| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238671
Identifier: 57238671
GI number: 57238671
Start: 1724885
End: 1726288
Strand: Direct
Name: 57238671
Synonym: CJE1832
Alternate gene names: NA
Gene position: 1724885-1726288 (Clockwise)
Preceding gene: 57238670
Following gene: 57238672
Centisome position: 97.02
GC content: 28.28
Gene sequence:
>1404_bases ATGAGTATATATTTTGTGCATTTTCTTATCAGTGTTTTACCACTAAGTATTTTAATGGCCTTTATCGCTTCTGATAAAAA ATATATTTTTAAAAGTTTTTTAGTAGTTTTTTTGGGCTTTTTATTTGGATATTTTGCTTTTTTTATCGCAGCACAATTTT TAAAAACCGAAAATTTAATCTTTAATTTTGATTTTGTTTTTATAGGTTTATTGCTAGTAAGCTTTATATTTTATTTTTGG AAAAAAATTGAAATTTTAAATTTTATTTTATTGGGAATTTTAAGTTTTTGCACCGCTTTGCATTATTATTTTTTAAGTCA AGATTTCCCTATTTTTACTAGCTCTTTAATCGATAGCGAAGGTATAAGTTCTTTAGGTTTTATTGCTTTAGCCTTGCTTG TTTGTATTTTGATTTTCTTCTTTTTAAAATGGCAAAAAAATTTTAATCAAAAAACAAGCTTTATGCTGTTTTTACTGCTT ATCCTTATAGAAAGCGATAAAGCTCTAGCCAATATCTTGCTTACTTTAATGCGAAATTCCATCATAGAAACTCATGCTTT TTTGGTGAGTTTTGTAGGAAAAAGTAATTATTTTGGTGTTTTTGGAATTTATGTTTATTTAATTTTCATCACTTTTTTAG CATTCTTAAGCCTAAAAATTCGCAAAAAAAATATAAGCAAAAAACAAATTTTAGATATAAATTATCGCAAAAACGAAGCT AAAACAAGTCTTATTAATCGTTATTTTTCCAGTGTTTTTATCTCCTGTGTTATAAGTTTTTGCATTATTTTATACTTTTT TATGGTAAGCTCTAAGCCTTTAACCATAGATGAGCCTAAAGAAATTTTACCCGATAAGAATGGCAAATTTATCTTTGATA TAGCTCTTTTAAGAGACAACAAACTCCACCGCTTTGCTTATATCAGTGCTGAAGGCAAAGTGATAAGGTTTTTTCTTATC AATAAAAGAGAAGATAGGGATTCTCCTGTAGCTGTTTTTGATGCTTGTATGATTTGTGGAGATATGGGCTATATCAAAAA AGATGGACAACTTATTTGCATTTCTTGCAATGTGCGTATTTTCTTGCCTAGTGTAGGCAAAAGCGGAGGTTGCAATCCTA TCCCACTCAAATACGAATACGATGGTAAAAAAATCACCATAGATGTTAAAGATGTAATAGCAGGATCTAATTATTTTAGT CAAATCAAAGAAATCGAAGTGCAAGATCCTGTATCAAAAACAAAGGTTATAAACACCCAAGCTCCTTTTTCTTATAGCTA TAAAGGGATTACTTATTATTTTTCAAATCAAAACAACTATGAAGAATTTAAAAAAGATCCTACAAAACATGTAGAAGAAA ACGAAGCCCAATTTTTAATCCAAAGGAGAAACGATGTTGGCTAA
Upstream 100 bases:
>100_bases ACAGGTACGCCAAAATGATTTTACACTCGGATTTTCCGAGTGTTTAAATATTTTTATTTTTATTTGAAAAATTAAAATAA CAATGTTTAAAGAGTAAATT
Downstream 100 bases:
>100_bases AATGATTTTTAACTCTATATTTAAAAACAAAATTCAAAAATTTTTAGCCTTTCTTACTTGTTTTTTAGCCACGCTTTTGC TCTCTACTATGCTAAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: YHS Domain-Containing Protein; YHS Domain Protein
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MSIYFVHFLISVLPLSILMAFIASDKKYIFKSFLVVFLGFLFGYFAFFIAAQFLKTENLIFNFDFVFIGLLLVSFIFYFW KKIEILNFILLGILSFCTALHYYFLSQDFPIFTSSLIDSEGISSLGFIALALLVCILIFFFLKWQKNFNQKTSFMLFLLL ILIESDKALANILLTLMRNSIIETHAFLVSFVGKSNYFGVFGIYVYLIFITFLAFLSLKIRKKNISKKQILDINYRKNEA KTSLINRYFSSVFISCVISFCIILYFFMVSSKPLTIDEPKEILPDKNGKFIFDIALLRDNKLHRFAYISAEGKVIRFFLI NKREDRDSPVAVFDACMICGDMGYIKKDGQLICISCNVRIFLPSVGKSGGCNPIPLKYEYDGKKITIDVKDVIAGSNYFS QIKEIEVQDPVSKTKVINTQAPFSYSYKGITYYFSNQNNYEEFKKDPTKHVEENEAQFLIQRRNDVG
Sequences:
