| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is ispZ
Identifier: 51596445
GI number: 51596445
Start: 2496344
End: 2496886
Strand: Reverse
Name: ispZ
Synonym: YPTB2119
Alternate gene names: 51596445
Gene position: 2496886-2496344 (Counterclockwise)
Preceding gene: 51596447
Following gene: 51596444
Centisome position: 52.63
GC content: 41.25
Gene sequence:
>543_bases ATGAAGCAACTTTTAGATTTTCTCCCATTAGTCGTGTTCTTTATTTTTTATAAGATGTACGACATTTTTGTCGCTTCCGG GGCACTCATTGTTGCCACCTTGGTAGCTCTGGCCTTTACCTGGCTGAAATATCGCAAAGTCGAAAAAATGACATTGGTTA CTGCAGCGATGGTACTGGTGTTCGGTACATTAACACTCGCATTCCACAGTGACTTGTTTATTAAATGGAAAGTGACTGTT TTATATGTGCTGTTCGCCTTGGCTTTATTAGTCAGTCAATGGGTGATGAAGAAGCCGTTGATTCAACGGATGTTGGGTAA AGAGTTAACCTTACCTGACAAGGTTTGGTCAACATTGAACCTGTCGTGGGCCATTTTCTTTCTGGTCTGTGGGCTACTGA ATATTTATGTCGCATTTTGGTTGCCTCAGGATATTTGGGTCAACTTTAAAGTTTTCGGCTTAACCGCTCTGACACTGATA TTTACGTTGATCAGTGGCGTTTATATTTATCGCCATATGCCGGAAGAGCAGAAGAAGTCTTAA
Upstream 100 bases:
>100_bases CATTCAGATTGATTATTAACGATAATAGGCTTTTACTACGGATACCCTCCCCCTGCTGAATCCGGTATATTCGGGCGGTA TACAAATGATGGATTGATTC
Downstream 100 bases:
>100_bases ATAAACGTTATTTTGATGCTCACTGAACGCTCAGTGGGCCGCCCTTAGTCAGTGGATTAACTTTTAAAAGCAGACAGAAA TGACTCAGGAACAACAACTA
Product: intracellular septation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MKQLLDFLPLVVFFIFYKMYDIFVASGALIVATLVALAFTWLKYRKVEKMTLVTAAMVLVFGTLTLAFHSDLFIKWKVTV LYVLFALALLVSQWVMKKPLIQRMLGKELTLPDKVWSTLNLSWAIFFLVCGLLNIYVAFWLPQDIWVNFKVFGLTALTLI FTLISGVYIYRHMPEEQKKS
Sequences:
>Translated_180_residues MKQLLDFLPLVVFFIFYKMYDIFVASGALIVATLVALAFTWLKYRKVEKMTLVTAAMVLVFGTLTLAFHSDLFIKWKVTV LYVLFALALLVSQWVMKKPLIQRMLGKELTLPDKVWSTLNLSWAIFFLVCGLLNIYVAFWLPQDIWVNFKVFGLTALTLI FTLISGVYIYRHMPEEQKKS >Mature_180_residues MKQLLDFLPLVVFFIFYKMYDIFVASGALIVATLVALAFTWLKYRKVEKMTLVTAAMVLVFGTLTLAFHSDLFIKWKVTV LYVLFALALLVSQWVMKKPLIQRMLGKELTLPDKVWSTLNLSWAIFFLVCGLLNIYVAFWLPQDIWVNFKVFGLTALTLI FTLISGVYIYRHMPEEQKKS
Specific function: Involved in cell division; probably involved in intracellular septation [H]
COG id: COG2917
COG function: function code D; Intracellular septation protein A
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispZ family [H]
Homologues:
Organism=Escherichia coli, GI1787507, Length=179, Percent_Identity=75.4189944134078, Blast_Score=284, Evalue=2e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006008 [H]
Pfam domain/function: PF04279 IspA [H]
EC number: NA
Molecular weight: Translated: 20876; Mature: 20876
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLLDFLPLVVFFIFYKMYDIFVASGALIVATLVALAFTWLKYRKVEKMTLVTAAMVLV CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGTLTLAFHSDLFIKWKVTVLYVLFALALLVSQWVMKKPLIQRMLGKELTLPDKVWSTLN HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LSWAIFFLVCGLLNIYVAFWLPQDIWVNFKVFGLTALTLIFTLISGVYIYRHMPEEQKKS HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure MKQLLDFLPLVVFFIFYKMYDIFVASGALIVATLVALAFTWLKYRKVEKMTLVTAAMVLV CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGTLTLAFHSDLFIKWKVTVLYVLFALALLVSQWVMKKPLIQRMLGKELTLPDKVWSTLN HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LSWAIFFLVCGLLNIYVAFWLPQDIWVNFKVFGLTALTLIFTLISGVYIYRHMPEEQKKS HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA