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The map label for this gene is 57237773

Identifier: 57237773

GI number: 57237773

Start: 962963

End: 964306

Strand: Reverse

Name: 57237773

Synonym: CJE1023

Alternate gene names: NA

Gene position: 964306-962963 (Counterclockwise)

Preceding gene: 57237775

Following gene: 57237772

Centisome position: 54.24

GC content: 26.34

Gene sequence:

>1344_bases
ATGCTTGATAAACTAGAAAAAATTTTAGCTTATGATAATGTTTTTTTAAGTGGTGGCGCTGGAGTTGGTAAAAGCTTTTT
GACAAATGAGCTTATCAAATCTTATAGAAAACAAAAAAAATTAGCCATAGCTCTTGGTTCTAGTGCTCTATCGGCGTTTA
ATATAGGCGGTGTTACTTTACACAGCTTTTTTTGTTTAGGGTATTGTGATGATATGATGAAATTAAGCGCATTGGATCGC
AATCAAAAACAAAAAGAAAAATTAACAAAACTTAAAGAGCTTTTAAAAACGATTGAGCTTATTATTATCGATGAAATTTC
CATGGTTAGCGCAAATGTTTTTGAAATGATAGGCTTTAGACTTAAAAATTCTCAATTTAATGGAAAAATTTTAGTTGTTG
GAGATTTTTTTCAACTGCCTCCAGTAATTAAAGAAAAAAAAGAAACTTTATTTAACCATTCTTATTATGCTTTTTCTTCA
TTTTTTTGGCAAGATTTAAATTTTAAGAATATTAAACTTTCTCAACCTAAAAGAACGCAAAATATGGAATTTTATAACCA
TTTATCTTTGATTAGACAAGGTTTTTTAGATGAAAAAATTTTAAGCTTTTTTGAATCTTTGCGAATTGATTATAAAGAAT
TAGAAAATTTAGAAGATGATTATACTTTACTTTGTGGTATCAATAAAAAAGTAAACAATATCAATCAAGAAAAATTAAGC
AAACTTGAGACCCCGCTTGTATGCTTTAAGGCTCAGGTTAAAAAAGAAGATAAGAGAATAAAAGATGAAGAGCTTGATTC
TTGGATTAGAAGCTTAAATATATTGGAAGAATTAAATATTAAAATAGGCGCTCGTATTATTTTTTGCGTAAATAATTGGG
ATAAAAATTATTATAATGGAGAGCAAGGTATTATAGAAGATATTCTTTATGAAGAGGAGAAAATTTATATTAGCATTATT
AAAAATAATGGGATGAAAATTTTACTTGAACCTTATACTTTTTTCATGGAAGAACTTGAGCAATCAGGTAAAGATTTTGT
TGTTAATATTCTCGCAAGTGTTACACAGTTTCCTATTAAATTAGCTTATGCTATTACTATACACAAATCACAAGGTATGA
GTATTGAAAAATTAGTGTGTGATATTGATCATATTTTTGAAAATGGACAGCTTTATGTCGCTCTTTCTCGCGCTACAAAC
CCAAATACTTTAAAAATTTATTCTACAAAAAAGATAAATTTTGGATTTTATTTTGCTAATATTTTAAAAATAGATTCTAA
TGTGATTGAATTTTATAAAAAACATAATTTTTTAGATCTCGAAATACAAGAACAAATTATTTAA

Upstream 100 bases:

>100_bases
AACAAGCTGTTAAAAATAGCACTATAAAAGTAAAATATAAACAAGATTTCATAATCAACCTTTTAGAAAAAATAGTTATA
ATTAAAGCTAAGGAAATATA

Downstream 100 bases:

>100_bases
AGGCATTAAATGAAAAAAATATTTTTAAGTGTTTTTTTGGTTTTGAGTTTAAATGCTCAAAATCTTGAAATAGATAAAAT
AAGAACAGATTTGTATTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain Protein; Helicase; TPR Domain-Containing Protein; Exonuclease V Subunit Alpha; 5-3' DNA Helicase; Helicase-Related Protein; ATPase; Aaa ATPase; Glycosysltransferase; Hrdc Domain Protein; Helicase-Family Protein; Helicase Protein; HRDC Domain Protein; RecD-Like Exodeoxyribonuclease V Alpha Chain; RRM3/PIF1 Helicase-Like Protein; ATP-Dependent ExoDNAse Alpha Subunit; DNA Helicase AAA ATPase; DNA Helicase/AAA ATPase

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MLDKLEKILAYDNVFLSGGAGVGKSFLTNELIKSYRKQKKLAIALGSSALSAFNIGGVTLHSFFCLGYCDDMMKLSALDR
NQKQKEKLTKLKELLKTIELIIIDEISMVSANVFEMIGFRLKNSQFNGKILVVGDFFQLPPVIKEKKETLFNHSYYAFSS
FFWQDLNFKNIKLSQPKRTQNMEFYNHLSLIRQGFLDEKILSFFESLRIDYKELENLEDDYTLLCGINKKVNNINQEKLS
KLETPLVCFKAQVKKEDKRIKDEELDSWIRSLNILEELNIKIGARIIFCVNNWDKNYYNGEQGIIEDILYEEEKIYISII
KNNGMKILLEPYTFFMEELEQSGKDFVVNILASVTQFPIKLAYAITIHKSQGMSIEKLVCDIDHIFENGQLYVALSRATN
PNTLKIYSTKKINFGFYFANILKIDSNVIEFYKKHNFLDLEIQEQII

Sequences:

>Translated_447_residues
MLDKLEKILAYDNVFLSGGAGVGKSFLTNELIKSYRKQKKLAIALGSSALSAFNIGGVTLHSFFCLGYCDDMMKLSALDR
NQKQKEKLTKLKELLKTIELIIIDEISMVSANVFEMIGFRLKNSQFNGKILVVGDFFQLPPVIKEKKETLFNHSYYAFSS
FFWQDLNFKNIKLSQPKRTQNMEFYNHLSLIRQGFLDEKILSFFESLRIDYKELENLEDDYTLLCGINKKVNNINQEKLS
KLETPLVCFKAQVKKEDKRIKDEELDSWIRSLNILEELNIKIGARIIFCVNNWDKNYYNGEQGIIEDILYEEEKIYISII
KNNGMKILLEPYTFFMEELEQSGKDFVVNILASVTQFPIKLAYAITIHKSQGMSIEKLVCDIDHIFENGQLYVALSRATN
PNTLKIYSTKKINFGFYFANILKIDSNVIEFYKKHNFLDLEIQEQII
>Mature_447_residues
MLDKLEKILAYDNVFLSGGAGVGKSFLTNELIKSYRKQKKLAIALGSSALSAFNIGGVTLHSFFCLGYCDDMMKLSALDR
NQKQKEKLTKLKELLKTIELIIIDEISMVSANVFEMIGFRLKNSQFNGKILVVGDFFQLPPVIKEKKETLFNHSYYAFSS
FFWQDLNFKNIKLSQPKRTQNMEFYNHLSLIRQGFLDEKILSFFESLRIDYKELENLEDDYTLLCGINKKVNNINQEKLS
KLETPLVCFKAQVKKEDKRIKDEELDSWIRSLNILEELNIKIGARIIFCVNNWDKNYYNGEQGIIEDILYEEEKIYISII
KNNGMKILLEPYTFFMEELEQSGKDFVVNILASVTQFPIKLAYAITIHKSQGMSIEKLVCDIDHIFENGQLYVALSRATN
PNTLKIYSTKKINFGFYFANILKIDSNVIEFYKKHNFLDLEIQEQII

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI82546872, Length=452, Percent_Identity=25, Blast_Score=135, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI25143421, Length=442, Percent_Identity=28.2805429864253, Blast_Score=131, Evalue=8e-31,
Organism=Saccharomyces cerevisiae, GI6321820, Length=499, Percent_Identity=27.4549098196393, Blast_Score=123, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6323579, Length=375, Percent_Identity=27.4666666666667, Blast_Score=103, Evalue=5e-23,
Organism=Drosophila melanogaster, GI19920652, Length=455, Percent_Identity=28.3516483516484, Blast_Score=148, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51906; Mature: 51906

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKLEKILAYDNVFLSGGAGVGKSFLTNELIKSYRKQKKLAIALGSSALSAFNIGGVTL
CHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCHHHHHHCCCCHHH
HSFFCLGYCDDMMKLSALDRNQKQKEKLTKLKELLKTIELIIIDEISMVSANVFEMIGFR
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH
LKNSQFNGKILVVGDFFQLPPVIKEKKETLFNHSYYAFSSFFWQDLNFKNIKLSQPKRTQ
EECCCCCCEEEEEECHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCCCCCC
NMEFYNHLSLIRQGFLDEKILSFFESLRIDYKELENLEDDYTLLCGINKKVNNINQEKLS
CHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCHHHCCCCHHHHH
KLETPLVCFKAQVKKEDKRIKDEELDSWIRSLNILEELNIKIGARIIFCVNNWDKNYYNG
HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCEEEEEEECCCCCCCCC
EQGIIEDILYEEEKIYISIIKNNGMKILLEPYTFFMEELEQSGKDFVVNILASVTQFPIK
CCHHHHHHHHCCCEEEEEEEECCCCEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHCCEE
LAYAITIHKSQGMSIEKLVCDIDHIFENGQLYVALSRATNPNTLKIYSTKKINFGFYFAN
EEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEEEEEHEEEEH
ILKIDSNVIEFYKKHNFLDLEIQEQII
HHHHHHHHHHHHHHCCCEEEEECCCCC
>Mature Secondary Structure
MLDKLEKILAYDNVFLSGGAGVGKSFLTNELIKSYRKQKKLAIALGSSALSAFNIGGVTL
CHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCHHHHHHCCCCHHH
HSFFCLGYCDDMMKLSALDRNQKQKEKLTKLKELLKTIELIIIDEISMVSANVFEMIGFR
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH
LKNSQFNGKILVVGDFFQLPPVIKEKKETLFNHSYYAFSSFFWQDLNFKNIKLSQPKRTQ
EECCCCCCEEEEEECHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCCCCCC
NMEFYNHLSLIRQGFLDEKILSFFESLRIDYKELENLEDDYTLLCGINKKVNNINQEKLS
CHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCHHHCCCCHHHHH
KLETPLVCFKAQVKKEDKRIKDEELDSWIRSLNILEELNIKIGARIIFCVNNWDKNYYNG
HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCEEEEEEECCCCCCCCC
EQGIIEDILYEEEKIYISIIKNNGMKILLEPYTFFMEELEQSGKDFVVNILASVTQFPIK
CCHHHHHHHHCCCEEEEEEEECCCCEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHCCEE
LAYAITIHKSQGMSIEKLVCDIDHIFENGQLYVALSRATNPNTLKIYSTKKINFGFYFAN
EEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEEEEEHEEEEH
ILKIDSNVIEFYKKHNFLDLEIQEQII
HHHHHHHHHHHHHHCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA