| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596304
Identifier: 51596304
GI number: 51596304
Start: 2330358
End: 2331545
Strand: Direct
Name: 51596304
Synonym: YPTB1978
Alternate gene names: NA
Gene position: 2330358-2331545 (Clockwise)
Preceding gene: 51596303
Following gene: 51596308
Centisome position: 49.12
GC content: 50.51
Gene sequence:
>1188_bases ATGAAGACGTTAGATGATTTGATCCCCCCGGCTACCCGCTGTATCGATCTGCTGGCCCCGCCTTTTTCTGGGCACTTACA CCCGATACTGGCGTTGGGCCGCATGTTGGCTAAAAATTACGAGGTACGCATCATCAGCACGCAAGATGCGTTGGCGCGTA TCACGGCGGCAGAGCTAAAGGGCATTGCTTTGCCGGGTGAATATGACCCGCTGTTACAGGCAATTGCCAACCCAGACTAT GCGGTTAAAAGCAGTCCGCTGAAGCTTTATCGCCAATTTAAATCTGCGGTTGGGTTACTCGTCGAGTTTGCCTCGGCACT GGAAAAACTTTATCAACATGATGGTGCGCCAGACCTGGTTATTGCTGACTTTACTTTACCCGTGGTAGGGACGGTGAGTA AAAAATTGGGCATCCCTTGGTGGACGAGTTTACCCTCGCCCTGTGTGCTGGAAACGTTAGACGGCCCACCGGCCTATTGC GGTGGCCTTTATCCAGCGAAAACTGCTATGGATAACGTCAGTCAGTTTATCGCGCGGAAAAAAGTCCGTTGGTTTAAAAA AACGCTTTTTTGGTTATTCCGTAGAACAATCTCAACAACCGGGATCACGGCGTTATATCGCGCCGATGGTACAGAAAGTG CTTATTCAGCAGACTGTATTCTGGCTCTGGGTGATGTCGCATTTGAATTTACCCGAACCTGGCCGGAGAGCGTCCATTTT ATTGGGCCAGCGCTCTATACACCGCCTAATTTGCAGCCTGCGCCGCACTTTGAAGCAGGTCGCCGCCATGTGCTAGTGAC CTTAGGGACTCATCTGGCCTGGCATAAAGATGAAGTGGTAAAGGCGGTTGAGAGACTTGCCCGAACCATGCCAGAGTCAG TTTTTCATTTCACTGAGGGGGATCCGAATGCGGCTTGCCATCAGCAGACCGATAATTTCATCCGCTTGCCGTGGATAGAT TATGAAACCTGTCTTGGTCACTACGATGTGGTGATTCATCATGGTGGTGCAGGAATTCTGTATTACTGTCTGAAACATAA TATACCGGCGTTGGTCTATCCGGTTGATTTCGATCAATTTGACCATGCTGCCCGCCTTGATGCGTCGGGGAAAGGTCTTT GGTTAAAAGGGGGGCTGAGCGCGTTGGCGAATGCCAAAACTCAGATTGAGCAGTTAACTGCCCGTTAG
Upstream 100 bases:
>100_bases GCAAAGTCAGTGGTGGCCATTTGAATTATCTCTCTAACCCAGCATTACTGACGCTTTGTGAGCGTTTTATTGCGGCAGTT GAATCAACTCAGGGATTGCG
Downstream 100 bases:
>100_bases GGATAAAAATAACGTAAAGGGGTAGGTTGCCGACAAAGTCAAATGAAGGCGAAATAGTGTGAGGCGGGGCGATTTAACCA ACGTTCGGATGATCCACAAT
Product: glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MKTLDDLIPPATRCIDLLAPPFSGHLHPILALGRMLAKNYEVRIISTQDALARITAAELKGIALPGEYDPLLQAIANPDY AVKSSPLKLYRQFKSAVGLLVEFASALEKLYQHDGAPDLVIADFTLPVVGTVSKKLGIPWWTSLPSPCVLETLDGPPAYC GGLYPAKTAMDNVSQFIARKKVRWFKKTLFWLFRRTISTTGITALYRADGTESAYSADCILALGDVAFEFTRTWPESVHF IGPALYTPPNLQPAPHFEAGRRHVLVTLGTHLAWHKDEVVKAVERLARTMPESVFHFTEGDPNAACHQQTDNFIRLPWID YETCLGHYDVVIHHGGAGILYYCLKHNIPALVYPVDFDQFDHAARLDASGKGLWLKGGLSALANAKTQIEQLTAR
Sequences:
>Translated_395_residues MKTLDDLIPPATRCIDLLAPPFSGHLHPILALGRMLAKNYEVRIISTQDALARITAAELKGIALPGEYDPLLQAIANPDY AVKSSPLKLYRQFKSAVGLLVEFASALEKLYQHDGAPDLVIADFTLPVVGTVSKKLGIPWWTSLPSPCVLETLDGPPAYC GGLYPAKTAMDNVSQFIARKKVRWFKKTLFWLFRRTISTTGITALYRADGTESAYSADCILALGDVAFEFTRTWPESVHF IGPALYTPPNLQPAPHFEAGRRHVLVTLGTHLAWHKDEVVKAVERLARTMPESVFHFTEGDPNAACHQQTDNFIRLPWID YETCLGHYDVVIHHGGAGILYYCLKHNIPALVYPVDFDQFDHAARLDASGKGLWLKGGLSALANAKTQIEQLTAR >Mature_395_residues MKTLDDLIPPATRCIDLLAPPFSGHLHPILALGRMLAKNYEVRIISTQDALARITAAELKGIALPGEYDPLLQAIANPDY AVKSSPLKLYRQFKSAVGLLVEFASALEKLYQHDGAPDLVIADFTLPVVGTVSKKLGIPWWTSLPSPCVLETLDGPPAYC GGLYPAKTAMDNVSQFIARKKVRWFKKTLFWLFRRTISTTGITALYRADGTESAYSADCILALGDVAFEFTRTWPESVHF IGPALYTPPNLQPAPHFEAGRRHVLVTLGTHLAWHKDEVVKAVERLARTMPESVFHFTEGDPNAACHQQTDNFIRLPWID YETCLGHYDVVIHHGGAGILYYCLKHNIPALVYPVDFDQFDHAARLDASGKGLWLKGGLSALANAKTQIEQLTAR
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43699; Mature: 43699
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLDDLIPPATRCIDLLAPPFSGHLHPILALGRMLAKNYEVRIISTQDALARITAAELK CCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHC GIALPGEYDPLLQAIANPDYAVKSSPLKLYRQFKSAVGLLVEFASALEKLYQHDGAPDLV CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IADFTLPVVGTVSKKLGIPWWTSLPSPCVLETLDGPPAYCGGLYPAKTAMDNVSQFIARK EEEECCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHH KVRWFKKTLFWLFRRTISTTGITALYRADGTESAYSADCILALGDVAFEFTRTWPESVHF HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH IGPALYTPPNLQPAPHFEAGRRHVLVTLGTHLAWHKDEVVKAVERLARTMPESVFHFTEG HCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHHCHHHHEECCCC DPNAACHQQTDNFIRLPWIDYETCLGHYDVVIHHGGAGILYYCLKHNIPALVYPVDFDQF CCCCHHHHCCCCEEECCCCCHHHHCCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCHHC DHAARLDASGKGLWLKGGLSALANAKTQIEQLTAR CCHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTLDDLIPPATRCIDLLAPPFSGHLHPILALGRMLAKNYEVRIISTQDALARITAAELK CCCHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHC GIALPGEYDPLLQAIANPDYAVKSSPLKLYRQFKSAVGLLVEFASALEKLYQHDGAPDLV CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IADFTLPVVGTVSKKLGIPWWTSLPSPCVLETLDGPPAYCGGLYPAKTAMDNVSQFIARK EEEECCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHH KVRWFKKTLFWLFRRTISTTGITALYRADGTESAYSADCILALGDVAFEFTRTWPESVHF HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH IGPALYTPPNLQPAPHFEAGRRHVLVTLGTHLAWHKDEVVKAVERLARTMPESVFHFTEG HCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHHCHHHHEECCCC DPNAACHQQTDNFIRLPWIDYETCLGHYDVVIHHGGAGILYYCLKHNIPALVYPVDFDQF CCCCHHHHCCCCEEECCCCCHHHHCCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCHHC DHAARLDASGKGLWLKGGLSALANAKTQIEQLTAR CCHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA