=33.1325301204819, Blast_Score=106, Evalue=8e-25,
Organism=Escherichia coli, GI1787011, Length=154, Percent_Identity=35.7142857142857, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI48994943, Length=183, Percent_Identity=30.0546448087432, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI226510979, Length=155, Percent_Identity=33.5483870967742, Blast_Score=75, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24650855, Length=147, Percent_Identity=29.2517006802721, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24650853, Length=147, Percent_Identity=29.2517006802721, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 20730; Mature: 20598

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTMVMVTSLTITREKEYGTMESLLATPVTSLEIIFGKITPYIVVGYIQLLLIIIFAKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFGITIVGSILLLLIATFPFIIANLLVGITFSTIADTQLQAMQMTFFFFLPSILLSGFMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PFDGMPEWAQVIDNISPLTHYLNIVREILLKGGGFFDILNSIYPLLIFMIVVSFIFIKKY
CCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KNTI
HCCC
>Mature Secondary Structure 
TMTMVMVTSLTITREKEYGTMESLLATPVTSLEIIFGKITPYIVVGYIQLLLIIIFAKV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFGITIVGSILLLLIATFPFIIANLLVGITFSTIADTQLQAMQMTFFFFLPSILLSGFMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PFDGMPEWAQVIDNISPLTHYLNIVREILLKGGGFFDILNSIYPLLIFMIVVSFIFIKKY
CCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KNTI
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]