>Translated_467_residues MSIYFVHFLISVLPLSILMAFIASDKKYIFKSFLVVFLGFLFGYFAFFIAAQFLKTENLIFNFDFVFIGLLLVSFIFYFW KKIEILNFILLGILSFCTALHYYFLSQDFPIFTSSLIDSEGISSLGFIALALLVCILIFFFLKWQKNFNQKTSFMLFLLL ILIESDKALANILLTLMRNSIIETHAFLVSFVGKSNYFGVFGIYVYLIFITFLAFLSLKIRKKNISKKQILDINYRKNEA KTSLINRYFSSVFISCVISFCIILYFFMVSSKPLTIDEPKEILPDKNGKFIFDIALLRDNKLHRFAYISAEGKVIRFFLI NKREDRDSPVAVFDACMICGDMGYIKKDGQLICISCNVRIFLPSVGKSGGCNPIPLKYEYDGKKITIDVKDVIAGSNYFS QIKEIEVQDPVSKTKVINTQAPFSYSYKGITYYFSNQNNYEEFKKDPTKHVEENEAQFLIQRRNDVG >Mature_466_residues SIYFVHFLISVLPLSILMAFIASDKKYIFKSFLVVFLGFLFGYFAFFIAAQFLKTENLIFNFDFVFIGLLLVSFIFYFWK KIEILNFILLGILSFCTALHYYFLSQDFPIFTSSLIDSEGISSLGFIALALLVCILIFFFLKWQKNFNQKTSFMLFLLLI LIESDKALANILLTLMRNSIIETHAFLVSFVGKSNYFGVFGIYVYLIFITFLAFLSLKIRKKNISKKQILDINYRKNEAK TSLINRYFSSVFISCVISFCIILYFFMVSSKPLTIDEPKEILPDKNGKFIFDIALLRDNKLHRFAYISAEGKVIRFFLIN KREDRDSPVAVFDACMICGDMGYIKKDGQLICISCNVRIFLPSVGKSGGCNPIPLKYEYDGKKITIDVKDVIAGSNYFSQ IKEIEVQDPVSKTKVINTQAPFSYSYKGITYYFSNQNNYEEFKKDPTKHVEENEAQFLIQRRNDVG
Specific function: Unknown
COG id: COG4393
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53990; Mature: 53859
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIYFVHFLISVLPLSILMAFIASDKKYIFKSFLVVFLGFLFGYFAFFIAAQFLKTENLI CEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE FNFDFVFIGLLLVSFIFYFWKKIEILNFILLGILSFCTALHYYFLSQDFPIFTSSLIDSE EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC GISSLGFIALALLVCILIFFFLKWQKNFNQKTSFMLFLLLILIESDKALANILLTLMRNS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IIETHAFLVSFVGKSNYFGVFGIYVYLIFITFLAFLSLKIRKKNISKKQILDINYRKNEA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCHH KTSLINRYFSSVFISCVISFCIILYFFMVSSKPLTIDEPKEILPDKNGKFIFDIALLRDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEEEECCC KLHRFAYISAEGKVIRFFLINKREDRDSPVAVFDACMICGDMGYIKKDGQLICISCNVRI CEEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEECCCEEEEEEECEEE FLPSVGKSGGCNPIPLKYEYDGKKITIDVKDVIAGSNYFSQIKEIEVQDPVSKTKVINTQ EEECCCCCCCCCCCCEEEEECCCEEEEEHHHHHCCCHHHHHHHHCCCCCCCCHHEEEECC APFSYSYKGITYYFSNQNNYEEFKKDPTKHVEENEAQFLIQRRNDVG CCCCCCCCCEEEEECCCCCHHHHHCCCHHHHCCCHHHHHHHHCCCCC >Mature Secondary Structure SIYFVHFLISVLPLSILMAFIASDKKYIFKSFLVVFLGFLFGYFAFFIAAQFLKTENLI EEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE FNFDFVFIGLLLVSFIFYFWKKIEILNFILLGILSFCTALHYYFLSQDFPIFTSSLIDSE EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC GISSLGFIALALLVCILIFFFLKWQKNFNQKTSFMLFLLLILIESDKALANILLTLMRNS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IIETHAFLVSFVGKSNYFGVFGIYVYLIFITFLAFLSLKIRKKNISKKQILDINYRKNEA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCHH KTSLINRYFSSVFISCVISFCIILYFFMVSSKPLTIDEPKEILPDKNGKFIFDIALLRDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEEEECCC KLHRFAYISAEGKVIRFFLINKREDRDSPVAVFDACMICGDMGYIKKDGQLICISCNVRI CEEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEECCCEEEEEEECEEE FLPSVGKSGGCNPIPLKYEYDGKKITIDVKDVIAGSNYFSQIKEIEVQDPVSKTKVINTQ EEECCCCCCCCCCCCEEEEECCCEEEEEHHHHHCCCHHHHHHHHCCCCCCCCHHEEEECC APFSYSYKGITYYFSNQNNYEEFKKDPTKHVEENEAQFLIQRRNDVG CCCCCCCCCEEEEECCCCCHHHHHCCCHHHHCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA