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The map label for this gene is xp55 [H]

Identifier: 57238597

GI number: 57238597

Start: 1654165

End: 1655700

Strand: Reverse

Name: xp55 [H]

Synonym: CJE1755

Alternate gene names: 57238597

Gene position: 1655700-1654165 (Counterclockwise)

Preceding gene: 57238598

Following gene: 57238596

Centisome position: 93.13

GC content: 30.92

Gene sequence:

>1536_bases
GTGCTTAGATGGTTTATTTTACTATTTTTATTGTTTTTCAATGTTGAGGCTAAAATTCCAAAAGATACTTTAATCGTAGC
TGTGGAAAATGAAATTTCAAGGATAAATCCTGCATATAGCGAAGATCATGATGCGGTGATTAATCTTGTATTTTCAGGAC
TTACGCGTTTTGATGAGCATATGAGCTTAAAGCCTGATTTAGCTGCGTCGTGGAATGTTAGCAAGGATGGACTTAGCTAT
GATATCTTTTTGCGTGAAGATGTTTTGTGGCACGATGGAGTGAAATTTAGTGCCGATGATGTTAAATTCAGTCTTGAAGC
TTTTAAAAATCCTAAAAATAATTCTTCTATTTATGTGAATTTTGAAGATATTAAAAGTATAGAAATTTTAAATCCTTATC
ATCTTAAAATCACGCTTTCTAAACCTTTTCCTGCATTTTTAGATGCTTTAAGTATAGGAATGCTTCCTAAACATTTACTT
AGTGATAAAGACTTAAATACTGCTTCTTTTAATCAAAATCCCATAGGCACAGGTCCTTATAAATTTGTAAAATGGAAAAA
GGGCGAATATGTAGAGTTTAAAGCTAATGAGAATTTTTATCTTACAAAAGTAAAAACCCCAAGACTTATCATCAAACATA
TTTTTGATCCTTCGGTTGCAAGCGTAGAGCTTAAAAATGGCAAAATTGATGCGGCTTTGATTGATGTTTCTTTATTGAAT
ATTTTTAAAAAGGATGAAAATTTTAAAATTTTGCGTGAAAGATCTGCTGATTATAGAGCTTTAATGTTTAATTTAGAGAA
TGAATTTTTAAAAGATATTCAAATAAGAAAGGCTTTAAATTATGCTGTTGATAAGCAAAGTATAGTCAAAAATCTTTTGC
ATGATTATGGTTTTGTAGCCAATCATCCTTTAGAGCGTTCTTGGGCGGATTCTAAAGCTTTTAAAACTTATGAATACAAT
CCTAAAAAAGCCCAAGATTTGATTTTGGCTTTAGGTTTTAAGAAAAACGATGAGGGTATTTTTGAAAAAGATGGCAAGAT
TTTAGAATTTGAAATTTGGGCGATGAGTAATGATCCTTTAAGGGTAAGTTTGGCTGGAATTTTGCAAAGCGAATTTAGAA
AAATAGGAGTTGTAAGCAAGGTGGTGGCTAAACCTGCTGGAAGTTTTGATTATTCTAAAGTAGATAGTTTTTTAATAGGC
TGGGGAAGTCCTTTAGATCCTGATTTTCACACTTTTAGGGTATTTGAAAGTTCGCAAGATAGTGCTTTAAATGATGAGGG
TTGGAATTTTGGACATTATCATGATAAAAAAGTGGATATAGCCTTGCAAAAAGCAAGAAATACTTCAAAATTAGAAGAGA
GAAAAAAATATTATAAAGATTTTATAGATGCTTTGTATGAAAATCCCCCTTTTATTTTTTTAGCTTATCTTGATTTTGCT
TTAGTTTATAATAAAGATTTAAAAGGTATCAAAGCAAGGACTTTAGGTCATCACGGAGTGGGTTTTACTTGGAATGTTTA
TGAGTGGAGTAAATAG

Upstream 100 bases:

>100_bases
TAAAACTCCATAATTTAAAGCAAATTATCCCCCTATAGGGCTTGTGGCTTCTTATTTTTTATTTTATAATTTTTTTAATT
TTAAATTTGAGGAGTTACAA

Downstream 100 bases:

>100_bases
TGCTAAAACGCTTAGTTTTTAGTATTTTCATAGCATTTTTTAGCACTTTTTTATGTTTTGTTTTACTTTATTTTAGTAAA
GGTAGTATAGCTTATGCTAA

Product: peptide ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MLRWFILLFLLFFNVEAKIPKDTLIVAVENEISRINPAYSEDHDAVINLVFSGLTRFDEHMSLKPDLAASWNVSKDGLSY
DIFLREDVLWHDGVKFSADDVKFSLEAFKNPKNNSSIYVNFEDIKSIEILNPYHLKITLSKPFPAFLDALSIGMLPKHLL
SDKDLNTASFNQNPIGTGPYKFVKWKKGEYVEFKANENFYLTKVKTPRLIIKHIFDPSVASVELKNGKIDAALIDVSLLN
IFKKDENFKILRERSADYRALMFNLENEFLKDIQIRKALNYAVDKQSIVKNLLHDYGFVANHPLERSWADSKAFKTYEYN
PKKAQDLILALGFKKNDEGIFEKDGKILEFEIWAMSNDPLRVSLAGILQSEFRKIGVVSKVVAKPAGSFDYSKVDSFLIG
WGSPLDPDFHTFRVFESSQDSALNDEGWNFGHYHDKKVDIALQKARNTSKLEERKKYYKDFIDALYENPPFIFLAYLDFA
LVYNKDLKGIKARTLGHHGVGFTWNVYEWSK

Sequences:

>Translated_511_residues
MLRWFILLFLLFFNVEAKIPKDTLIVAVENEISRINPAYSEDHDAVINLVFSGLTRFDEHMSLKPDLAASWNVSKDGLSY
DIFLREDVLWHDGVKFSADDVKFSLEAFKNPKNNSSIYVNFEDIKSIEILNPYHLKITLSKPFPAFLDALSIGMLPKHLL
SDKDLNTASFNQNPIGTGPYKFVKWKKGEYVEFKANENFYLTKVKTPRLIIKHIFDPSVASVELKNGKIDAALIDVSLLN
IFKKDENFKILRERSADYRALMFNLENEFLKDIQIRKALNYAVDKQSIVKNLLHDYGFVANHPLERSWADSKAFKTYEYN
PKKAQDLILALGFKKNDEGIFEKDGKILEFEIWAMSNDPLRVSLAGILQSEFRKIGVVSKVVAKPAGSFDYSKVDSFLIG
WGSPLDPDFHTFRVFESSQDSALNDEGWNFGHYHDKKVDIALQKARNTSKLEERKKYYKDFIDALYENPPFIFLAYLDFA
LVYNKDLKGIKARTLGHHGVGFTWNVYEWSK
>Mature_511_residues
MLRWFILLFLLFFNVEAKIPKDTLIVAVENEISRINPAYSEDHDAVINLVFSGLTRFDEHMSLKPDLAASWNVSKDGLSY
DIFLREDVLWHDGVKFSADDVKFSLEAFKNPKNNSSIYVNFEDIKSIEILNPYHLKITLSKPFPAFLDALSIGMLPKHLL
SDKDLNTASFNQNPIGTGPYKFVKWKKGEYVEFKANENFYLTKVKTPRLIIKHIFDPSVASVELKNGKIDAALIDVSLLN
IFKKDENFKILRERSADYRALMFNLENEFLKDIQIRKALNYAVDKQSIVKNLLHDYGFVANHPLERSWADSKAFKTYEYN
PKKAQDLILALGFKKNDEGIFEKDGKILEFEIWAMSNDPLRVSLAGILQSEFRKIGVVSKVVAKPAGSFDYSKVDSFLIG
WGSPLDPDFHTFRVFESSQDSALNDEGWNFGHYHDKKVDIALQKARNTSKLEERKKYYKDFIDALYENPPFIFLAYLDFA
LVYNKDLKGIKARTLGHHGVGFTWNVYEWSK

