| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is pflA
Identifier: 57238578
GI number: 57238578
Start: 1635200
End: 1637566
Strand: Reverse
Name: pflA
Synonym: CJE1736
Alternate gene names: NA
Gene position: 1637566-1635200 (Counterclockwise)
Preceding gene: 57238579
Following gene: 57238572
Centisome position: 92.11
GC content: 27.0
Gene sequence:
>2367_bases ATGAGAATATTATTTTTAATTTTATTAAGTTTTTTAAATGCTTTTGCTTTTGAGCTTGTTTTAAACACGGGTCGCGAAAA TAATCAAGCTTTTGCAGTTTTACATGCGAGTAATGATTTAGAATTTACATGTCAAAAATTTATTACCGAAGCAAAAGTTC ATTTTGAATGTGATATTGCAGGTATGGTTGATAATAAATTAAAAGATCAGAGTTTTTCTGCTTTTGATTTAAAATTTATA CAAGAAGCTCAAAAAATTAAAATGATCATTTTGCCAAAAATACAAGCAAGAATGTTTGACACTTCTCAAAATATTTATAT AGATAAAGAACTCAGTTCATCAAGTTCGCATAAAAGTAAGGCTTTTACTTTTATTTTTACACCAGAACTAGCACCTATTA AAGACTATGATGGACTCGATTTTAATATCAATTTTCCACATGAGAGTTTGCCTTATGTTGGAGCTTTGGATTTAAATTCT GATCCTGTTGTTATTCCTCAAAGTGCAGATATCAATACTTATTTACGCATCAAAAAAGAATACGATAAGGCTAATTACAA TCAAGTGGTGATTGATGCACAAAATGCTATCAATAGATATCGTGGCAGTATTTTTACTAGTGAATTTATACTTTATAAAT TAAGAGCTCAAAATAAACTTTACACTCAAGATCCAAGCATGCGTGATCAACAAATTTTAGAAAAGATGATTGATGATGCT AAAAATTGGACGCGTACTTTTACAAGTGATAAAAATTTTTCAGAAGTTTTACATATAATGTTAAGAACTTATATCGCTTT AGCTCAGCGTGCTGATGTAGAGTATACAATGTCGATTTTGGATAATGAACAACCTAATAATTATTTTACTCAGTTATCAA AACTTGATTATGCAGACTATATTTATAATTTAAATGAAAAAGAAAAAGCTGTAAATATTTATGAAAATACTTATTTTAAT ACAAAAAATTTAGATTTAGCTGCAAGAGCAGCTATGAGTTTGGCAAAGAATTTGCTTTCAAATGAGCAAGTAAATAAAGC TATAGAATATATTAATACCATTTTAAAAGCCAATCCTGAATATTTTGGAAAAGATATTCCAAGATCTTTAGAACTTGCTA AATTATTTAATCAAAAGGGACAATTTGATATAAGTGCAAGTATTTATGAAGATGCCTTTGCTAAAATGTCCAAACTTGAT CCAAGTTATGAAGAAACTTTAAAAGATTTAGCCTTGGTTTTATCACATGCTAACAGATCTAGTGATGCTAAAAAATACCT TGATTTGTATATGGATGATTATTTAGATGGTAAGTATTTAGATGAAATTAAAAAAGCAAGTGATGAGGTATTCTTTGCTT TAGGTGATAATAATGCAAGCTTTTTGCATCAGCGTTATACAGATTTAATGAAGCAATATGCAAATAAAGATGAGAATATT GCAAATAAAGCTTTAGATGAAGATGTTGCACTTTATTATAAAGAGGGAAATTTTAGTGCTATTTTAGCTTATAAAGATCT TATAGAAAGTAAAAAAATTCCAAATGCTACTCAATTTTTAGAGAAAGCAGCCATTAATGATTTAAAAAATGCCATAAAAG CTGATAATTGTATCAATGCTGCAAATATTTTTATGCGTTTTAGTGCTTATGATATAGGTCAGAAAATTGAGAATAAAAAA CAAATGTTAGCTTGTCTTATCAGAACTTCTAATGTTGAACAAGCACTTGATTATATAGATAAAAATTATAATGAAGATTC TATATTTTATGGTCTTCAAAAAGCATCTATTCTTTTTGACAATAAACAATATCCTCAGGTGATTAAAATTTCTAAAGACA TAGCTAATTCTAGAATTTTAAAAAGTGATGATGAGAATTTTAAGGCTTATTATTTGCAATTTTTATCTTTATTGCGTTTA AATGACTATAATCAAGCCATTAAAATTTTGCAAATTTTAGAAAGTTTTCCAATGAATTTTAGTATGGTGGAAGCTTATGA TGCTTTACTTTCTTACGCTAATGATCATAATATGCAAACAACTATTTTAACTTACGCACCTAAGGCCATTGACTATCAAA ATTTTAAAGGTATAAATCTTTTTAGTCCTAATTTAGAATTTATATATCTTGATGCTTTGACTAAAATCAATAAAAATGAA GAAAGTTTAGCTGTTTTAACAGATTTACTTAAATTAAAACTTTCAGATGAAGATAGAGCAAGAGCTTTATATATCCAAGC CTTAACTTATGAAAGAATGCAAAATATACAAGCTGAAAAAGAAAGTTTAAAACAATGTCTTGAAATCAAAAGTGCTTCAA ATTGGCAGAATTTATGTAAGAGTAAAAATCAAATTTTAAATCAATAA
Upstream 100 bases:
>100_bases TAAGTTTAGTTTTATACAAAATTTTATTTTAGCTTTTTGTGTTTGTGTAAGCATTTTTGCTATATTGTTAATGTTATAAG AGTTTTGCTATAATTATTTT
Downstream 100 bases:
>100_bases GTAAATTTAGAGATAACTAGCTTTTTGGCTAGTTATCTAAGGTTAAAACCTCTTCTTCTTAACATCTTCTAAGATATTAT TAGCTATATCACTTACTGTA
Product: paralyzed flagella protein PflA
Products: NA
Alternate protein names: Flagellar Functional Protein; Paralysed Flagella Protein PflA; Paralysed Flagellum Protein PflA; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Paralyzed Flagella Protein PflA; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 788; Mature: 788
Protein sequence:
>788_residues MRILFLILLSFLNAFAFELVLNTGRENNQAFAVLHASNDLEFTCQKFITEAKVHFECDIAGMVDNKLKDQSFSAFDLKFI QEAQKIKMIILPKIQARMFDTSQNIYIDKELSSSSSHKSKAFTFIFTPELAPIKDYDGLDFNINFPHESLPYVGALDLNS DPVVIPQSADINTYLRIKKEYDKANYNQVVIDAQNAINRYRGSIFTSEFILYKLRAQNKLYTQDPSMRDQQILEKMIDDA KNWTRTFTSDKNFSEVLHIMLRTYIALAQRADVEYTMSILDNEQPNNYFTQLSKLDYADYIYNLNEKEKAVNIYENTYFN TKNLDLAARAAMSLAKNLLSNEQVNKAIEYINTILKANPEYFGKDIPRSLELAKLFNQKGQFDISASIYEDAFAKMSKLD PSYEETLKDLALVLSHANRSSDAKKYLDLYMDDYLDGKYLDEIKKASDEVFFALGDNNASFLHQRYTDLMKQYANKDENI ANKALDEDVALYYKEGNFSAILAYKDLIESKKIPNATQFLEKAAINDLKNAIKADNCINAANIFMRFSAYDIGQKIENKK QMLACLIRTSNVEQALDYIDKNYNEDSIFYGLQKASILFDNKQYPQVIKISKDIANSRILKSDDENFKAYYLQFLSLLRL NDYNQAIKILQILESFPMNFSMVEAYDALLSYANDHNMQTTILTYAPKAIDYQNFKGINLFSPNLEFIYLDALTKINKNE ESLAVLTDLLKLKLSDEDRARALYIQALTYERMQNIQAEKESLKQCLEIKSASNWQNLCKSKNQILNQ
Sequences:
>Translated_788_residues MRILFLILLSFLNAFAFELVLNTGRENNQAFAVLHASNDLEFTCQKFITEAKVHFECDIAGMVDNKLKDQSFSAFDLKFI QEAQKIKMIILPKIQARMFDTSQNIYIDKELSSSSSHKSKAFTFIFTPELAPIKDYDGLDFNINFPHESLPYVGALDLNS DPVVIPQSADINTYLRIKKEYDKANYNQVVIDAQNAINRYRGSIFTSEFILYKLRAQNKLYTQDPSMRDQQILEKMIDDA KNWTRTFTSDKNFSEVLHIMLRTYIALAQRADVEYTMSILDNEQPNNYFTQLSKLDYADYIYNLNEKEKAVNIYENTYFN TKNLDLAARAAMSLAKNLLSNEQVNKAIEYINTILKANPEYFGKDIPRSLELAKLFNQKGQFDISASIYEDAFAKMSKLD PSYEETLKDLALVLSHANRSSDAKKYLDLYMDDYLDGKYLDEIKKASDEVFFALGDNNASFLHQRYTDLMKQYANKDENI ANKALDEDVALYYKEGNFSAILAYKDLIESKKIPNATQFLEKAAINDLKNAIKADNCINAANIFMRFSAYDIGQKIENKK QMLACLIRTSNVEQALDYIDKNYNEDSIFYGLQKASILFDNKQYPQVIKISKDIANSRILKSDDENFKAYYLQFLSLLRL NDYNQAIKILQILESFPMNFSMVEAYDALLSYANDHNMQTTILTYAPKAIDYQNFKGINLFSPNLEFIYLDALTKINKNE ESLAVLTDLLKLKLSDEDRARALYIQALTYERMQNIQAEKESLKQCLEIKSASNWQNLCKSKNQILNQ >Mature_788_residues MRILFLILLSFLNAFAFELVLNTGRENNQAFAVLHASNDLEFTCQKFITEAKVHFECDIAGMVDNKLKDQSFSAFDLKFI QEAQKIKMIILPKIQARMFDTSQNIYIDKELSSSSSHKSKAFTFIFTPELAPIKDYDGLDFNINFPHESLPYVGALDLNS DPVVIPQSADINTYLRIKKEYDKANYNQVVIDAQNAINRYRGSIFTSEFILYKLRAQNKLYTQDPSMRDQQILEKMIDDA KNWTRTFTSDKNFSEVLHIMLRTYIALAQRADVEYTMSILDNEQPNNYFTQLSKLDYADYIYNLNEKEKAVNIYENTYFN TKNLDLAARAAMSLAKNLLSNEQVNKAIEYINTILKANPEYFGKDIPRSLELAKLFNQKGQFDISASIYEDAFAKMSKLD PSYEETLKDLALVLSHANRSSDAKKYLDLYMDDYLDGKYLDEIKKASDEVFFALGDNNASFLHQRYTDLMKQYANKDENI ANKALDEDVALYYKEGNFSAILAYKDLIESKKIPNATQFLEKAAINDLKNAIKADNCINAANIFMRFSAYDIGQKIENKK QMLACLIRTSNVEQALDYIDKNYNEDSIFYGLQKASILFDNKQYPQVIKISKDIANSRILKSDDENFKAYYLQFLSLLRL NDYNQAIKILQILESFPMNFSMVEAYDALLSYANDHNMQTTILTYAPKAIDYQNFKGINLFSPNLEFIYLDALTKINKNE ESLAVLTDLLKLKLSDEDRARALYIQALTYERMQNIQAEKESLKQCLEIKSASNWQNLCKSKNQILNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90957; Mature: 90957
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILFLILLSFLNAFAFELVLNTGRENNQAFAVLHASNDLEFTCQKFITEAKVHFECDIA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCEEEEEEEEH GMVDNKLKDQSFSAFDLKFIQEAQKIKMIILPKIQARMFDTSQNIYIDKELSSSSSHKSK HHHHCCCCCCCCCHHHHHHHHHHHHCEEEEECCHHHHHCCCCCCEEEECCCCCCCCCCCC AFTFIFTPELAPIKDYDGLDFNINFPHESLPYVGALDLNSDPVVIPQSADINTYLRIKKE EEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEECCCCCCCHHEEEEHH YDKANYNQVVIDAQNAINRYRGSIFTSEFILYKLRAQNKLYTQDPSMRDQQILEKMIDDA HCCCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHH KNWTRTFTSDKNFSEVLHIMLRTYIALAQRADVEYTMSILDNEQPNNYFTQLSKLDYADY HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHCCHHHH IYNLNEKEKAVNIYENTYFNTKNLDLAARAAMSLAKNLLSNEQVNKAIEYINTILKANPE HHCCCCHHHHEEEHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHH YFGKDIPRSLELAKLFNQKGQFDISASIYEDAFAKMSKLDPSYEETLKDLALVLSHANRS HHCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC SDAKKYLDLYMDDYLDGKYLDEIKKASDEVFFALGDNNASFLHQRYTDLMKQYANKDENI HHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHH ANKALDEDVALYYKEGNFSAILAYKDLIESKKIPNATQFLEKAAINDLKNAIKADNCINA HHHHCCCCEEEEEECCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH ANIFMRFSAYDIGQKIENKKQMLACLIRTSNVEQALDYIDKNYNEDSIFYGLQKASILFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHEEEHHHHEEEEC NKQYPQVIKISKDIANSRILKSDDENFKAYYLQFLSLLRLNDYNQAIKILQILESFPMNF CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCH SMVEAYDALLSYANDHNMQTTILTYAPKAIDYQNFKGINLFSPNLEFIYLDALTKINKNE HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEEEHHHHCCCCC ESLAVLTDLLKLKLSDEDRARALYIQALTYERMQNIQAEKESLKQCLEIKSASNWQNLCK HHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SKNQILNQ HHHHHCCC >Mature Secondary Structure MRILFLILLSFLNAFAFELVLNTGRENNQAFAVLHASNDLEFTCQKFITEAKVHFECDIA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCEEEEEEEEH GMVDNKLKDQSFSAFDLKFIQEAQKIKMIILPKIQARMFDTSQNIYIDKELSSSSSHKSK HHHHCCCCCCCCCHHHHHHHHHHHHCEEEEECCHHHHHCCCCCCEEEECCCCCCCCCCCC AFTFIFTPELAPIKDYDGLDFNINFPHESLPYVGALDLNSDPVVIPQSADINTYLRIKKE EEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEECCCCCCCHHEEEEHH YDKANYNQVVIDAQNAINRYRGSIFTSEFILYKLRAQNKLYTQDPSMRDQQILEKMIDDA HCCCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHH KNWTRTFTSDKNFSEVLHIMLRTYIALAQRADVEYTMSILDNEQPNNYFTQLSKLDYADY HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHCCHHHH IYNLNEKEKAVNIYENTYFNTKNLDLAARAAMSLAKNLLSNEQVNKAIEYINTILKANPE HHCCCCHHHHEEEHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHH YFGKDIPRSLELAKLFNQKGQFDISASIYEDAFAKMSKLDPSYEETLKDLALVLSHANRS HHCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC SDAKKYLDLYMDDYLDGKYLDEIKKASDEVFFALGDNNASFLHQRYTDLMKQYANKDENI HHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHH ANKALDEDVALYYKEGNFSAILAYKDLIESKKIPNATQFLEKAAINDLKNAIKADNCINA HHHHCCCCEEEEEECCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH ANIFMRFSAYDIGQKIENKKQMLACLIRTSNVEQALDYIDKNYNEDSIFYGLQKASILFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHEEEHHHHEEEEC NKQYPQVIKISKDIANSRILKSDDENFKAYYLQFLSLLRLNDYNQAIKILQILESFPMNF CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCH SMVEAYDALLSYANDHNMQTTILTYAPKAIDYQNFKGINLFSPNLEFIYLDALTKINKNE HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEEEHHHHCCCCC ESLAVLTDLLKLKLSDEDRARALYIQALTYERMQNIQAEKESLKQCLEIKSASNWQNLCK HHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SKNQILNQ HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA