| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238670
Identifier: 57238670
GI number: 57238670
Start: 1724263
End: 1724802
Strand: Direct
Name: 57238670
Synonym: CJE1831
Alternate gene names: NA
Gene position: 1724263-1724802 (Clockwise)
Preceding gene: 57238669
Following gene: 57238671
Centisome position: 96.99
GC content: 37.04
Gene sequence:
>540_bases ATGATAAAAAAAGTTTTATCAGTAGTTGCTGCAGCTGCGGTTATTAGTACAAATTTATTTGCAGGCGAAGTGCCAATCGG CGATCCAAAAGAACTTAATGGTATGGAAATAGCCGCTGTTTATTTACAACCTATTGAAATGGAGCCAAGAGGTATTGATC TAGCTGCGTCTTTAGCAGATATTCATCTAGAAGCTGACATTCACGCACTTAAAAACAATCCAAATGGTTTTCCAGAAGGT TTTTGGATGCCTTATTTAACTATAGCTTATGAACTTAAAAATACCGACACAGGTGCAATTAAACGCGGAACTTTGATGCC TATGGTGGCTGATGATGGTCCTCACTATGGTGCAAATATTGCTATGGAAAAAGATAAAAAAGGTGGCTTTGGCGTAGGAA ATTATGAACTTACTTTTTATATCTCAAATCCAGAAAAACAAGGTTTTGGACGCCATGTTGATGAAGAAACAGGCGTGGGT AAGTGGTTTGAACCTTTTAAAGTAGATTATAAATTCAAATACACAGGTACGCCAAAATGA
Upstream 100 bases:
>100_bases ATCCTTACTATGAAACTTTAATCCCTCAATTTATAGTTTTGACAATGTTAATTATTGGCATTTTGATAACAAAACAAATT TCAAAAAAAGGAGTAAAATC
Downstream 100 bases:
>100_bases TTTTACACTCGGATTTTCCGAGTGTTTAAATATTTTTATTTTTATTTGAAAAATTAAAATAACAATGTTTAAAGAGTAAA TTATGAGTATATATTTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MIKKVLSVVAAAAVISTNLFAGEVPIGDPKELNGMEIAAVYLQPIEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEG FWMPYLTIAYELKNTDTGAIKRGTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVG KWFEPFKVDYKFKYTGTPK
Sequences:
>Translated_179_residues MIKKVLSVVAAAAVISTNLFAGEVPIGDPKELNGMEIAAVYLQPIEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEG FWMPYLTIAYELKNTDTGAIKRGTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVG KWFEPFKVDYKFKYTGTPK >Mature_179_residues MIKKVLSVVAAAAVISTNLFAGEVPIGDPKELNGMEIAAVYLQPIEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEG FWMPYLTIAYELKNTDTGAIKRGTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVG KWFEPFKVDYKFKYTGTPK
Specific function: Unknown
COG id: COG3470
COG function: function code P; Uncharacterized protein probably involved in high-affinity Fe2+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0423 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018470 [H]
Pfam domain/function: PF10634 Iron_transport [H]
EC number: NA
Molecular weight: Translated: 19643; Mature: 19643
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKVLSVVAAAAVISTNLFAGEVPIGDPKELNGMEIAAVYLQPIEMEPRGIDLAASLAD CHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEEE IHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKRGTLMPMVADDGPHYGANI EEEECEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCEECCEEEEEEECCCCCCCCEE AMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVGKWFEPFKVDYKFKYTGTPK EEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC >Mature Secondary Structure MIKKVLSVVAAAAVISTNLFAGEVPIGDPKELNGMEIAAVYLQPIEMEPRGIDLAASLAD CHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEEE IHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKRGTLMPMVADDGPHYGANI EEEECEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCEECCEEEEEEECCCCCCCCEE AMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVGKWFEPFKVDYKFKYTGTPK EEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12271122 [H]