Specific function: Required for transport of an unidentified substrate [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=488, Percent_Identity=25.2049180327869, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1789966, Length=529, Percent_Identity=24.952741020794, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1789887, Length=501, Percent_Identity=24.9500998003992, Blast_Score=144, Evalue=2e-35,
Organism=Escherichia coli, GI1787551, Length=524, Percent_Identity=23.6641221374046, Blast_Score=115, Evalue=8e-27,
Organism=Escherichia coli, GI1787762, Length=510, Percent_Identity=23.7254901960784, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1789397, Length=324, Percent_Identity=21.2962962962963, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58889; Mature: 58889

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRWFILLFLLFFNVEAKIPKDTLIVAVENEISRINPAYSEDHDAVINLVFSGLTRFDEH
CHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
MSLKPDLAASWNVSKDGLSYDIFLREDVLWHDGVKFSADDVKFSLEAFKNPKNNSSIYVN
CCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCEECCCCCEEEHHHHCCCCCCCEEEEE
FEDIKSIEILNPYHLKITLSKPFPAFLDALSIGMLPKHLLSDKDLNTASFNQNPIGTGPY
EHHCCEEEEECCEEEEEEECCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCC
KFVKWKKGEYVEFKANENFYLTKVKTPRLIIKHIFDPSVASVELKNGKIDAALIDVSLLN
EEEEECCCCEEEEECCCCEEEEEECCHHHHHHHHCCCCCEEEEECCCCEEEEEHHHHHHH
IFKKDENFKILRERSADYRALMFNLENEFLKDIQIRKALNYAVDKQSIVKNLLHDYGFVA
HHHCCCCCHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
NHPLERSWADSKAFKTYEYNPKKAQDLILALGFKKNDEGIFEKDGKILEFEIWAMSNDPL
CCCCCCCCCCCCCCEEECCCCCHHHEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCE
RVSLAGILQSEFRKIGVVSKVVAKPAGSFDYSKVDSFLIGWGSPLDPDFHTFRVFESSQD
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEECCCCCCCCCEEEEEEECCCC
SALNDEGWNFGHYHDKKVDIALQKARNTSKLEERKKYYKDFIDALYENPPFIFLAYLDFA
CCCCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH
LVYNKDLKGIKARTLGHHGVGFTWNVYEWSK
HHCCCCCCCCEEEECCCCCCCEEEEEEECCC
>Mature Secondary Structure
MLRWFILLFLLFFNVEAKIPKDTLIVAVENEISRINPAYSEDHDAVINLVFSGLTRFDEH
CHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
MSLKPDLAASWNVSKDGLSYDIFLREDVLWHDGVKFSADDVKFSLEAFKNPKNNSSIYVN
CCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCEECCCCCEEEHHHHCCCCCCCEEEEE
FEDIKSIEILNPYHLKITLSKPFPAFLDALSIGMLPKHLLSDKDLNTASFNQNPIGTGPY
EHHCCEEEEECCEEEEEEECCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCC
KFVKWKKGEYVEFKANENFYLTKVKTPRLIIKHIFDPSVASVELKNGKIDAALIDVSLLN
EEEEECCCCEEEEECCCCEEEEEECCHHHHHHHHCCCCCEEEEECCCCEEEEEHHHHHHH
IFKKDENFKILRERSADYRALMFNLENEFLKDIQIRKALNYAVDKQSIVKNLLHDYGFVA
HHHCCCCCHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
NHPLERSWADSKAFKTYEYNPKKAQDLILALGFKKNDEGIFEKDGKILEFEIWAMSNDPL
CCCCCCCCCCCCCCEEECCCCCHHHEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCE
RVSLAGILQSEFRKIGVVSKVVAKPAGSFDYSKVDSFLIGWGSPLDPDFHTFRVFESSQD
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEECCCCCCCCCEEEEEEECCCC
SALNDEGWNFGHYHDKKVDIALQKARNTSKLEERKKYYKDFIDALYENPPFIFLAYLDFA
CCCCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH
LVYNKDLKGIKARTLGHHGVGFTWNVYEWSK
HHCCCCCCCCEEEECCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]