| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is murI [H]
Identifier: 57238663
GI number: 57238663
Start: 1717407
End: 1718150
Strand: Reverse
Name: murI [H]
Synonym: CJE1824
Alternate gene names: 57238663
Gene position: 1718150-1717407 (Counterclockwise)
Preceding gene: 57238664
Following gene: 57238662
Centisome position: 96.64
GC content: 30.78
Gene sequence:
>744_bases GTGAAAATAGGTGTATTTGATAGCGGGGTAGGGGGGCTTAGCGTTTTAAAATCTCTTTATGAAGCTAGACTTTTTGATGA AATTATCTATTATGGAGATACCGCAAGAGTTCCTTATGGAGTAAAAGATAAAGATACTATTATAAAGTTCTGTCTTGAAG CATTGGAATTTTTTGAACAATTTCAAATTGATATGCTTATCATTGCATGTAATACTGCTAGTGCTTATGCTTTAGATGCT TTAAGGACAAAAGCACATTTTCCAGTATATGGTGTAATTGATGCAGGGGTTGAAGCAACGATAAAAGCTTTGCATGATAA AAATAAAGAAATTTTAGTCATTGCAACAAAAGCAACCATTAAATCAGAAGAATACCAAAAGCGTTTATTATCCCAAGGAT ATACAAATATAAATGCTTTAGCTACAGGGCTTTTTGTGCCTATGGTTGAAGAAGGTATTTTTGAAGGAGATTTTTTGCAA AGTGCTATGGAGTATTATTTTAAAAATATCACAACTCCAGATGCTTTGATACTCGCTTGCACTCATTTCCCTTTACTAGG TCGTTCTTTAAGTAAGTATTTTGGTGATAAAACAAAATTAATTCATTCAGGAGATGCTATAGTTGAATTTCTTAAAGAAA GAGAAAATATAGATTTGAAAAATCATAAAGCAAAATTACATTTTTATGCTTCAAGCGATGTTGAATCTTTAAAAAATACT GCTAAAATTTGGCTAAATTTATAA
Upstream 100 bases:
>100_bases GGAAAATTTATACATTTATCTACTAAAGGTGGAGTAAAAGAAGTCGAGCTAAATAGTTCTTATTGGAAGGCTCGTTATAT AGGAGCAAGAAGGTATTAAA
Downstream 100 bases:
>100_bases GGAAATAAAATGATAGAATTGAAAAAACCAGATGAAATAGAAAAATTAAGAATAGCAAATCAAATTGTAGCAAAAACTTT AAATTTTTTAGAGAATGAAA
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALEFFEQFQIDMLIIACNTASAYALDA LRTKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQ SAMEYYFKNITTPDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKERENIDLKNHKAKLHFYASSDVESLKNT AKIWLNL
Sequences:
>Translated_247_residues MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALEFFEQFQIDMLIIACNTASAYALDA LRTKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQ SAMEYYFKNITTPDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKERENIDLKNHKAKLHFYASSDVESLKNT AKIWLNL >Mature_247_residues MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALEFFEQFQIDMLIIACNTASAYALDA LRTKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQ SAMEYYFKNITTPDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKERENIDLKNHKAKLHFYASSDVESLKNT AKIWLNL
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=234, Percent_Identity=32.4786324786325, Blast_Score=96, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 27730; Mature: 27730
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALEFFEQ CEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FQIDMLIIACNTASAYALDALRTKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATI HCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCHH KSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITTPDALILAC CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHH THFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKERENIDLKNHKAKLHFYASSDVESLKNT HHHHHHHHHHHHHCCCHHEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHH AKIWLNL HHHEECC >Mature Secondary Structure MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALEFFEQ CEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FQIDMLIIACNTASAYALDALRTKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATI HCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCHH KSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITTPDALILAC CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHH THFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKERENIDLKNHKAKLHFYASSDVESLKNT HHHHHHHHHHHHHCCCHHEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHH AKIWLNL HHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]