| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is fieF [H]
Identifier: 57237776
GI number: 57237776
Start: 966582
End: 967469
Strand: Reverse
Name: fieF [H]
Synonym: CJE1026
Alternate gene names: 57237776
Gene position: 967469-966582 (Counterclockwise)
Preceding gene: 57237777
Following gene: 57237775
Centisome position: 54.42
GC content: 28.49
Gene sequence:
>888_bases ATGAGTTTGCAAAAAAAAGCAACTCTTGTAGCAAGTTTATGTGCCATTGTTTTAGCCTTGGTTAAATTTATAGTAGGCTT AACAAGTGGTTCTGTTGCAGTACTTTCAAGTGCGATTGATTCTTTAATGGATTTTGCTATTTCTGCTTTTAATTTTTTGG CTCTTAAAAAAAGCTCACAAAAGGCGAATGAAAATTATAATTTTGGTTTTTCTAAAATTGAAGCTTTAATGGGTTTGTTA GAAGGTGTTTTTATAGTTGGCGTGGGGATTTTTATTTTTTATGAGAGTATTTTAAAGATTTATTATAAAGAAGAAATTAA AGATTTAAATTCAAGCATCTATGTGATGATTTTTGCTTTAATTATGACTTTTTTTCTTGTACTTTTTTTAAATTATGTAG CTAAAAAAACCAAAAGTTTAATTATAGAAAGTGATGCTTTGCATTACAAAACAGATTGCTTAACCAATGCTTGTACTTTA GGGGCTTTGGTTTTGATTTATTTTACAAATTTACATATTATTGATGCTATTTTTGGGATAGTGATCAGTCTTTATACGGC ATTTTCTGCTTTTAAAATCATTAAAAAAGCTTTAGCTTTTTTAATGGATGAGGCTTTACCTAAGGAACAAGTGGATAAAA TTTGTACTTTGATTTCTAATAATCCTGAAATAATTTCCTATCATGAATTAAAGACGCGTAAAACTCCAAGTTGTAATTAT TTAAGCGTGCATTTGGTTTTTTGCCCTATAATTTCGCTTTTAAATGCGCATAAAATTTCAGATGAAATAGAAGAAGGTGT GCGTAAGATGTTTGAAAATGAAAAATGGGATATACAAATTCATTTAGATCCTTATGATGATGCAGAACAAGAAAGGCAAA GACAATGA
Upstream 100 bases:
>100_bases CTTTACCTAGTCATAAAATTATAGGAGTAGATGCAAGAGTGTTTTTACGACAAAACGGTTCTTTGCATTGTTCTTGTCAA AATCGTTTCAAAGGTTTAAG
Downstream 100 bases:
>100_bases AAATCGCTTTAATACAACAAAAATTTCATTTAAATAAAGAACAAACTATAAAAAAAACTTGCGAATTTATAGAAGAAGCC TCTAAACAAGGAGCTGAGCT
Product: cation efflux family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSLQKKATLVASLCAIVLALVKFIVGLTSGSVAVLSSAIDSLMDFAISAFNFLALKKSSQKANENYNFGFSKIEALMGLL EGVFIVGVGIFIFYESILKIYYKEEIKDLNSSIYVMIFALIMTFFLVLFLNYVAKKTKSLIIESDALHYKTDCLTNACTL GALVLIYFTNLHIIDAIFGIVISLYTAFSAFKIIKKALAFLMDEALPKEQVDKICTLISNNPEIISYHELKTRKTPSCNY LSVHLVFCPIISLLNAHKISDEIEEGVRKMFENEKWDIQIHLDPYDDAEQERQRQ
Sequences:
>Translated_295_residues MSLQKKATLVASLCAIVLALVKFIVGLTSGSVAVLSSAIDSLMDFAISAFNFLALKKSSQKANENYNFGFSKIEALMGLL EGVFIVGVGIFIFYESILKIYYKEEIKDLNSSIYVMIFALIMTFFLVLFLNYVAKKTKSLIIESDALHYKTDCLTNACTL GALVLIYFTNLHIIDAIFGIVISLYTAFSAFKIIKKALAFLMDEALPKEQVDKICTLISNNPEIISYHELKTRKTPSCNY LSVHLVFCPIISLLNAHKISDEIEEGVRKMFENEKWDIQIHLDPYDDAEQERQRQ >Mature_294_residues SLQKKATLVASLCAIVLALVKFIVGLTSGSVAVLSSAIDSLMDFAISAFNFLALKKSSQKANENYNFGFSKIEALMGLLE GVFIVGVGIFIFYESILKIYYKEEIKDLNSSIYVMIFALIMTFFLVLFLNYVAKKTKSLIIESDALHYKTDCLTNACTLG ALVLIYFTNLHIIDAIFGIVISLYTAFSAFKIIKKALAFLMDEALPKEQVDKICTLISNNPEIISYHELKTRKTPSCNYL SVHLVFCPIISLLNAHKISDEIEEGVRKMFENEKWDIQIHLDPYDDAEQERQRQ
Specific function: Cation-efflux transporter that may have a role in detoxification [H]
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=278, Percent_Identity=32.0143884892086, Blast_Score=176, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 33252; Mature: 33120
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQKKATLVASLCAIVLALVKFIVGLTSGSVAVLSSAIDSLMDFAISAFNFLALKKSSQ CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KANENYNFGFSKIEALMGLLEGVFIVGVGIFIFYESILKIYYKEEIKDLNSSIYVMIFAL HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IMTFFLVLFLNYVAKKTKSLIIESDALHYKTDCLTNACTLGALVLIYFTNLHIIDAIFGI HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VISLYTAFSAFKIIKKALAFLMDEALPKEQVDKICTLISNNPEIISYHELKTRKTPSCNY HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCH LSVHLVFCPIISLLNAHKISDEIEEGVRKMFENEKWDIQIHLDPYDDAEQERQRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCC >Mature Secondary Structure SLQKKATLVASLCAIVLALVKFIVGLTSGSVAVLSSAIDSLMDFAISAFNFLALKKSSQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KANENYNFGFSKIEALMGLLEGVFIVGVGIFIFYESILKIYYKEEIKDLNSSIYVMIFAL HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IMTFFLVLFLNYVAKKTKSLIIESDALHYKTDCLTNACTLGALVLIYFTNLHIIDAIFGI HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VISLYTAFSAFKIIKKALAFLMDEALPKEQVDKICTLISNNPEIISYHELKTRKTPSCNY HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCH LSVHLVFCPIISLLNAHKISDEIEEGVRKMFENEKWDIQIHLDPYDDAEQERQRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA