| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238587
Identifier: 57238587
GI number: 57238587
Start: 1647156
End: 1647848
Strand: Reverse
Name: 57238587
Synonym: CJE1745
Alternate gene names: NA
Gene position: 1647848-1647156 (Counterclockwise)
Preceding gene: 57238588
Following gene: 57238586
Centisome position: 92.69
GC content: 26.98
Gene sequence:
>693_bases ATGATTTATGATAATGCTCTTTGTTTTTTAGATATGCCAAGCCTTAAAAACAAAAATTTATGTGAAAAAATAGGTGTAAA TAGCATTAATATTTCTTGTTTGGAAGATAAAAACTTAAAAGCTAAATTTTACAAATGCGAAATTGCAAGTTTGAGTTTTG TTTTGGCCTTGCTTTGTAAATTAAGCGATGAAGGACAATTTTGCGATTTAGATGAGGGATATTTAAGTGCTGAATCTTGT TTTGGAGAGGAAGAAGCAGGCGAAGTGCTTGCTTTTTTAAAAGAGGTTAAGTATTTAATTATAGATAAAAATATCCATTC TTATAAAGATAGTGAAAATATCAAATATTTTTTGAATTTCCTAAGTGTAAAATATGGATTAAAGATTTTAGATAGCGATG AAGAAGAATGCGATTTTAAAAAGGCAAAATTAAACACCCTAAAAGAACTCGATAATTATAACGGGTTAGTGCTTTTTAGA GCAAATTTGCAAGATAAAAATTTACATTGTTCAAAGCAATTTTTACAAATTGCAAAATGCAAAGATCAAAGTGAAGTTGA AATTTTAGCTAAAGATTTTAGTTTTAAAACTAAGCTTTGTTTAGATGAAAATTTACAAGGCACCATAGCTTTTTTAAATT ATGAAAATAATGGTTTTGATTTTACTCCAATTCGCATAAAGGAAGCAAAATGA
Upstream 100 bases:
>100_bases AAAAAAGTTTTTCTTTTGTAAAAGAACAAGGCTGTGAGCTTTTAAATTCTTTGAAATTTAATCAAGTCGATTGGACTATT GTTATAAAAAAGGAGAGGGT
Downstream 100 bases:
>100_bases CAGTTAAGATTAATGGTATAGATTGCGCCTTTGAAGAAGGCGAATATATCTTAAATATAGCAAGAAGAAATGATATTTTT ATCCCAGCGATTTGCTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MIYDNALCFLDMPSLKNKNLCEKIGVNSINISCLEDKNLKAKFYKCEIASLSFVLALLCKLSDEGQFCDLDEGYLSAESC FGEEEAGEVLAFLKEVKYLIIDKNIHSYKDSENIKYFLNFLSVKYGLKILDSDEEECDFKKAKLNTLKELDNYNGLVLFR ANLQDKNLHCSKQFLQIAKCKDQSEVEILAKDFSFKTKLCLDENLQGTIAFLNYENNGFDFTPIRIKEAK
Sequences:
>Translated_230_residues MIYDNALCFLDMPSLKNKNLCEKIGVNSINISCLEDKNLKAKFYKCEIASLSFVLALLCKLSDEGQFCDLDEGYLSAESC FGEEEAGEVLAFLKEVKYLIIDKNIHSYKDSENIKYFLNFLSVKYGLKILDSDEEECDFKKAKLNTLKELDNYNGLVLFR ANLQDKNLHCSKQFLQIAKCKDQSEVEILAKDFSFKTKLCLDENLQGTIAFLNYENNGFDFTPIRIKEAK >Mature_230_residues MIYDNALCFLDMPSLKNKNLCEKIGVNSINISCLEDKNLKAKFYKCEIASLSFVLALLCKLSDEGQFCDLDEGYLSAESC FGEEEAGEVLAFLKEVKYLIIDKNIHSYKDSENIKYFLNFLSVKYGLKILDSDEEECDFKKAKLNTLKELDNYNGLVLFR ANLQDKNLHCSKQFLQIAKCKDQSEVEILAKDFSFKTKLCLDENLQGTIAFLNYENNGFDFTPIRIKEAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26373; Mature: 26373
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYDNALCFLDMPSLKNKNLCEKIGVNSINISCLEDKNLKAKFYKCEIASLSFVLALLCK CEECCEEEEEECCCCCCCCHHHHHCCCEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHH LSDEGQFCDLDEGYLSAESCFGEEEAGEVLAFLKEVKYLIIDKNIHSYKDSENIKYFLNF CCCCCCEECCCCCCCCHHHHCCCHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHH LSVKYGLKILDSDEEECDFKKAKLNTLKELDNYNGLVLFRANLQDKNLHCSKQFLQIAKC HHHHHCCEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHC KDQSEVEILAKDFSFKTKLCLDENLQGTIAFLNYENNGFDFTPIRIKEAK CCCCCEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCEEECEEEEECCC >Mature Secondary Structure MIYDNALCFLDMPSLKNKNLCEKIGVNSINISCLEDKNLKAKFYKCEIASLSFVLALLCK CEECCEEEEEECCCCCCCCHHHHHCCCEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHH LSDEGQFCDLDEGYLSAESCFGEEEAGEVLAFLKEVKYLIIDKNIHSYKDSENIKYFLNF CCCCCCEECCCCCCCCHHHHCCCHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHH LSVKYGLKILDSDEEECDFKKAKLNTLKELDNYNGLVLFRANLQDKNLHCSKQFLQIAKC HHHHHCCEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHC KDQSEVEILAKDFSFKTKLCLDENLQGTIAFLNYENNGFDFTPIRIKEAK CCCCCEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCEEECEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA