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The map label for this gene is ybjZ [C]

Identifier: 57238672

GI number: 57238672

Start: 1726278

End: 1727567

Strand: Direct

Name: ybjZ [C]

Synonym: CJE1833

Alternate gene names: 57238672

Gene position: 1726278-1727567 (Clockwise)

Preceding gene: 57238671

Following gene: 57238673

Centisome position: 97.1

GC content: 32.25

Gene sequence:

>1290_bases
ATGTTGGCTAAAATGATTTTTAACTCTATATTTAAAAACAAAATTCAAAAATTTTTAGCCTTTCTTACTTGTTTTTTAGC
CACGCTTTTGCTCTCTACTATGCTAAATATTACCCTAAGTATAGGCGATGAAGTAACTAAACAACTCAAAAGTTATGGCT
CTAATATCCTTGTTTTACCCAAAGGCTCAAGTCTTAGTATAGAAATAGGTAATGAACTTTATAAACCCTTAAAAAACAAA
AACTACCTAGAAGAAAAAAATTTATATATGATTAAAGACATTTATTGGCGTAACAACATCACCGCACTTGCTCCTTTTTT
AGAAGGTAAAATCACAATTGAAAACTCCCAGCAAAAAGCACTTATTTATGGCACTTATTTTCAAAAAGCCATAAAAATTA
AAGATGATGATGATTTTATCACAGGTATAAAAAGTCTTTATCCTTATTTAGCAGTCCAAAGAGAATGGGCAAAAGATGAT
AGCAATGAAATCATGCTAGGCGAAGACTTTGCTAAAAACAATAAATTAAAATTAGGAGATACTATCAAACTCATAGGAGA
AAACAATCAAAGCAAAGAAGCAAAAATCGTAGGTATTTTGCTTCATGCCAATCCTAAAATGTCAAATAAAATCATCGCTC
CTTTAAATTTAGCTCAAGATTTACTCAACAAACAAGGATTTTACTCAAGTGCAGAAGTAAGAGCTTTTACCATACCTGAA
TCAGCCCTTTCTGAAAAAGTGCGTCGCATGGGCGAAGAAAAATTAGATCAGTTAGAATATGACAAATGGTATTGCTCAGC
CTATGTAGGCTCAATCGCTAGTCAAATTAGCGATGGCTTACCAGGTGCTGATGCAAAAGCTCTAAATGCTATAAGCGATG
CTCAAAGCTTGGTGGTTAAAAAGATCCAATCCTTAATGGGCATTACTTGCATTATTTGTCTTATTGTTGCAAGTATTGCG
ATTTCAAGTCTAATGAGTTCTGAAATTCATCGTAGAAAAAAAGAAATAGGACTTTTAAAAGTACTTGGTGCTAATACTTT
TCAAATTTATCTCATCTTTGCTGGTGAAAATTTAATCGTAGCTTTATTTGCTGCTTTATTTGGATTTATTTTTGGCACAG
CACTTTCTCAAATCATCAGCCTTAGTATTTTTGGATATTTTATTGATATAGCCTTTATAGCTTTACCTTTAAGCTTTATT
TTTGCAGGACTTATTGCCTTACTAGGTTGCTTGCTTCCTATAAAAAATATCACACAACTTTCAGCTGCAGGAGTGTTTTA
TGGTAGATAA

Upstream 100 bases:

>100_bases
TATTATTTTTCAAATCAAAACAACTATGAAGAATTTAAAAAAGATCCTACAAAACATGTAGAAGAAAACGAAGCCCAATT
TTTAATCCAAAGGAGAAACG

Downstream 100 bases:

>100_bases
GTTTTTCCTTAATGAACTTTTTAAAAGCATTAGCTTTTCTTATCAAAGACTTTTTATTATAGTTTTAAGTGTTTTTATAG
GAGCACTTACTTGCTCAGCT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGDEVTKQLKSYGSNILVLPKGSSLSIEIGNELYKPLKNK
NYLEEKNLYMIKDIYWRNNITALAPFLEGKITIENSQQKALIYGTYFQKAIKIKDDDDFITGIKSLYPYLAVQREWAKDD
SNEIMLGEDFAKNNKLKLGDTIKLIGENNQSKEAKIVGILLHANPKMSNKIIAPLNLAQDLLNKQGFYSSAEVRAFTIPE
SALSEKVRRMGEEKLDQLEYDKWYCSAYVGSIASQISDGLPGADAKALNAISDAQSLVVKKIQSLMGITCIICLIVASIA
ISSLMSSEIHRRKKEIGLLKVLGANTFQIYLIFAGENLIVALFAALFGFIFGTALSQIISLSIFGYFIDIAFIALPLSFI
FAGLIALLGCLLPIKNITQLSAAGVFYGR

Sequences:

>Translated_429_residues
MLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGDEVTKQLKSYGSNILVLPKGSSLSIEIGNELYKPLKNK
NYLEEKNLYMIKDIYWRNNITALAPFLEGKITIENSQQKALIYGTYFQKAIKIKDDDDFITGIKSLYPYLAVQREWAKDD
SNEIMLGEDFAKNNKLKLGDTIKLIGENNQSKEAKIVGILLHANPKMSNKIIAPLNLAQDLLNKQGFYSSAEVRAFTIPE
SALSEKVRRMGEEKLDQLEYDKWYCSAYVGSIASQISDGLPGADAKALNAISDAQSLVVKKIQSLMGITCIICLIVASIA
ISSLMSSEIHRRKKEIGLLKVLGANTFQIYLIFAGENLIVALFAALFGFIFGTALSQIISLSIFGYFIDIAFIALPLSFI
FAGLIALLGCLLPIKNITQLSAAGVFYGR
>Mature_429_residues
MLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGDEVTKQLKSYGSNILVLPKGSSLSIEIGNELYKPLKNK
NYLEEKNLYMIKDIYWRNNITALAPFLEGKITIENSQQKALIYGTYFQKAIKIKDDDDFITGIKSLYPYLAVQREWAKDD
SNEIMLGEDFAKNNKLKLGDTIKLIGENNQSKEAKIVGILLHANPKMSNKIIAPLNLAQDLLNKQGFYSSAEVRAFTIPE
SALSEKVRRMGEEKLDQLEYDKWYCSAYVGSIASQISDGLPGADAKALNAISDAQSLVVKKIQSLMGITCIICLIVASIA
ISSLMSSEIHRRKKEIGLLKVLGANTFQIYLIFAGENLIVALFAALFGFIFGTALSQIISLSIFGYFIDIAFIALPLSFI
FAGLIALLGCLLPIKNITQLSAAGVFYGR

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 47547; Mature: 47547

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGDEVTKQLKSYGSNILVLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEE
KGSSLSIEIGNELYKPLKNKNYLEEKNLYMIKDIYWRNNITALAPFLEGKITIENSQQKA
CCCEEEEEECHHHHHHHCCCCCCCCCCEEEEEEEHCCCCCHHHHHHHCCEEEEECCCCCE
LIYGTYFQKAIKIKDDDDFITGIKSLYPYLAVQREWAKDDSNEIMLGEDFAKNNKLKLGD
EEEEHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEECCC
TIKLIGENNQSKEAKIVGILLHANPKMSNKIIAPLNLAQDLLNKQGFYSSAEVRAFTIPE
EEEEECCCCCCCCEEEEEEEEECCCCCCCCEECHHHHHHHHHHCCCCCCCCCEEEEECCH
SALSEKVRRMGEEKLDQLEYDKWYCSAYVGSIASQISDGLPGADAKALNAISDAQSLVVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KIQSLMGITCIICLIVASIAISSLMSSEIHRRKKEIGLLKVLGANTFQIYLIFAGENLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCEEEEEEEEECCHHHH
ALFAALFGFIFGTALSQIISLSIFGYFIDIAFIALPLSFIFAGLIALLGCLLPIKNITQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAAGVFYGR
HHCCCCCCC
>Mature Secondary Structure
MLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGDEVTKQLKSYGSNILVLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEE
KGSSLSIEIGNELYKPLKNKNYLEEKNLYMIKDIYWRNNITALAPFLEGKITIENSQQKA
CCCEEEEEECHHHHHHHCCCCCCCCCCEEEEEEEHCCCCCHHHHHHHCCEEEEECCCCCE
LIYGTYFQKAIKIKDDDDFITGIKSLYPYLAVQREWAKDDSNEIMLGEDFAKNNKLKLGD
EEEEHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEECCC
TIKLIGENNQSKEAKIVGILLHANPKMSNKIIAPLNLAQDLLNKQGFYSSAEVRAFTIPE
EEEEECCCCCCCCEEEEEEEEECCCCCCCCEECHHHHHHHHHHCCCCCCCCCEEEEECCH
SALSEKVRRMGEEKLDQLEYDKWYCSAYVGSIASQISDGLPGADAKALNAISDAQSLVVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KIQSLMGITCIICLIVASIAISSLMSSEIHRRKKEIGLLKVLGANTFQIYLIFAGENLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCEEEEEEEEECCHHHH
ALFAALFGFIFGTALSQIISLSIFGYFIDIAFIALPLSFIFAGLIALLGCLLPIKNITQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAAGVFYGR
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]