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The map label for this gene is nlpC [C]

Identifier: 57238664

GI number: 57238664

Start: 1718152

End: 1718610

Strand: Reverse

Name: nlpC [C]

Synonym: CJE1825

Alternate gene names: 57238664

Gene position: 1718610-1718152 (Counterclockwise)

Preceding gene: 57238665

Following gene: 57238663

Centisome position: 96.67

GC content: 32.9

Gene sequence:

>459_bases
ATGAGGCATATTTTTTTTATTATTACGATTATATTTTTTATAAGTGGATGTAGTTTTTATCAGAATCTAAACTATCGTCC
TAGTTACAACACAAATAAAGAAGCAAGGCTCAAGGTTATTGCAAATGAATGGAAAAAAACCCCTTATGTTTTAGGTGGAA
CTAGTAAAAAAGGTGCTGATTGTTCAGGATTTACACAGAGCGCATTAGCTCAGCTTAATATACGCATACCTCGCACTACA
AAAACTCAATTAGGTTCTGGAAGAAAAGTTTCTAAATCAAAATTGCAAACAGGAGATTTGGTATTTTTTAAGACAGGTAG
AGGGCCAAATGGTATGCATGTTGGTATTTATATGAGCAAGGGAAAATTTATACATTTATCTACTAAAGGTGGAGTAAAAG
AAGTCGAGCTAAATAGTTCTTATTGGAAGGCTCGTTATATAGGAGCAAGAAGGTATTAA

Upstream 100 bases:

>100_bases
ATTATGCAGATAACTTAGCTATTCTTATAGCCTCATTTTGTTCTGGGATTTGGGGTTTTATTTATCTTAAATTCTTTACT
ACTCGATCTTAAGGGGATTG

Downstream 100 bases:

>100_bases
AGTGAAAATAGGTGTATTTGATAGCGGGGTAGGGGGGCTTAGCGTTTTAAAATCTCTTTATGAAGCTAGACTTTTTGATG
AAATTATCTATTATGGAGAT

Product: lipoprotein NlpC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MRHIFFIITIIFFISGCSFYQNLNYRPSYNTNKEARLKVIANEWKKTPYVLGGTSKKGADCSGFTQSALAQLNIRIPRTT
KTQLGSGRKVSKSKLQTGDLVFFKTGRGPNGMHVGIYMSKGKFIHLSTKGGVKEVELNSSYWKARYIGARRY

Sequences:

>Translated_152_residues
MRHIFFIITIIFFISGCSFYQNLNYRPSYNTNKEARLKVIANEWKKTPYVLGGTSKKGADCSGFTQSALAQLNIRIPRTT
KTQLGSGRKVSKSKLQTGDLVFFKTGRGPNGMHVGIYMSKGKFIHLSTKGGVKEVELNSSYWKARYIGARRY
>Mature_152_residues
MRHIFFIITIIFFISGCSFYQNLNYRPSYNTNKEARLKVIANEWKKTPYVLGGTSKKGADCSGFTQSALAQLNIRIPRTT
KTQLGSGRKVSKSKLQTGDLVFFKTGRGPNGMHVGIYMSKGKFIHLSTKGGVKEVELNSSYWKARYIGARRY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788001, Length=143, Percent_Identity=40.5594405594406, Blast_Score=110, Evalue=4e-26,
Organism=Escherichia coli, GI1788501, Length=123, Percent_Identity=44.7154471544715, Blast_Score=106, Evalue=7e-25,
Organism=Escherichia coli, GI1787944, Length=110, Percent_Identity=43.6363636363636, Blast_Score=76, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 17171; Mature: 17171

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHIFFIITIIFFISGCSFYQNLNYRPSYNTNKEARLKVIANEWKKTPYVLGGTSKKGAD
CCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCC
CSGFTQSALAQLNIRIPRTTKTQLGSGRKVSKSKLQTGDLVFFKTGRGPNGMHVGIYMSK
CCCCCHHHHEEEEEECCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECC
GKFIHLSTKGGVKEVELNSSYWKARYIGARRY
CEEEEEECCCCEEEEEECCCEEEEEEEEECCC
>Mature Secondary Structure
MRHIFFIITIIFFISGCSFYQNLNYRPSYNTNKEARLKVIANEWKKTPYVLGGTSKKGAD
CCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCC
CSGFTQSALAQLNIRIPRTTKTQLGSGRKVSKSKLQTGDLVFFKTGRGPNGMHVGIYMSK
CCCCCHHHHEEEEEECCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECC
GKFIHLSTKGGVKEVELNSSYWKARYIGARRY
CEEEEEECCCCEEEEEECCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]