Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184861
Identifier: 159184861
GI number: 159184861
Start: 1645486
End: 1646136
Strand: Direct
Name: 159184861
Synonym: Atu1659
Alternate gene names: NA
Gene position: 1645486-1646136 (Clockwise)
Preceding gene: 159184860
Following gene: 17935555
Centisome position: 57.91
GC content: 58.22
Gene sequence:
>651_bases ATGGTTCTGGCTAGGGCGCCTGAACCGCATGGCGGTGGAAATCGTTTGAATTCCGCCACCATGCGGGTTTATCTCGGGAA AACGCACAAGCACCCCCATCAGAACCGGAGACACACCGTGTCAGATATCTCCGACTATATCGTCTCGCATTTCAAGCGCT CCTCCCGCGAAATCGGCGAGGTGGAACGGCGCATCCTGGAACTGTCGCACCAGAAGAAGCTGGTTTCGAGCGACATCAAT GCGGAATTTTCCGCCGGCGCCAGTTTGGGCGACAGGCTGGCGGATAATATCGCCAAGGTCGGCGGTTCCTGGGGGTTCAT TCTCAGCTTCTGCTTTTTCCTGATCTTCTGGGCCATCATCAACACCATAGTGCTGACCACCCGCGCCTTCGATCCCTACC CCTTCATCTTCCTCAATCTGCTTCTCTCGATGCTGGCCGCCATCCAGGCGCCGATCATCATGATGTCGCAGAACCGACAG GCCGCCCGCGACCGTTTCGAGGCCGCCAAGGACTATGAGGTGAACCTGAAGGCCGAGCTGGAGGTTCTGTCGCTGCATGA AAAGATCGATGTGAAGGTGCTCGCCGAACTGGCGGCACTGCGCCAGGACATCGCCGCCATCCACCACCACGTCACCCGCA AAGACGACTGA
Upstream 100 bases:
>100_bases ATCGCCTGCTGCAATTCGATATGATGTTCGGCGCGCAATATGGCCGCGAGCGTTTCTTCCCCGGCTTTAACTGGCTGCAT GAGGGCGCACCGGCGGTGTG
Downstream 100 bases:
>100_bases CGCGAAAAAACATCTTCCCCGCTTTTCCCCACCCCGCGCCGCACTGTTAGAGTGAACGCAGTCCTGCCGGGTGAACGCCA GACGTGGCGGAAACTAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MVLARAPEPHGGGNRLNSATMRVYLGKTHKHPHQNRRHTVSDISDYIVSHFKRSSREIGEVERRILELSHQKKLVSSDIN AEFSAGASLGDRLADNIAKVGGSWGFILSFCFFLIFWAIINTIVLTTRAFDPYPFIFLNLLLSMLAAIQAPIIMMSQNRQ AARDRFEAAKDYEVNLKAELEVLSLHEKIDVKVLAELAALRQDIAAIHHHVTRKDD
Sequences:
>Translated_216_residues MVLARAPEPHGGGNRLNSATMRVYLGKTHKHPHQNRRHTVSDISDYIVSHFKRSSREIGEVERRILELSHQKKLVSSDIN AEFSAGASLGDRLADNIAKVGGSWGFILSFCFFLIFWAIINTIVLTTRAFDPYPFIFLNLLLSMLAAIQAPIIMMSQNRQ AARDRFEAAKDYEVNLKAELEVLSLHEKIDVKVLAELAALRQDIAAIHHHVTRKDD >Mature_216_residues MVLARAPEPHGGGNRLNSATMRVYLGKTHKHPHQNRRHTVSDISDYIVSHFKRSSREIGEVERRILELSHQKKLVSSDIN AEFSAGASLGDRLADNIAKVGGSWGFILSFCFFLIFWAIINTIVLTTRAFDPYPFIFLNLLLSMLAAIQAPIIMMSQNRQ AARDRFEAAKDYEVNLKAELEVLSLHEKIDVKVLAELAALRQDIAAIHHHVTRKDD
Specific function: Unknown
COG id: COG4420
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24382; Mature: 24382
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLARAPEPHGGGNRLNSATMRVYLGKTHKHPHQNRRHTVSDISDYIVSHFKRSSREIGE CCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VERRILELSHQKKLVSSDINAEFSAGASLGDRLADNIAKVGGSWGFILSFCFFLIFWAII HHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NTIVLTTRAFDPYPFIFLNLLLSMLAAIQAPIIMMSQNRQAARDRFEAAKDYEVNLKAEL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHCCCCCCCHHHHH EVLSLHEKIDVKVLAELAALRQDIAAIHHHVTRKDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVLARAPEPHGGGNRLNSATMRVYLGKTHKHPHQNRRHTVSDISDYIVSHFKRSSREIGE CCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VERRILELSHQKKLVSSDINAEFSAGASLGDRLADNIAKVGGSWGFILSFCFFLIFWAII HHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NTIVLTTRAFDPYPFIFLNLLLSMLAAIQAPIIMMSQNRQAARDRFEAAKDYEVNLKAEL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHCCCCCCCHHHHH EVLSLHEKIDVKVLAELAALRQDIAAIHHHVTRKDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA