| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is secA [H]
Identifier: 57237770
GI number: 57237770
Start: 959025
End: 961613
Strand: Reverse
Name: secA [H]
Synonym: CJE1020
Alternate gene names: 57237770
Gene position: 961613-959025 (Counterclockwise)
Preceding gene: 57237772
Following gene: 57237769
Centisome position: 54.09
GC content: 33.1
Gene sequence:
>2589_bases ATGTTTTTAAATACTTTAAAAGCCGTGTTTGGCACAAAAAATGATCGTGAAGTTAAGAAATATTTCAAGCGTGTAGCACA AATCAATGCTTTAGAAGGCAACTATCAAAATTTAAGCGATGATGAATTAAAAGCCGAATTTGCAAAATTTAAAGAGCAAA TTTTAAGCGGAGAAAAAAACGAAAATGATGTTTTAAATGATGTTTTTGCTATAGTCAGAGAGACAGGTAAGAGAACTTTA AATATGCGTCATTTTGATGTGCAGTTAATCGGTGGTATGGTTTTGCACGATGGAAAAATCGCAGAAATGAAAACAGGAGA AGGTAAAACTCTTGTAGCAACCTTACCTGTTGTTTTAAATGCCATGAGTGGCAAAGGCGTACATGTCGTTACAGTAAATG ATTATCTAGCCAAAAGAGATGCTGAGCAAATGAGTGCGATTTATAATTTTTTAGGTTTTAGTGTTGGCGTGGTGCTTTCT TCTCAAAATAGTGATATAGAACACAAGCAAGCTTATGATTGTGATATTACTTATGGAACCAATAATGAGTTTGGTTTTGA TTATTTGCGTGATAATATGAAATTTTCAAAAGCTGAAAAAGTTCAAAGAGAGCATAATTTTGTTATCGTAGATGAAGTAG ATAGTATTTTAATTGATGAGGCAAGAACTCCGCTTATCATCAGTGGTCCTACAAATCGTACTTTAGATGGTTATATTAAA GCCAATGAAGTAGCTAAACAAATGCAAAAAGGTGAAGCAGTTTTACCCCCTGCAAAACCTGAGGGTGATTTTGTAGTAGA TGAGAAAAATCGTAATATTTTAATTACAGAAGCAGGTATTGCTAAGGCTGAAAAACTTTTTGGCGTAGAAAATTTATACA GTCTTGATAATGCTATCTTAGCTCATCAGCTTGATCAAGCCTTAAAAGCACATAATCTTTTTGAAAAAGATGTGCATTAT GTTTTAAGAAATAATGAAGTTATCATTGTTGATGAATTTACAGGGCGTTTAAGCGAAGGACGTCGTTTTAGCGAAGGATT GCATCAAGCTTTAGAAGCTAAAGAAAATGTAAAAATTCAAGAAGAAAGCCAAACTCTAGCAGATATTACTTTTCAAAATT ATTTTAGAATGTACAATAAACTTGCAGGTATGACAGGAACTGCACAAACAGAAGCGACTGAATTTTCTCAAATTTATAGT TTAGATGTTATTTCTATACCGACAAATATTCCTATTAAAAGACAAGATAAAGATGATCTTATCTATAAAACTCAAAATGA AAAATTCAAAGCTGTAATTGAAGAGATTAAAAAAGCCAATGCTAAAGGTCAGCCTGTACTTGTAGGAACCGCAAGTATAG AGCGCAGTGAAGTTTTTCACAATATGCTTGTAAAAGAGAAAATCCCTCATCATGTTTTAAATGCTAAAAATCACGAGCAA GAAGCTTTGATTATCCAAGATGCAGGTAAAAAAGGTGCTGTAACTATCGCTACAAATATGGCAGGTCGTGGTGTGGATAT AAAAATCGATGATGAGATTAGGGCTTTGGGTGGGCTTTATATCATCGGTACAGAAAGACATGAAAGCCGCCGTATTGATA ATCAACTTCGTGGTCGTGCAGGAAGGCAGGGTGATCCTGGAATAAGTCGTTTTTATCTAAGTTTAGAAGATAATCTTTTA AGAATTTTTGGTGGGGATCGTATTAAAAGTATTATGGATCGCTTGGGCATAGAAGAGGGCGAAAGCATAGAATCAAGAAT CGTTACAAGAGCGGTTGAAAATGCGCAAAAAAAAGTTGAAAGCTTGCATTTTGAAAGCAGAAAGCATTTGTTAGAATACG ATGATGTAGCAAATGAACAAAGAAAAACTATTTATCGTTATCGTAATGAGCTTTTAGATGAAAACTATGATATTAGAGCT AAAATTTCTCAAAATATCGCTGAATATAGTGCAAATGTAATGAATGATTATATACTTGATGAGAGCGGTTCTAATGTAAA TTTTGAAAATTTGAAAGCAAAAATTTTATACGAATGTTCAACTCAGATTAGTGAAAAAGATTTTGAGAATTTAAGTGTCA TTGAAATGCAAGACAAGCTAAGTCAAATTCTTGAAAATTCTTATAACGAAAAGATGTCAAGACTTGAGATTAAAGAATTG CGTAATATAGAGCGTATTTTATATTTGCAAGTTTTGGATAATGCTTGGAGAGAGCATTTGTATCAAATGGATATTTTAAA AACAGGAATAGGGCTTCGTGGATACAATCAAAAAGATCCTCTTGTGGAATATAAGAAAGAAAGTTATAATCTTTTCTTGG AGTTGGTCAATCGTATTAAATTTGATAGTATTAAACTACTTTTTAGCGTGCAATTTAATCAAGAAGAGGTACAAAATTTA GAAAATAAAGCCAATGAAGAAAATGAAAAGCTACTTCAAAGCTCAGTAGAAATGGGCGCAAGCGAAGATAATCTTGGCGA AGCTGAGTTTAAAAAAGTTCCACGCAATGCTCCTTGTCCTTGCGGAAGTGGAAAAAAATTTAAAGAATGCCATGGAAAAA GTGGTCCTAAGCAAGGAATTTTAGCTTGA
Upstream 100 bases:
>100_bases TTTATTTTCCTTAAAAAAATATATTTTTTATGTCATTCTAGCTAATTTTAATTAAATAATCGTTATAATGATAGTTTGAA AAATTTATAAAGGTTTAAAA
Downstream 100 bases:
>100_bases ATAAAAGCGTTTTAAAATATTTACTTTTTAAATATTTAAGATTTGATAAAGAACAACCCTTTATCAATCTTTCTATGCTT TTGGCCTTTTTAGGAGTTTG
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 862; Mature: 862
Protein sequence:
>862_residues MFLNTLKAVFGTKNDREVKKYFKRVAQINALEGNYQNLSDDELKAEFAKFKEQILSGEKNENDVLNDVFAIVRETGKRTL NMRHFDVQLIGGMVLHDGKIAEMKTGEGKTLVATLPVVLNAMSGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVVLS SQNSDIEHKQAYDCDITYGTNNEFGFDYLRDNMKFSKAEKVQREHNFVIVDEVDSILIDEARTPLIISGPTNRTLDGYIK ANEVAKQMQKGEAVLPPAKPEGDFVVDEKNRNILITEAGIAKAEKLFGVENLYSLDNAILAHQLDQALKAHNLFEKDVHY VLRNNEVIIVDEFTGRLSEGRRFSEGLHQALEAKENVKIQEESQTLADITFQNYFRMYNKLAGMTGTAQTEATEFSQIYS LDVISIPTNIPIKRQDKDDLIYKTQNEKFKAVIEEIKKANAKGQPVLVGTASIERSEVFHNMLVKEKIPHHVLNAKNHEQ EALIIQDAGKKGAVTIATNMAGRGVDIKIDDEIRALGGLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLL RIFGGDRIKSIMDRLGIEEGESIESRIVTRAVENAQKKVESLHFESRKHLLEYDDVANEQRKTIYRYRNELLDENYDIRA KISQNIAEYSANVMNDYILDESGSNVNFENLKAKILYECSTQISEKDFENLSVIEMQDKLSQILENSYNEKMSRLEIKEL RNIERILYLQVLDNAWREHLYQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVNRIKFDSIKLLFSVQFNQEEVQNL ENKANEENEKLLQSSVEMGASEDNLGEAEFKKVPRNAPCPCGSGKKFKECHGKSGPKQGILA
Sequences:
>Translated_862_residues MFLNTLKAVFGTKNDREVKKYFKRVAQINALEGNYQNLSDDELKAEFAKFKEQILSGEKNENDVLNDVFAIVRETGKRTL NMRHFDVQLIGGMVLHDGKIAEMKTGEGKTLVATLPVVLNAMSGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVVLS SQNSDIEHKQAYDCDITYGTNNEFGFDYLRDNMKFSKAEKVQREHNFVIVDEVDSILIDEARTPLIISGPTNRTLDGYIK ANEVAKQMQKGEAVLPPAKPEGDFVVDEKNRNILITEAGIAKAEKLFGVENLYSLDNAILAHQLDQALKAHNLFEKDVHY VLRNNEVIIVDEFTGRLSEGRRFSEGLHQALEAKENVKIQEESQTLADITFQNYFRMYNKLAGMTGTAQTEATEFSQIYS LDVISIPTNIPIKRQDKDDLIYKTQNEKFKAVIEEIKKANAKGQPVLVGTASIERSEVFHNMLVKEKIPHHVLNAKNHEQ EALIIQDAGKKGAVTIATNMAGRGVDIKIDDEIRALGGLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLL RIFGGDRIKSIMDRLGIEEGESIESRIVTRAVENAQKKVESLHFESRKHLLEYDDVANEQRKTIYRYRNELLDENYDIRA KISQNIAEYSANVMNDYILDESGSNVNFENLKAKILYECSTQISEKDFENLSVIEMQDKLSQILENSYNEKMSRLEIKEL RNIERILYLQVLDNAWREHLYQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVNRIKFDSIKLLFSVQFNQEEVQNL ENKANEENEKLLQSSVEMGASEDNLGEAEFKKVPRNAPCPCGSGKKFKECHGKSGPKQGILA >Mature_862_residues MFLNTLKAVFGTKNDREVKKYFKRVAQINALEGNYQNLSDDELKAEFAKFKEQILSGEKNENDVLNDVFAIVRETGKRTL NMRHFDVQLIGGMVLHDGKIAEMKTGEGKTLVATLPVVLNAMSGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVVLS SQNSDIEHKQAYDCDITYGTNNEFGFDYLRDNMKFSKAEKVQREHNFVIVDEVDSILIDEARTPLIISGPTNRTLDGYIK ANEVAKQMQKGEAVLPPAKPEGDFVVDEKNRNILITEAGIAKAEKLFGVENLYSLDNAILAHQLDQALKAHNLFEKDVHY VLRNNEVIIVDEFTGRLSEGRRFSEGLHQALEAKENVKIQEESQTLADITFQNYFRMYNKLAGMTGTAQTEATEFSQIYS LDVISIPTNIPIKRQDKDDLIYKTQNEKFKAVIEEIKKANAKGQPVLVGTASIERSEVFHNMLVKEKIPHHVLNAKNHEQ EALIIQDAGKKGAVTIATNMAGRGVDIKIDDEIRALGGLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLL RIFGGDRIKSIMDRLGIEEGESIESRIVTRAVENAQKKVESLHFESRKHLLEYDDVANEQRKTIYRYRNELLDENYDIRA KISQNIAEYSANVMNDYILDESGSNVNFENLKAKILYECSTQISEKDFENLSVIEMQDKLSQILENSYNEKMSRLEIKEL RNIERILYLQVLDNAWREHLYQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVNRIKFDSIKLLFSVQFNQEEVQNL ENKANEENEKLLQSSVEMGASEDNLGEAEFKKVPRNAPCPCGSGKKFKECHGKSGPKQGILA
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular mo
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=914, Percent_Identity=49.45295404814, Blast_Score=828, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001650 - InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF00271 Helicase_C; PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 97991; Mature: 97991
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLNTLKAVFGTKNDREVKKYFKRVAQINALEGNYQNLSDDELKAEFAKFKEQILSGEKN CCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC ENDVLNDVFAIVRETGKRTLNMRHFDVQLIGGMVLHDGKIAEMKTGEGKTLVATLPVVLN CHHHHHHHHHHHHHHHHHEECEEEEEEEEECCEEEECCEEEEEECCCCCEEEEEHHHHHH AMSGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVVLSSQNSDIEHKQAYDCDITYGT HCCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEECC NNEFGFDYLRDNMKFSKAEKVQREHNFVIVDEVDSILIDEARTPLIISGPTNRTLDGYIK CCCCCHHHHHCCCCHHHHHHHHHHCCEEEEECHHHHHHHCCCCCEEEECCCCCCCCCEEE ANEVAKQMQKGEAVLPPAKPEGDFVVDEKNRNILITEAGIAKAEKLFGVENLYSLDNAIL HHHHHHHHHCCCEECCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHCHHHHHHHHHHHH AHQLDQALKAHNLFEKDVHYVLRNNEVIIVDEFTGRLSEGRRFSEGLHQALEAKENVKIQ HHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHCCEEE EESQTLADITFQNYFRMYNKLAGMTGTAQTEATEFSQIYSLDVISIPTNIPIKRQDKDDL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCC IYKTQNEKFKAVIEEIKKANAKGQPVLVGTASIERSEVFHNMLVKEKIPHHVLNAKNHEQ EEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHCCCCCCC EALIIQDAGKKGAVTIATNMAGRGVDIKIDDEIRALGGLYIIGTERHESRRIDNQLRGRA CEEEEEECCCCCCEEEEECCCCCCCEEEECCHHHHHCCEEEEECCCHHHHHHHHHHHCCC GRQGDPGISRFYLSLEDNLLRIFGGDRIKSIMDRLGIEEGESIESRIVTRAVENAQKKVE CCCCCCCCEEEEEEECCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH SLHFESRKHLLEYDDVANEQRKTIYRYRNELLDENYDIRAKISQNIAEYSANVMNDYILD HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCC ESGSNVNFENLKAKILYECSTQISEKDFENLSVIEMQDKLSQILENSYNEKMSRLEIKEL CCCCCCCHHHHHEEEEEEHHHHHCHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH RNIERILYLQVLDNAWREHLYQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVNRIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC FDSIKLLFSVQFNQEEVQNLENKANEENEKLLQSSVEMGASEDNLGEAEFKKVPRNAPCP CCCEEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCC CGSGKKFKECHGKSGPKQGILA CCCCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure MFLNTLKAVFGTKNDREVKKYFKRVAQINALEGNYQNLSDDELKAEFAKFKEQILSGEKN CCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC ENDVLNDVFAIVRETGKRTLNMRHFDVQLIGGMVLHDGKIAEMKTGEGKTLVATLPVVLN CHHHHHHHHHHHHHHHHHEECEEEEEEEEECCEEEECCEEEEEECCCCCEEEEEHHHHHH AMSGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVVLSSQNSDIEHKQAYDCDITYGT HCCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEECC NNEFGFDYLRDNMKFSKAEKVQREHNFVIVDEVDSILIDEARTPLIISGPTNRTLDGYIK CCCCCHHHHHCCCCHHHHHHHHHHCCEEEEECHHHHHHHCCCCCEEEECCCCCCCCCEEE ANEVAKQMQKGEAVLPPAKPEGDFVVDEKNRNILITEAGIAKAEKLFGVENLYSLDNAIL HHHHHHHHHCCCEECCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHCHHHHHHHHHHHH AHQLDQALKAHNLFEKDVHYVLRNNEVIIVDEFTGRLSEGRRFSEGLHQALEAKENVKIQ HHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHCCEEE EESQTLADITFQNYFRMYNKLAGMTGTAQTEATEFSQIYSLDVISIPTNIPIKRQDKDDL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCC IYKTQNEKFKAVIEEIKKANAKGQPVLVGTASIERSEVFHNMLVKEKIPHHVLNAKNHEQ EEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHCCCCCCC EALIIQDAGKKGAVTIATNMAGRGVDIKIDDEIRALGGLYIIGTERHESRRIDNQLRGRA CEEEEEECCCCCCEEEEECCCCCCCEEEECCHHHHHCCEEEEECCCHHHHHHHHHHHCCC GRQGDPGISRFYLSLEDNLLRIFGGDRIKSIMDRLGIEEGESIESRIVTRAVENAQKKVE CCCCCCCCEEEEEEECCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH SLHFESRKHLLEYDDVANEQRKTIYRYRNELLDENYDIRAKISQNIAEYSANVMNDYILD HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCC ESGSNVNFENLKAKILYECSTQISEKDFENLSVIEMQDKLSQILENSYNEKMSRLEIKEL CCCCCCCHHHHHEEEEEEHHHHHCHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH RNIERILYLQVLDNAWREHLYQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVNRIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC FDSIKLLFSVQFNQEEVQNLENKANEENEKLLQSSVEMGASEDNLGEAEFKKVPRNAPCP CCCEEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCC CGSGKKFKECHGKSGPKQGILA CCCCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA