Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is usg [H]
Identifier: 159184963
GI number: 159184963
Start: 1862712
End: 1862978
Strand: Direct
Name: usg [H]
Synonym: Atu1882
Alternate gene names: 159184963
Gene position: 1862712-1862978 (Clockwise)
Preceding gene: 15889180
Following gene: 15889182
Centisome position: 65.55
GC content: 55.81
Gene sequence:
>267_bases ATGAACAAGGAAATGGAAATGATGCTGAGAGGCTACGGCCTCACCACCGCGCAAATATTCTATCGCATGCCGGACCATCC ACTGGTTCTCCAGACCTATGTCTGGCAGGACTATGATCTCGCCCCGGACTTCCCCGAAATGCATGGTTTCCTCAAATTCT GGCAGGAAAAGCTCGACGGTCCCCTGCATTCCGTCCGCTACGTGCACCGACAGGTGATCTCCGCGCAGGAATGGCGCGCG CTGAAGGGAGAGTTCATCCTCCACTGA
Upstream 100 bases:
>100_bases GGTCGGTGCCCTTGGCAAGCTTGGATTAACCCTGTCGTGTTCCCATGTCAGATACAGCGGCAATGCTGTGATCGCAATCA TGGATACGGGAACCGCCGTC
Downstream 100 bases:
>100_bases TGCGTCTCGCCACATAAACATTGCGCCCGCCACCGTTGCGGCTTACAGCAAACGTCAACTGATGACGCTGACGGATACCG CACGATGACGAAAAACCAGA
Product: usg protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MNKEMEMMLRGYGLTTAQIFYRMPDHPLVLQTYVWQDYDLAPDFPEMHGFLKFWQEKLDGPLHSVRYVHRQVISAQEWRA LKGEFILH
Sequences:
>Translated_88_residues MNKEMEMMLRGYGLTTAQIFYRMPDHPLVLQTYVWQDYDLAPDFPEMHGFLKFWQEKLDGPLHSVRYVHRQVISAQEWRA LKGEFILH >Mature_88_residues MNKEMEMMLRGYGLTTAQIFYRMPDHPLVLQTYVWQDYDLAPDFPEMHGFLKFWQEKLDGPLHSVRYVHRQVISAQEWRA LKGEFILH
Specific function: Probably necessary for the cotranslation of trpF. It may also function as a subunit or stabilizer of phosphoribosylanthranilate isomerase (trpF) [H]
COG id: COG5425
COG function: function code E; Usg protein, probable subunit of phosphoribosylanthranilate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009354 [H]
Pfam domain/function: PF06233 Usg [H]
EC number: NA
Molecular weight: Translated: 10627; Mature: 10627
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKEMEMMLRGYGLTTAQIFYRMPDHPLVLQTYVWQDYDLAPDFPEMHGFLKFWQEKLDG CCHHHHHHHHHCCCHHHHHHHCCCCCCEEEHEECCCCCCCCCCCHHHHHHHHHHHHHHCC PLHSVRYVHRQVISAQEWRALKGEFILH HHHHHHHHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure MNKEMEMMLRGYGLTTAQIFYRMPDHPLVLQTYVWQDYDLAPDFPEMHGFLKFWQEKLDG CCHHHHHHHHHCCCHHHHHHHCCCCCCEEEHEECCCCCCCCCCCHHHHHHHHHHHHHHCC PLHSVRYVHRQVISAQEWRALKGEFILH HHHHHHHHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2828322; 11259647 [H]