| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256772
Identifier: 89256772
GI number: 89256772
Start: 1409763
End: 1410986
Strand: Direct
Name: 89256772
Synonym: FTL_1483
Alternate gene names: NA
Gene position: 1409763-1410986 (Clockwise)
Preceding gene: 89256771
Following gene: 89256773
Centisome position: 74.35
GC content: 30.72
Gene sequence:
>1224_bases ATGATCTATAAATTTAATATTGATAATACACCCATATACTTTCAAGAATCCCACAACTTACCAATGTTAGATATTCAACT TAATTTCAGAGCTGGTTCATCTTTTGATAGTAAGCTAAATGGTTTAGCTGATTTAGCCGTAGGTATGTTTGCAACAAAGA CACAAAATTCTAATGAGCAAGAACTAATAAATAAAATTACCGATAACGGAATATCAATTCATGCTGAAACTACTAAAGAA TTTTTTAATATCAAAATACACCTTCTTAACGATAGTAGCATTATTGACAATACCCTTAAGATATTAGAAGAAATTTTCAC AATACCTAGTTTTGACGCTAATATCTTAGAAAGAGAAAGAGTTCAAACGCTAGCACACATTGATTATTTAAATCAACAAC CTAATTACTTAGCATCACTAGAATTCTCAAAAAATCTTTTTAGCAATAATCCATATAGTTACCCTACTATAGGTTATAAA GAAACTATTAGTAATATTAATACTAAAGATATCGAAGAATTCTTTGATAGATATATTTGCGCTGATAATGCAAATATCTG TCTTGTCGGTGCGATAAATCAGACTCAAGCAGAAAATATCTCTAAGCAGCTAGTGAGCTTTTTGGCTAAAGGTCAACAAA ATAACCAAAATTTTTATCAGAAAGCAAATGAACAATTGACTATAAAAAAAAGCTTCCCAAGTAAACAAACAGCAATTTTA CTAGGACATCAGCTGCTTATAGATATTAAAGATCCATTATACTTTCCATTAAAACTTGGCAATGAGATACTTGGTGGGGG CGGACTTAACTCTTTACTTTTTAATAAAGTCCGTGAAGAACTTGGTTTAGTTTATAATATTGCTAGTACAGCAAATGTCA ATCCCGATTATGGTAGCTTTGTAATATCTGCACAGACTAGTAACCCCTCTTTAGCTCTAGCAACTATAAACGATGTTTAT AATGACTTTATTAGCACTACTATAGATAAACAGACTCTAGCAAACTCTAAAAAACATATTGAAGGTACTCATTTACTTAG CTGTGTCAAAAATAGTTCTAAACTAAATATGCTCTCATCTATAGCAAACAAGAATCTACCTTTAGATTTCTTTGATAACT ATGTTGAGAATATCTGTTGTGTCACTGCTGAAGAGATACATCAAGCTTTCTTAGCAGTCCAAACTAATAAACTCATAACA GTAATGGTCGGAGATATTGAATAA
Upstream 100 bases:
>100_bases ACTTTATGATGTAACAGTTAGTGACATTAATCGTGTACTTGATAGATATTTTGATAAACAAAACCTTGCATCTCTACATT TATTAAGGGATTAAAAAATC
Downstream 100 bases:
>100_bases GTGAAAACCAATTCTATCCGTGTGATTGCTGGTAAATATAAAAATCGTAGATTGAAGTTTCCAAACGCTAATGGTTTACG ACCAACATCTGATCAACTAA
Product: peptidase M16 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MIYKFNIDNTPIYFQESHNLPMLDIQLNFRAGSSFDSKLNGLADLAVGMFATKTQNSNEQELINKITDNGISIHAETTKE FFNIKIHLLNDSSIIDNTLKILEEIFTIPSFDANILERERVQTLAHIDYLNQQPNYLASLEFSKNLFSNNPYSYPTIGYK ETISNINTKDIEEFFDRYICADNANICLVGAINQTQAENISKQLVSFLAKGQQNNQNFYQKANEQLTIKKSFPSKQTAIL LGHQLLIDIKDPLYFPLKLGNEILGGGGLNSLLFNKVREELGLVYNIASTANVNPDYGSFVISAQTSNPSLALATINDVY NDFISTTIDKQTLANSKKHIEGTHLLSCVKNSSKLNMLSSIANKNLPLDFFDNYVENICCVTAEEIHQAFLAVQTNKLIT VMVGDIE
Sequences:
>Translated_407_residues MIYKFNIDNTPIYFQESHNLPMLDIQLNFRAGSSFDSKLNGLADLAVGMFATKTQNSNEQELINKITDNGISIHAETTKE FFNIKIHLLNDSSIIDNTLKILEEIFTIPSFDANILERERVQTLAHIDYLNQQPNYLASLEFSKNLFSNNPYSYPTIGYK ETISNINTKDIEEFFDRYICADNANICLVGAINQTQAENISKQLVSFLAKGQQNNQNFYQKANEQLTIKKSFPSKQTAIL LGHQLLIDIKDPLYFPLKLGNEILGGGGLNSLLFNKVREELGLVYNIASTANVNPDYGSFVISAQTSNPSLALATINDVY NDFISTTIDKQTLANSKKHIEGTHLLSCVKNSSKLNMLSSIANKNLPLDFFDNYVENICCVTAEEIHQAFLAVQTNKLIT VMVGDIE >Mature_407_residues MIYKFNIDNTPIYFQESHNLPMLDIQLNFRAGSSFDSKLNGLADLAVGMFATKTQNSNEQELINKITDNGISIHAETTKE FFNIKIHLLNDSSIIDNTLKILEEIFTIPSFDANILERERVQTLAHIDYLNQQPNYLASLEFSKNLFSNNPYSYPTIGYK ETISNINTKDIEEFFDRYICADNANICLVGAINQTQAENISKQLVSFLAKGQQNNQNFYQKANEQLTIKKSFPSKQTAIL LGHQLLIDIKDPLYFPLKLGNEILGGGGLNSLLFNKVREELGLVYNIASTANVNPDYGSFVISAQTSNPSLALATINDVY NDFISTTIDKQTLANSKKHIEGTHLLSCVKNSSKLNMLSSIANKNLPLDFFDNYVENICCVTAEEIHQAFLAVQTNKLIT VMVGDIE
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 45640; Mature: 45640
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYKFNIDNTPIYFQESHNLPMLDIQLNFRAGSSFDSKLNGLADLAVGMFATKTQNSNEQ CEEEEECCCCCEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCHH ELINKITDNGISIHAETTKEFFNIKIHLLNDSSIIDNTLKILEEIFTIPSFDANILERER HHHHHHCCCCEEEEEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH VQTLAHIDYLNQQPNYLASLEFSKNLFSNNPYSYPTIGYKETISNINTKDIEEFFDRYIC HHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHEE ADNANICLVGAINQTQAENISKQLVSFLAKGQQNNQNFYQKANEQLTIKKSFPSKQTAIL CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEECCCCCCEEEE LGHQLLIDIKDPLYFPLKLGNEILGGGGLNSLLFNKVREELGLVYNIASTANVNPDYGSF ECCEEEEEECCCEEEEHHCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCE VISAQTSNPSLALATINDVYNDFISTTIDKQTLANSKKHIEGTHLLSCVKNSSKLNMLSS EEEEECCCCCEEEEEHHHHHHHHHHHHCCHHHHHCCHHHCCHHHHHHHHHCCHHHHHHHH IANKNLPLDFFDNYVENICCVTAEEIHQAFLAVQTNKLITVMVGDIE HHCCCCCHHHHHHHHHHEECCCHHHHHHHHHHEECCCEEEEEEECCC >Mature Secondary Structure MIYKFNIDNTPIYFQESHNLPMLDIQLNFRAGSSFDSKLNGLADLAVGMFATKTQNSNEQ CEEEEECCCCCEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCHH ELINKITDNGISIHAETTKEFFNIKIHLLNDSSIIDNTLKILEEIFTIPSFDANILERER HHHHHHCCCCEEEEEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH VQTLAHIDYLNQQPNYLASLEFSKNLFSNNPYSYPTIGYKETISNINTKDIEEFFDRYIC HHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHEE ADNANICLVGAINQTQAENISKQLVSFLAKGQQNNQNFYQKANEQLTIKKSFPSKQTAIL CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEECCCCCCEEEE LGHQLLIDIKDPLYFPLKLGNEILGGGGLNSLLFNKVREELGLVYNIASTANVNPDYGSF ECCEEEEEECCCEEEEHHCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCE VISAQTSNPSLALATINDVYNDFISTTIDKQTLANSKKHIEGTHLLSCVKNSSKLNMLSS EEEEECCCCCEEEEEHHHHHHHHHHHHCCHHHHHCCHHHCCHHHHHHHHHCCHHHHHHHH IANKNLPLDFFDNYVENICCVTAEEIHQAFLAVQTNKLITVMVGDIE HHCCCCCHHHHHHHHHHEECCCHHHHHHHHHHEECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]