| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256799
Identifier: 89256799
GI number: 89256799
Start: 1443453
End: 1444256
Strand: Direct
Name: 89256799
Synonym: FTL_1512
Alternate gene names: NA
Gene position: 1443453-1444256 (Clockwise)
Preceding gene: 89256793
Following gene: 89256800
Centisome position: 76.13
GC content: 30.97
Gene sequence:
>804_bases GTGAGTCAAGGAGAGTCTGTTAAAGAAGGTCAGTATTTATTTTTAATTGATTCATCAAAAAATCAGATTTTATTAGATTC AAATAAATTTTTGTATAGTGCATCTCAGGCGGTCTCAGAAAATATGTCTAAAGGTAAAAGACAACCATATATAGAAAAGA CCGCTATTGATATATCTAATGCCAAGGCAAATTTAGCAGTTGCATCTAAAGAATATCAGCGTCAACAACTATTATTTAAA GATGACAGTACTTCTCAAAAAGAGTTTGAACAGGAGCAAAGTAAATATATCCAAGCAAATAATCAAGTTGAAGCATTAGA GGTAATGCAAATTATTAATAATTTACCTGCTCGAGAGGATTTACGAAATGCAGTTGATTTTATGTCAAAATTTATCAATA GTAATTCTAAATATTTACAACAAAAAATCAGTTCAGCAGATGTTAAATCACTAGAAAATGGTTATGTTTATCAGATTTTT TATCACAAAGGTGAAGAGGTGCGGGCGTATAGCCCAGTAATGACTATTATTAATCCCGATGATGTATATGTTATATTTTA TTTATCAAAAGATGATTTGACTAAGCTACATATTGGACAAACTATTGATTTTATTACACCTGATAATAAGAGTTTAGAGG CTAAAGTTAATTATATCTCACAAAAGGCTGAATATACACCACCATTATTGTATGGCATAAACTCTGACTCGGAAATTTCT TTTGAAGTGCATGCTAAGGTTGATTACTCCGCAAATAGCTCTGATATTCATATCGGAGAGCCTATAAAGGTAGAGCTAAG ATGA
Upstream 100 bases:
>100_bases TTTATTACATTAGTGGCTCTAGTATTAAAGTAATTCCTGGGTTAGTACAGATATCAGGTATATATCTTCACAAGAAAGTG GTAGGCTACTTAGATTAGAT
Downstream 100 bases:
>100_bases TAAGTGACAAAGATGATCAACTAATAATAGATGTCAAAAACCTTACCAAAGTCTATGGTGATAAAACTGTAGTTGATAAT ATCTCACTGCAAGTTAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: HlyD Family Secretion Protein; Secretion Protein HlyD; Efflux Protein; Secretion Protein Hlyd Family Protein; Membrane-Fusion Protein; Membrane Fusion Protein Family Protein; HlyD Family Secretion Family; Secretion Protein Hlyd-Related Protein; Auxiliary Transport Protein Membrane Fusion Protein Family; Biotinyl/Lipoyl-Carrier Protein; Secretion Protein; Multidrug Resistance Efflux Pump; Lipoprotein
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSQGESVKEGQYLFLIDSSKNQILLDSNKFLYSASQAVSENMSKGKRQPYIEKTAIDISNAKANLAVASKEYQRQQLLFK DDSTSQKEFEQEQSKYIQANNQVEALEVMQIINNLPAREDLRNAVDFMSKFINSNSKYLQQKISSADVKSLENGYVYQIF YHKGEEVRAYSPVMTIINPDDVYVIFYLSKDDLTKLHIGQTIDFITPDNKSLEAKVNYISQKAEYTPPLLYGINSDSEIS FEVHAKVDYSANSSDIHIGEPIKVELR
Sequences:
>Translated_267_residues MSQGESVKEGQYLFLIDSSKNQILLDSNKFLYSASQAVSENMSKGKRQPYIEKTAIDISNAKANLAVASKEYQRQQLLFK DDSTSQKEFEQEQSKYIQANNQVEALEVMQIINNLPAREDLRNAVDFMSKFINSNSKYLQQKISSADVKSLENGYVYQIF YHKGEEVRAYSPVMTIINPDDVYVIFYLSKDDLTKLHIGQTIDFITPDNKSLEAKVNYISQKAEYTPPLLYGINSDSEIS FEVHAKVDYSANSSDIHIGEPIKVELR >Mature_266_residues SQGESVKEGQYLFLIDSSKNQILLDSNKFLYSASQAVSENMSKGKRQPYIEKTAIDISNAKANLAVASKEYQRQQLLFKD DSTSQKEFEQEQSKYIQANNQVEALEVMQIINNLPAREDLRNAVDFMSKFINSNSKYLQQKISSADVKSLENGYVYQIFY HKGEEVRAYSPVMTIINPDDVYVIFYLSKDDLTKLHIGQTIDFITPDNKSLEAKVNYISQKAEYTPPLLYGINSDSEISF EVHAKVDYSANSSDIHIGEPIKVELR
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30431; Mature: 30300
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQGESVKEGQYLFLIDSSKNQILLDSNKFLYSASQAVSENMSKGKRQPYIEKTAIDISN CCCCCCCCCCCEEEEEECCCCEEEEECCCEEEHHHHHHHHHHHHCCCCCCEEHEEEEECC AKANLAVASKEYQRQQLLFKDDSTSQKEFEQEQSKYIQANNQVEALEVMQIINNLPARED CCCEEEEHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHH LRNAVDFMSKFINSNSKYLQQKISSADVKSLENGYVYQIFYHKGEEVRAYSPVMTIINPD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCEEEEECCC DVYVIFYLSKDDLTKLHIGQTIDFITPDNKSLEAKVNYISQKAEYTPPLLYGINSDSEIS CEEEEEEECCCCCEEEECCCEEEEECCCCCCEEHHHHHHHHCCCCCCCEEEECCCCCEEE FEVHAKVDYSANSSDIHIGEPIKVELR EEEEEEEECCCCCCCEECCCCEEEEEC >Mature Secondary Structure SQGESVKEGQYLFLIDSSKNQILLDSNKFLYSASQAVSENMSKGKRQPYIEKTAIDISN CCCCCCCCCCEEEEEECCCCEEEEECCCEEEHHHHHHHHHHHHCCCCCCEEHEEEEECC AKANLAVASKEYQRQQLLFKDDSTSQKEFEQEQSKYIQANNQVEALEVMQIINNLPARED CCCEEEEHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHH LRNAVDFMSKFINSNSKYLQQKISSADVKSLENGYVYQIFYHKGEEVRAYSPVMTIINPD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCEEEEECCC DVYVIFYLSKDDLTKLHIGQTIDFITPDNKSLEAKVNYISQKAEYTPPLLYGINSDSEIS CEEEEEEECCCCCEEEECCCEEEEECCCCCCEEHHHHHHHHCCCCCCCEEEECCCCCEEE FEVHAKVDYSANSSDIHIGEPIKVELR EEEEEEEECCCCCCCEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA