| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237775
Identifier: 57237775
GI number: 57237775
Start: 965713
End: 966585
Strand: Reverse
Name: 57237775
Synonym: CJE1025
Alternate gene names: NA
Gene position: 966585-965713 (Counterclockwise)
Preceding gene: 57237776
Following gene: 57237773
Centisome position: 54.37
GC content: 33.1
Gene sequence:
>873_bases ATGAAAATCGCTTTAATACAACAAAAATTTCATTTAAATAAAGAACAAACTATAAAAAAAACTTGCGAATTTATAGAAGA AGCCTCTAAACAAGGAGCTGAGCTTGTTTGCTTAGGAGAACTTCATCAAAGTGAGTATTTTTGTCAAAGTGAAAATGTGG ATTTTTTTGACTATGCTAATGATTATGAAAAAGATGTGAAATTTTGGGCAAATATAGCTAGAAAAAATCAAATAGTGCTT ATTGCTTCATTGTTTGAAAAACGAAGTGCCGGACTTTATCATAATACTGCAGTGGTTTTTGAAAAAGATGGTTCTATAGC AGGCAAATATCGCAAAATGCACATACCCGATGATCCTTGTTTTTATGAAAAATTTTATTTTACTCCTGGAGATTTGGGTT TTGAACCTATAAATACAAGTTTAGGTAAGCTTGGAGTGCTTATTTGTTGGGATCAGTGGTATCCTGAAGCAGCAAGAATT ATGGCTTTAAAAGGAGCTGAGATTCTTATTTATCCCACGGCAATTGGTTGGTTTGATAAGGATAAAGATGAAGAAAAACA AAGACAGCTCAATGCTTGGCTTGGCGTACAAAAAGGACATGCTATAGCTAATGGTTTATATGTAGTAGCTATCAATAGGG TAGGTTTTGAAAAAGATGTAAGCGGGGTAGAAGAGGGCATTAGATTTTGGGGAAATTCTTTTGTTTTTGGCCCTCAAGGT GAAGAACTTTGTCTTTTAGATTCTCAAAACGAATGTGTAAAAATCATAGAAATAGATAAAAAAAGAAGTGAAAATGTGCG TCGTTGGTGGCCTTTTTTGCGAGATAGACGCATAGAATATTTTGCAGATTTAACTAAAAGATTTATTGATTAA
Upstream 100 bases:
>100_bases AAATAGAAGAAGGTGTGCGTAAGATGTTTGAAAATGAAAAATGGGATATACAAATTCATTTAGATCCTTATGATGATGCA GAACAAGAAAGGCAAAGACA
Downstream 100 bases:
>100_bases ATCAATAAATCTTATTTGTTTTGTATATTTTCAAGATAGCTTTTTATTTGCTCTTTTTCTTGTTCGTTTAAATTTATAAA ACTTATTTCTTTAAGTCTTG
Product: carbon-nitrogen family hydrolase
Products: NA
Alternate protein names: D-N-alpha-carbamilase [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKIALIQQKFHLNKEQTIKKTCEFIEEASKQGAELVCLGELHQSEYFCQSENVDFFDYANDYEKDVKFWANIARKNQIVL IASLFEKRSAGLYHNTAVVFEKDGSIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPINTSLGKLGVLICWDQWYPEAARI MALKGAEILIYPTAIGWFDKDKDEEKQRQLNAWLGVQKGHAIANGLYVVAINRVGFEKDVSGVEEGIRFWGNSFVFGPQG EELCLLDSQNECVKIIEIDKKRSENVRRWWPFLRDRRIEYFADLTKRFID
Sequences:
>Translated_290_residues MKIALIQQKFHLNKEQTIKKTCEFIEEASKQGAELVCLGELHQSEYFCQSENVDFFDYANDYEKDVKFWANIARKNQIVL IASLFEKRSAGLYHNTAVVFEKDGSIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPINTSLGKLGVLICWDQWYPEAARI MALKGAEILIYPTAIGWFDKDKDEEKQRQLNAWLGVQKGHAIANGLYVVAINRVGFEKDVSGVEEGIRFWGNSFVFGPQG EELCLLDSQNECVKIIEIDKKRSENVRRWWPFLRDRRIEYFADLTKRFID >Mature_290_residues MKIALIQQKFHLNKEQTIKKTCEFIEEASKQGAELVCLGELHQSEYFCQSENVDFFDYANDYEKDVKFWANIARKNQIVL IASLFEKRSAGLYHNTAVVFEKDGSIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPINTSLGKLGVLICWDQWYPEAARI MALKGAEILIYPTAIGWFDKDKDEEKQRQLNAWLGVQKGHAIANGLYVVAINRVGFEKDVSGVEEGIRFWGNSFVFGPQG EELCLLDSQNECVKIIEIDKKRSENVRRWWPFLRDRRIEYFADLTKRFID
Specific function: The enzyme catalyzes the hydrolysis of N-carbamoyl-D- amino acids to the corresponding which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=287, Percent_Identity=29.2682926829268, Blast_Score=118, Evalue=5e-27, Organism=Homo sapiens, GI7706509, Length=305, Percent_Identity=25.2459016393443, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI297632348, Length=296, Percent_Identity=26.0135135135135, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI5031947, Length=296, Percent_Identity=26.0135135135135, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI297632350, Length=296, Percent_Identity=26.0135135135135, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI297632346, Length=185, Percent_Identity=27.5675675675676, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17533173, Length=305, Percent_Identity=27.2131147540984, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17556280, Length=288, Percent_Identity=25.6944444444444, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323383, Length=297, Percent_Identity=26.9360269360269, Blast_Score=103, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6322335, Length=316, Percent_Identity=23.7341772151899, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI21358471, Length=289, Percent_Identity=28.719723183391, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI21355835, Length=295, Percent_Identity=25.7627118644068, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI17933642, Length=286, Percent_Identity=22.027972027972, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.1.77 [H]
Molecular weight: Translated: 33700; Mature: 33700
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIALIQQKFHLNKEQTIKKTCEFIEEASKQGAELVCLGELHQSEYFCQSENVDFFDYAN CEEEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHCCCCEECCCCCCHHHCCC DYEKDVKFWANIARKNQIVLIASLFEKRSAGLYHNTAVVFEKDGSIAGKYRKMHIPDDPC CHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCEECEEEEEECCCCCCCCEEEEECCCCCC FYEKFYFTPGDLGFEPINTSLGKLGVLICWDQWYPEAARIMALKGAEILIYPTAIGWFDK EEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHEEEECCCEEEEEEEEECCCCC DKDEEKQRQLNAWLGVQKGHAIANGLYVVAINRVGFEKDVSGVEEGIRFWGNSFVFGPQG CCCHHHHHHHHHHHCCCCCCHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCC EELCLLDSQNECVKIIEIDKKRSENVRRWWPFLRDRRIEYFADLTKRFID CEEEEECCCCCEEEEEEECCHHCCCHHHHHHHHHHCHHHHHHHHHHHHCC >Mature Secondary Structure MKIALIQQKFHLNKEQTIKKTCEFIEEASKQGAELVCLGELHQSEYFCQSENVDFFDYAN CEEEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHCCCCEECCCCCCHHHCCC DYEKDVKFWANIARKNQIVLIASLFEKRSAGLYHNTAVVFEKDGSIAGKYRKMHIPDDPC CHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCEECEEEEEECCCCCCCCEEEEECCCCCC FYEKFYFTPGDLGFEPINTSLGKLGVLICWDQWYPEAARIMALKGAEILIYPTAIGWFDK EEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHEEEECCCEEEEEEEEECCCCC DKDEEKQRQLNAWLGVQKGHAIANGLYVVAINRVGFEKDVSGVEEGIRFWGNSFVFGPQG CCCHHHHHHHHHHHCCCCCCHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCC EELCLLDSQNECVKIIEIDKKRSENVRRWWPFLRDRRIEYFADLTKRFID CEEEEECCCCCEEEEEEECCHHCCCHHHHHHHHHHCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9648217; 10903946 [H]