| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238677
Identifier: 57238677
GI number: 57238677
Start: 1730284
End: 1730721
Strand: Reverse
Name: 57238677
Synonym: CJE1838
Alternate gene names: NA
Gene position: 1730721-1730284 (Counterclockwise)
Preceding gene: 57238678
Following gene: 57238667
Centisome position: 97.35
GC content: 34.93
Gene sequence:
>438_bases ATGAAAAAAATAATTTTAACCATTCTTTTTTTACTCACTCTTACGCAAGCTAAGGAAATACAAGTTTATGAAAGTCCTAC TTGTGGCTGTTGTGATCTTTGGGCTGATTATATGAAAGCTAAGGGTTATGAGGTTAGTGTTCACAAAACCAATGATTTTC TTAAAATCAAAGAAAAAATGGGTATAAAAGATGAGTATCAAGGTTGCCATACGGGTGTGATCGAAGGCTATGCTATTGAA GGGCATGTTCCTGAAAGTGCTATAGCATGGTTGCTTGAAAACAAACCTAAAGATGTTATAGGAATTTCAGCTCCTGGCAT GCCGCAAGGAAGCCCAGGAATGGAACAAGGTTATAGTGAAAAATATCCTGTAATTTTGATGAAAAAAGATGGAAGCTATG AGCTTTATGGATATTTTATAGGAGATAAAAAGCTTTAA
Upstream 100 bases:
>100_bases TCTTGATTAAATTTTTGTAAATTCATTTTTAGTGTTAAAAATGTGATGGTATTAACTTTATAAAAGTATTATTATATATT TTTTACTTAGGATAGCAATT
Downstream 100 bases:
>100_bases AGTAAATTCTTAGCTTTTTACTTTTTTGATTTCTTTTTCAAGTATGCTATAAGGAGTTAAGCCTATGAATTTTTCATCCA TTTTTCCTTCTTTGAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKKIILTILFLLTLTQAKEIQVYESPTCGCCDLWADYMKAKGYEVSVHKTNDFLKIKEKMGIKDEYQGCHTGVIEGYAIE GHVPESAIAWLLENKPKDVIGISAPGMPQGSPGMEQGYSEKYPVILMKKDGSYELYGYFIGDKKL
Sequences:
>Translated_145_residues MKKIILTILFLLTLTQAKEIQVYESPTCGCCDLWADYMKAKGYEVSVHKTNDFLKIKEKMGIKDEYQGCHTGVIEGYAIE GHVPESAIAWLLENKPKDVIGISAPGMPQGSPGMEQGYSEKYPVILMKKDGSYELYGYFIGDKKL >Mature_145_residues MKKIILTILFLLTLTQAKEIQVYESPTCGCCDLWADYMKAKGYEVSVHKTNDFLKIKEKMGIKDEYQGCHTGVIEGYAIE GHVPESAIAWLLENKPKDVIGISAPGMPQGSPGMEQGYSEKYPVILMKKDGSYELYGYFIGDKKL
Specific function: Unknown
COG id: COG3019
COG function: function code R; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16250; Mature: 16250
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIILTILFLLTLTQAKEIQVYESPTCGCCDLWADYMKAKGYEVSVHKTNDFLKIKEKM CHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEHHHC GIKDEYQGCHTGVIEGYAIEGHVPESAIAWLLENKPKDVIGISAPGMPQGSPGMEQGYSE CCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCC KYPVILMKKDGSYELYGYFIGDKKL CCCEEEEEECCCEEEEEEEECCCCC >Mature Secondary Structure MKKIILTILFLLTLTQAKEIQVYESPTCGCCDLWADYMKAKGYEVSVHKTNDFLKIKEKM CHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEHHHC GIKDEYQGCHTGVIEGYAIEGHVPESAIAWLLENKPKDVIGISAPGMPQGSPGMEQGYSE CCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCC KYPVILMKKDGSYELYGYFIGDKKL CCCEEEEEECCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA