| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238642
Identifier: 57238642
GI number: 57238642
Start: 1698701
End: 1699579
Strand: Reverse
Name: 57238642
Synonym: CJE1803
Alternate gene names: NA
Gene position: 1699579-1698701 (Counterclockwise)
Preceding gene: 57238643
Following gene: 57238639
Centisome position: 95.6
GC content: 27.53
Gene sequence:
>879_bases ATGGATAAATTAACAATCAATGATTTTAATGTTTCTTTACCAAGTTCTCAAAATGTTACAAATCGTAAAGAAATTTTAGA ATTAAAAAAAGAAGAGAAAGATAAAATTCCCGTGCAAGATCTTTCGAGTTTAAATAGCGATGGTGTTAAGGTTGTTTTTG AAAATAAGCAAGGTGAACTTATAGCTTTAAATTTAAGCGATGAAAATTATAGTAGTTTACAAAAAAATTTCGGTTCTTAT ACGAATTATGTTGCTAGAAATGATGGTAGTATAAGGCTTAATGGCGAAGCAAATCAATTTGTTTCAAATTGGTTTGAAAG TGTAAAAGATAATTTTGGTTCTTTAAATTCAAATTTAAATAATAAACAACAAAGTGTAAAATTAAATTTTAATACAAATA CCCTTCAACAAAGTATGCAAAATTTAGGCTTTAAAACAAGCGATGAAAAAATATCTGATGATGCAAATATAGAAGAAAAA TTAAATTTTTTTATTGATAAAGATGTAAATAAAGATGGTAAAGTTGATGATAGTGATGTTAAAGAACCTAGCATGAGAGA AATTTTAAGCGACATTAAAGAAGCATCAGGTGGTGGAGCTAATGCTATGAAAACCATAGATCCGCAAAAAATCAATAAAA AAGATGATAAGGAAAATAATATCAAAGAAAAAGAAGACGAAGATTTGCTTCAAAAAGCTCAAGAAAAAGGTTTAAGTGCT TTAAGTGCTGATGAGCAGGCAAAGCTTGAGGCTAGCAATCCTGAAGAATTTGAAAAACTGAAGCAAAAATCTTTGCAAGA ATTAAGTCAGAATTTAAGTAAAGATTTTCAAAATAAAATTGAAAATCAAGAAGCACAAATTGTAGATAAGAGAGTGTAG
Upstream 100 bases:
>100_bases ATCAAAGACAAATGTGTCGTTTGGGCTTATTTGCAGCTTGTAAATAAAATAAACAAGTCCAAGTTAAATGCTTGGGCTTT AAAATTTCTAAGGAGTTATT
Downstream 100 bases:
>100_bases CAAATTATAATTTTATCCTCTTAGGGTTTTAAAATCATATATAATAGGTAGTGTAATTCTTAAATCCCCGTTATAGTATG GAAAATTTAAAGAAGCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MDKLTINDFNVSLPSSQNVTNRKEILELKKEEKDKIPVQDLSSLNSDGVKVVFENKQGELIALNLSDENYSSLQKNFGSY TNYVARNDGSIRLNGEANQFVSNWFESVKDNFGSLNSNLNNKQQSVKLNFNTNTLQQSMQNLGFKTSDEKISDDANIEEK LNFFIDKDVNKDGKVDDSDVKEPSMREILSDIKEASGGGANAMKTIDPQKINKKDDKENNIKEKEDEDLLQKAQEKGLSA LSADEQAKLEASNPEEFEKLKQKSLQELSQNLSKDFQNKIENQEAQIVDKRV
Sequences:
>Translated_292_residues MDKLTINDFNVSLPSSQNVTNRKEILELKKEEKDKIPVQDLSSLNSDGVKVVFENKQGELIALNLSDENYSSLQKNFGSY TNYVARNDGSIRLNGEANQFVSNWFESVKDNFGSLNSNLNNKQQSVKLNFNTNTLQQSMQNLGFKTSDEKISDDANIEEK LNFFIDKDVNKDGKVDDSDVKEPSMREILSDIKEASGGGANAMKTIDPQKINKKDDKENNIKEKEDEDLLQKAQEKGLSA LSADEQAKLEASNPEEFEKLKQKSLQELSQNLSKDFQNKIENQEAQIVDKRV >Mature_292_residues MDKLTINDFNVSLPSSQNVTNRKEILELKKEEKDKIPVQDLSSLNSDGVKVVFENKQGELIALNLSDENYSSLQKNFGSY TNYVARNDGSIRLNGEANQFVSNWFESVKDNFGSLNSNLNNKQQSVKLNFNTNTLQQSMQNLGFKTSDEKISDDANIEEK LNFFIDKDVNKDGKVDDSDVKEPSMREILSDIKEASGGGANAMKTIDPQKINKKDDKENNIKEKEDEDLLQKAQEKGLSA LSADEQAKLEASNPEEFEKLKQKSLQELSQNLSKDFQNKIENQEAQIVDKRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32997; Mature: 32997
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLTINDFNVSLPSSQNVTNRKEILELKKEEKDKIPVQDLSSLNSDGVKVVFENKQGEL CCCEEECCCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCE IALNLSDENYSSLQKNFGSYTNYVARNDGSIRLNGEANQFVSNWFESVKDNFGSLNSNLN EEEEECCCHHHHHHHHHHHHHHHEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCC NKQQSVKLNFNTNTLQQSMQNLGFKTSDEKISDDANIEEKLNFFIDKDVNKDGKVDDSDV CCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC KEPSMREILSDIKEASGGGANAMKTIDPQKINKKDDKENNIKEKEDEDLLQKAQEKGLSA CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHH LSADEQAKLEASNPEEFEKLKQKSLQELSQNLSKDFQNKIENQEAQIVDKRV HCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure MDKLTINDFNVSLPSSQNVTNRKEILELKKEEKDKIPVQDLSSLNSDGVKVVFENKQGEL CCCEEECCCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCE IALNLSDENYSSLQKNFGSYTNYVARNDGSIRLNGEANQFVSNWFESVKDNFGSLNSNLN EEEEECCCHHHHHHHHHHHHHHHEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCC NKQQSVKLNFNTNTLQQSMQNLGFKTSDEKISDDANIEEKLNFFIDKDVNKDGKVDDSDV CCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC KEPSMREILSDIKEASGGGANAMKTIDPQKINKKDDKENNIKEKEDEDLLQKAQEKGLSA CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHH LSADEQAKLEASNPEEFEKLKQKSLQELSQNLSKDFQNKIENQEAQIVDKRV HCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA