Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

Click here to switch to the map view.

The map label for this gene is 57238362

Identifier: 57238362

GI number: 57238362

Start: 1397010

End: 1398221

Strand: Reverse

Name: 57238362

Synonym: CJE1504

Alternate gene names: NA

Gene position: 1398221-1397010 (Counterclockwise)

Preceding gene: 57238366

Following gene: 57238353

Centisome position: 78.65

GC content: 27.89

Gene sequence:

>1212_bases
ATGCTCATAAATCAAACCTTTGAAATTGATTCTTGTGATGATGTAGAATTAAATATAAAAAGAACTAGCAAGCTTGAATA
CCGCATTAGTTATGATGATGAAAAAGAGATTAAAGCCATAGTTTTTATAGTGGGTGGTTTTGGAGCTAATGCAAATATTT
CTTTTTTAGATTTTGATAGGGAATATATTGCTAAAAATTTTGATGTTGTAGTGGTACATGTTTTTTATCATTGTTTTTGT
GCAAGACAAAGTATTGATCAAAAGTATAATCCAAAGCTTATTCCCAATCAAGATGATTTAGAGCGTGTAAATGGCATTTT
AAAAAATATTAATTTAGGACATTTATCGGTTAATAAAGATAATTTTGAACAAATTATTCCTCTTATAGAGCAAAAAGTTA
ATGAAATGAAACAAGCAGGTTTGGTTGATGAAAGCCAAAAAATAGAACTTTCTTGTGATTTTATCCCACCCAATGGAGAT
TATCAAAACTATGGCGTTATGGCAGCTATTGATCATATCAATGCTTTAAAAGATTTAGTTAAACGTTTTCCAGAATTTGC
AGATTTACCAAAAATTTATGGGGGGGGGTCTTATGGAGGATACCTATCTTTACTCATAGCAAAAATAGCTCCTTGGTATG
TGGATGGTGTGATTGATAATTCTGGGCCAGCCTTGCCTCCTTTGCAATTTATACTGGGAAGGGAGATTGATTCTCCTGAA
TTTGTTTTTAATTCTAAAGATTTAAATTTATACTGTTTTCTAAAAACCCACTGGACACGTAAAGAGAATTCATCTTATTT
TTTCAATGATGCAAATTATATAATAAGAGTATTATTGAATTTAAAGCATTTGCAAATTTTATCTGATATTTCAAAAAATA
TTATTTTTGTAACTTACCATAGTGTTAAAGATTTTCAAGCACCAGTTAAAGATAAAATTATATTTTATGATATTTTTAAT
ACTTTAGGTTTTGATGCTACTTTAAATTTGATAAAATATGAAAGTCAAGTAGATGGAAGATTTATAAAAGACTTAAATCA
TGGTATGAGAATAAGTGATAAAGCCTTATTTAGAAAAGAACTTCCTTTAATGCTTGAAAAATTACAAAAAAGAAAATCTT
TAATGCAAGAAAATTCCATCTCTTATCCTTGTGGAAATAAAGCATTTACTTTTAAGGATGTAGGAGATAAGTTTGTTTTA
AAATTAAATTAA

Upstream 100 bases:

>100_bases
GATTTTTCATAGTTAAGCCTTGTTTTTGTGTTTTATTTTACTAAAATTTAAGTATAATTGTCTTTAAAATACAATAAAAT
AATGCAAACGGGGTGGAATA

Downstream 100 bases:

>100_bases
TCTTTAACTAGGGCAAATTTATCTTTTTTTAAAGCTTTAAGATTTGCTTTAAGGTATTTTCGTGCATCTATGCACACTAT
GCAAGAATTTGCAAATTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MLINQTFEIDSCDDVELNIKRTSKLEYRISYDDEKEIKAIVFIVGGFGANANISFLDFDREYIAKNFDVVVVHVFYHCFC
ARQSIDQKYNPKLIPNQDDLERVNGILKNINLGHLSVNKDNFEQIIPLIEQKVNEMKQAGLVDESQKIELSCDFIPPNGD
YQNYGVMAAIDHINALKDLVKRFPEFADLPKIYGGGSYGGYLSLLIAKIAPWYVDGVIDNSGPALPPLQFILGREIDSPE
FVFNSKDLNLYCFLKTHWTRKENSSYFFNDANYIIRVLLNLKHLQILSDISKNIIFVTYHSVKDFQAPVKDKIIFYDIFN
TLGFDATLNLIKYESQVDGRFIKDLNHGMRISDKALFRKELPLMLEKLQKRKSLMQENSISYPCGNKAFTFKDVGDKFVL
KLN

Sequences:

>Translated_403_residues
MLINQTFEIDSCDDVELNIKRTSKLEYRISYDDEKEIKAIVFIVGGFGANANISFLDFDREYIAKNFDVVVVHVFYHCFC
ARQSIDQKYNPKLIPNQDDLERVNGILKNINLGHLSVNKDNFEQIIPLIEQKVNEMKQAGLVDESQKIELSCDFIPPNGD
YQNYGVMAAIDHINALKDLVKRFPEFADLPKIYGGGSYGGYLSLLIAKIAPWYVDGVIDNSGPALPPLQFILGREIDSPE
FVFNSKDLNLYCFLKTHWTRKENSSYFFNDANYIIRVLLNLKHLQILSDISKNIIFVTYHSVKDFQAPVKDKIIFYDIFN
TLGFDATLNLIKYESQVDGRFIKDLNHGMRISDKALFRKELPLMLEKLQKRKSLMQENSISYPCGNKAFTFKDVGDKFVL
KLN
>Mature_403_residues
MLINQTFEIDSCDDVELNIKRTSKLEYRISYDDEKEIKAIVFIVGGFGANANISFLDFDREYIAKNFDVVVVHVFYHCFC
ARQSIDQKYNPKLIPNQDDLERVNGILKNINLGHLSVNKDNFEQIIPLIEQKVNEMKQAGLVDESQKIELSCDFIPPNGD
YQNYGVMAAIDHINALKDLVKRFPEFADLPKIYGGGSYGGYLSLLIAKIAPWYVDGVIDNSGPALPPLQFILGREIDSPE
FVFNSKDLNLYCFLKTHWTRKENSSYFFNDANYIIRVLLNLKHLQILSDISKNIIFVTYHSVKDFQAPVKDKIIFYDIFN
TLGFDATLNLIKYESQVDGRFIKDLNHGMRISDKALFRKELPLMLEKLQKRKSLMQENSISYPCGNKAFTFKDVGDKFVL
KLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46372; Mature: 46372

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLINQTFEIDSCDDVELNIKRTSKLEYRISYDDEKEIKAIVFIVGGFGANANISFLDFDR
CCCCCEECCCCCCCCEEEEEECCEEEEEECCCCCCCEEEEEEEEECCCCCCEEEEEECCH
EYIAKNFDVVVVHVFYHCFCARQSIDQKYNPKLIPNQDDLERVNGILKNINLGHLSVNKD
HHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCC
NFEQIIPLIEQKVNEMKQAGLVDESQKIELSCDFIPPNGDYQNYGVMAAIDHINALKDLV
CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
KRFPEFADLPKIYGGGSYGGYLSLLIAKIAPWYVDGVIDNSGPALPPLQFILGREIDSPE
HHCCHHHCCCCCCCCCCCHHHHHHHHHHHCCHHEEEEECCCCCCCCHHHHHHCCCCCCCC
FVFNSKDLNLYCFLKTHWTRKENSSYFFNDANYIIRVLLNLKHLQILSDISKNIIFVTYH
EEEECCCCEEEEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE
SVKDFQAPVKDKIIFYDIFNTLGFDATLNLIKYESQVDGRFIKDLNHGMRISDKALFRKE
CCHHHCCCHHCCEEEEEHHHHHCCCCEEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHH
LPLMLEKLQKRKSLMQENSISYPCGNKAFTFKDVGDKFVLKLN
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEC
>Mature Secondary Structure
MLINQTFEIDSCDDVELNIKRTSKLEYRISYDDEKEIKAIVFIVGGFGANANISFLDFDR
CCCCCEECCCCCCCCEEEEEECCEEEEEECCCCCCCEEEEEEEEECCCCCCEEEEEECCH
EYIAKNFDVVVVHVFYHCFCARQSIDQKYNPKLIPNQDDLERVNGILKNINLGHLSVNKD
HHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCC
NFEQIIPLIEQKVNEMKQAGLVDESQKIELSCDFIPPNGDYQNYGVMAAIDHINALKDLV
CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
KRFPEFADLPKIYGGGSYGGYLSLLIAKIAPWYVDGVIDNSGPALPPLQFILGREIDSPE
HHCCHHHCCCCCCCCCCCHHHHHHHHHHHCCHHEEEEECCCCCCCCHHHHHHCCCCCCCC
FVFNSKDLNLYCFLKTHWTRKENSSYFFNDANYIIRVLLNLKHLQILSDISKNIIFVTYH
EEEECCCCEEEEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE
SVKDFQAPVKDKIIFYDIFNTLGFDATLNLIKYESQVDGRFIKDLNHGMRISDKALFRKE
CCHHHCCCHHCCEEEEEHHHHHCCCCEEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHH
LPLMLEKLQKRKSLMQENSISYPCGNKAFTFKDVGDKFVLKLN
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA